RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 METTL23Q86XA0 190 aa12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 BRSK2Q8IWQ3 736 aa12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 CMTM8Q8IZV2 173 aa12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 SPEM1Q8N4L4 309 aa12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 SPPL2BQ8TCT7 592 aa12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 USP28Q96RU2 1077 aa12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 SLC22A12Q96S37 553 aa12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 PKMYT1Q99640 499 aa12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 FAM83CQ9BQN1 747 aa12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 FAM126AQ9BYI3 521 aaPredicted RBP12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 EBF3Q9H4W6 596 aa12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 C8orf33Q9H7E9 229 aaPredicted RBP12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 PDE11AQ9HCR9 933 aa12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 HSFX1Q9UBD0 423 aa12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 STK17AQ9UEE5 414 aa12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 DSEQ9UL01 958 aa12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 USP18Q9UMW8 372 aa12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 MAGED2Q9UNF1 606 aaPredicted RBP12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 CACNA1BQ00975 2339 aa12.45□□□□□ -0.42
PRPF40B-212ENST00000551111 THADAQ6YHU6 1953 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 FRMD3A2A2Y4 597 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 ANTXRLA6NF34 631 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 ATP2C2O75185 946 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 PRPF40AO75400 957 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 GCNT3O95395 438 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 IDEP14735 1019 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 WEE1P30291 646 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 HOXD13P35453 343 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 DDR2Q16832 855 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 SV2CQ496J9 727 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 ARHGAP15Q53QZ3 475 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 FSTL4Q6MZW2 842 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 SV2BQ7L1I2 683 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 THEM5Q8N1Q8 247 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 NOC3LQ8WTT2 800 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 HVCN1Q96D96 273 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 ACCSQ96QU6 501 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 CYP2S1Q96SQ9 504 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 DDX43Q9NXZ2 648 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 OBP2AQ9NY56 170 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 GTF3C4Q9UKN8 822 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 PCDHB5Q9Y5E4 795 aa12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 MAP1BP46821 2468 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-212ENST00000551111 GON4LQ3T8J9 2241 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 ACACBO00763 2458 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 GDF9O60383 454 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 IL18RAPO95256 599 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 CDC25CP30307 473 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 NRLP54845 237 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 BFSP1Q12934 665 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 SIM2Q14190 667 aaPredicted RBP12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 VEPH1Q14D04 833 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 POSTNQ15063 836 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 ITPRIPL2Q3MIP1 535 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 CSGALNACT2Q8N6G5 542 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 CELF5Q8N6W0 485 aaKnown RBP12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 PDILTQ8N807 584 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 OR5B17Q8NGF7 314 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 MTMR12Q9C0I1 747 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 PANK4Q9NVE7 773 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 RBAKQ9NYW8 714 aaPredicted RBP12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 SEL1LQ9UBV2 794 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 CCDC39Q9UFE4 941 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 MTMR6Q9Y217 621 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 NME7Q9Y5B8 376 aa12.43□□□□□ -0.42
PRPF40B-212ENST00000551111 PAPSS2O95340 614 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 FGF19O95750 216 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 EGFP01133 1207 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 KRT19P08727 400 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 GAP43P17677 238 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 PAX3P23760 479 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 LMO2P25791 158 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 POU5F1Q01860 360 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 RUNX3Q13761 415 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 LRRC32Q14392 662 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 SLC39A14Q15043 492 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 CCDC6Q16204 474 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 TAF12Q16514 161 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 SOWAHAQ2M3V2 549 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 INTS6LQ5JSJ4 861 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 DGKKQ5KSL6 1271 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 LAIR1Q6GTX8 287 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 DCP1BQ8IZD4 617 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 FAM160A2Q8N612 972 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 C2orf15Q8WU43 125 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 EZH1Q92800 747 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 ZNF560Q96MR9 790 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 IER2Q9BTL4 223 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 OLFML3Q9NRN5 406 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 TDP1Q9NUW8 608 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 GMEB2Q9UKD1 530 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 SNX9Q9Y5X1 595 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 EPG5Q9HCE0 2579 aa12.42□□□□□ -0.42
PRPF40B-212ENST00000551111 CHD8Q9HCK8 2581 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 CEP192Q8TEP8 1941 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 GABRDO14764 452 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 GARTP22102 1010 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 ABCD1P33897 745 aa12.41□□□□□ -0.42
PRPF40B-212ENST00000551111 STAT6P42226 847 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms