RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 PRPF6O94906 941 aaKnown RBP18.57■□□□□ 0.56
PDCD2-207ENST00000539212 PDCP20941 246 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 MLLT6P55198 1093 aaPredicted RBP18.57■□□□□ 0.56
PDCD2-207ENST00000539212 NLRP12P59046 1061 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 LRRC32Q14392 662 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 POSTNQ15063 836 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 TAF12Q16514 161 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 TXNDC8Q6A555 127 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 TRIM68Q6AZZ1 485 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 PKN3Q6P5Z2 889 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 RALGPS2Q86X27 583 aaPredicted RBP18.57■□□□□ 0.56
PDCD2-207ENST00000539212 DCP1BQ8IZD4 617 aaKnown RBP18.57■□□□□ 0.56
PDCD2-207ENST00000539212 SYCP3Q8IZU3 236 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 SPEM1Q8N4L4 309 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 MAB21L3Q8N8X9 362 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 C2orf15Q8WU43 125 aaKnown RBP18.57■□□□□ 0.56
PDCD2-207ENST00000539212 CHFRQ96EP1 664 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 MSANTD3Q96H12 275 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 MTMR12Q9C0I1 747 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 PDE11AQ9HCR9 933 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 OLFML3Q9NRN5 406 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 PANK4Q9NVE7 773 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 OBP2AQ9NY56 170 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 MAGED2Q9UNF1 606 aaPredicted RBP18.57■□□□□ 0.56
PDCD2-207ENST00000539212 PCDHB5Q9Y5E4 795 aa18.57■□□□□ 0.56
PDCD2-207ENST00000539212 FRMD3A2A2Y4 597 aa18.56■□□□□ 0.56
PDCD2-207ENST00000539212 OTOL1A6NHN0 477 aaPredicted RBP18.56■□□□□ 0.56
PDCD2-207ENST00000539212 PRPF40AO75400 957 aaKnown RBP18.56■□□□□ 0.56
PDCD2-207ENST00000539212 TADA3O75528 432 aa18.56■□□□□ 0.56
PDCD2-207ENST00000539212 F11P03951 625 aa18.56■□□□□ 0.56
PDCD2-207ENST00000539212 KRT19P08727 400 aa18.56■□□□□ 0.56
PDCD2-207ENST00000539212 POU5F1Q01860 360 aaKnown RBP18.56■□□□□ 0.56
PDCD2-207ENST00000539212 SPEM2Q0P670 501 aa18.56■□□□□ 0.56
PDCD2-207ENST00000539212 PPP2R5DQ14738 602 aa18.56■□□□□ 0.56
PDCD2-207ENST00000539212 DDR2Q16832 855 aa18.56■□□□□ 0.56
PDCD2-207ENST00000539212 MAMSTRQ6ZN01 415 aa18.56■□□□□ 0.56
PDCD2-207ENST00000539212 CCDC73Q6ZRK6 1079 aa18.56■□□□□ 0.56
PDCD2-207ENST00000539212 NT5DC4Q86YG4 428 aa18.56■□□□□ 0.56
PDCD2-207ENST00000539212 USP13Q92995 863 aaPredicted RBP18.56■□□□□ 0.56
PDCD2-207ENST00000539212 HPS4Q9NQG7 708 aa18.56■□□□□ 0.56
PDCD2-207ENST00000539212 DDX43Q9NXZ2 648 aaKnown RBP18.56■□□□□ 0.56
PDCD2-207ENST00000539212 SIX4Q9UIU6 781 aa18.56■□□□□ 0.56
PDCD2-207ENST00000539212 GMEB2Q9UKD1 530 aa18.56■□□□□ 0.56
PDCD2-207ENST00000539212 HRO43593 1189 aa18.55■□□□□ 0.56
PDCD2-207ENST00000539212 GARTP22102 1010 aa18.55■□□□□ 0.56
PDCD2-207ENST00000539212 CYP2F1P24903 491 aa18.55■□□□□ 0.56
PDCD2-207ENST00000539212 NRLP54845 237 aa18.55■□□□□ 0.56
PDCD2-207ENST00000539212 TSPY1Q01534 308 aa18.55■□□□□ 0.56
PDCD2-207ENST00000539212 CCINQ13939 588 aa18.55■□□□□ 0.56
PDCD2-207ENST00000539212 INTS6LQ5JSJ4 861 aaKnown RBP18.55■□□□□ 0.56
PDCD2-207ENST00000539212 NAIF1Q69YI7 327 aaPredicted RBP18.55■□□□□ 0.56
PDCD2-207ENST00000539212 CMTM8Q8IZV2 173 aa18.55■□□□□ 0.56
PDCD2-207ENST00000539212 CSGALNACT2Q8N6G5 542 aa18.55■□□□□ 0.56
PDCD2-207ENST00000539212 CELF5Q8N6W0 485 aaKnown RBP18.55■□□□□ 0.56
PDCD2-207ENST00000539212 SECISBP2LQ93073 1101 aaKnown RBP18.55■□□□□ 0.56
PDCD2-207ENST00000539212 PKMYT1Q99640 499 aa18.55■□□□□ 0.56
PDCD2-207ENST00000539212 EBF3Q9H4W6 596 aa18.55■□□□□ 0.56
PDCD2-207ENST00000539212 GKN1Q9NS71 199 aa18.55■□□□□ 0.56
PDCD2-207ENST00000539212 GTF3C4Q9UKN8 822 aa18.55■□□□□ 0.56
PDCD2-207ENST00000539212 SNX9Q9Y5X1 595 aa18.55■□□□□ 0.56
PDCD2-207ENST00000539212 EXTL3O43909 919 aa18.54■□□□□ 0.56
PDCD2-207ENST00000539212 ARSAP15289 507 aa18.54■□□□□ 0.56
PDCD2-207ENST00000539212 WEE1P30291 646 aa18.54■□□□□ 0.56
PDCD2-207ENST00000539212 PNPLA4P41247 253 aa18.54■□□□□ 0.56
PDCD2-207ENST00000539212 SMARCB1Q12824 385 aa18.54■□□□□ 0.56
PDCD2-207ENST00000539212 SLC39A14Q15043 492 aa18.54■□□□□ 0.56
PDCD2-207ENST00000539212 ITPRIPL2Q3MIP1 535 aa18.54■□□□□ 0.56
PDCD2-207ENST00000539212 DGKKQ5KSL6 1271 aa18.54■□□□□ 0.56
PDCD2-207ENST00000539212 TTC16Q8NEE8 873 aa18.54■□□□□ 0.56
PDCD2-207ENST00000539212 OR5B17Q8NGF7 314 aa18.54■□□□□ 0.56
PDCD2-207ENST00000539212 FAM83CQ9BQN1 747 aa18.54■□□□□ 0.56
PDCD2-207ENST00000539212 POLR3BQ9NW08 1133 aaPredicted RBP18.54■□□□□ 0.56
PDCD2-207ENST00000539212 PCDHB13Q9Y5F0 798 aa18.54■□□□□ 0.56
PDCD2-207ENST00000539212 HUS1O60921 280 aa18.53■□□□□ 0.56
PDCD2-207ENST00000539212 AVPR1AP37288 418 aa18.53■□□□□ 0.56
PDCD2-207ENST00000539212 ATXN1P54253 815 aaKnown RBP18.53■□□□□ 0.56
PDCD2-207ENST00000539212 PLCB2Q00722 1185 aa18.53■□□□□ 0.56
PDCD2-207ENST00000539212 SIM2Q14190 667 aaPredicted RBP18.53■□□□□ 0.56
PDCD2-207ENST00000539212 FSTL4Q6MZW2 842 aa18.53■□□□□ 0.56
PDCD2-207ENST00000539212 C1orf228Q6PIY5 440 aa18.53■□□□□ 0.56
PDCD2-207ENST00000539212 CBWD2Q8IUF1 395 aa18.53■□□□□ 0.56
PDCD2-207ENST00000539212 ADGRF2Q8IZF7 708 aa18.53■□□□□ 0.56
PDCD2-207ENST00000539212 GPD1LQ8N335 351 aa18.53■□□□□ 0.56
PDCD2-207ENST00000539212 LRRC52Q8N7C0 313 aa18.53■□□□□ 0.56
PDCD2-207ENST00000539212 LEO1Q8WVC0 666 aaPredicted RBP18.53■□□□□ 0.56
PDCD2-207ENST00000539212 SLC22A12Q96S37 553 aa18.53■□□□□ 0.56
PDCD2-207ENST00000539212 ACBD6Q9BR61 282 aa18.53■□□□□ 0.56
PDCD2-207ENST00000539212 THG1LQ9NWX6 298 aaKnown RBP18.53■□□□□ 0.56
PDCD2-207ENST00000539212 ITGA11Q9UKX5 1188 aa18.53■□□□□ 0.56
PDCD2-207ENST00000539212 RAB23Q9ULC3 237 aa18.53■□□□□ 0.56
PDCD2-207ENST00000539212 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.53■□□□□ 0.56
PDCD2-207ENST00000539212 SPAG17Q6Q759 2223 aa18.52■□□□□ 0.56
PDCD2-207ENST00000539212 ATP2C2O75185 946 aa18.52■□□□□ 0.56
PDCD2-207ENST00000539212 LDHAP00338 332 aaKnown RBP18.52■□□□□ 0.56
PDCD2-207ENST00000539212 TMEM191BP0C7N4 346 aa18.52■□□□□ 0.56
PDCD2-207ENST00000539212 HOXD13P35453 343 aa18.52■□□□□ 0.56
PDCD2-207ENST00000539212 PXNP49023 591 aaPredicted RBP18.52■□□□□ 0.56
PDCD2-207ENST00000539212 PSMC1P62191 440 aaKnown RBP18.52■□□□□ 0.56
PDCD2-207ENST00000539212 MYL7Q01449 175 aa18.52■□□□□ 0.56
PDCD2-207ENST00000539212 RUNX3Q13761 415 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms