RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 P2RY13Q9BPV8 354 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 DUSP15Q9H1R2 295 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 CPSF3Q9UKF6 684 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 DSEQ9UL01 958 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 ZZEF1O43149 2961 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 ABCA7Q8IZY2 2146 aa15.13■□□□□ 0.01
SMARCA4-206ENST00000538456 SPEGQ15772 3267 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 BAHCC1Q9P281 2608 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 TISP43B9A030 160 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 TULP1O00294 542 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 GIPC1O14908 333 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 FAM13AO94988 1023 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 PIGRP01833 764 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 F11P03951 625 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 HMGA1P17096 107 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 PAX3P23760 479 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 GBP1P32455 592 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 TAF6P49848 677 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 NOVA1P51513 510 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 ATP2C1P98194 919 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 AMPD2Q01433 879 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 PSMD2Q13200 908 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 TMEM119Q4V9L6 283 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 SDHAF4Q5VUM1 108 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 MCTP1Q6DN14 999 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 CD302Q8IX05 232 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 C2orf15Q8WU43 125 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 ZHX3Q9H4I2 956 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 KIF9Q9HAQ2 790 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 ZMYM5Q9UJ78 669 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 ODF2LQ9ULJ1 636 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 INVSQ9Y283 1065 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 ATRXP46100 2492 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 THADAQ6YHU6 1953 aa15.12■□□□□ 0.01
SMARCA4-206ENST00000538456 WDFY3Q8IZQ1 3526 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 C4orf47A7E2U8 309 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 C1QTNF9BB2RNN3 333 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 SEC24BO95487 1268 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 APBB3O95704 486 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 CAVIN2O95810 425 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 PROS1P07225 676 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 C1QTNF9P0C862 333 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 DRD1P21728 446 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 DDX6P26196 483 aaKnown RBP eCLIP15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 GJA4P35212 333 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 SMARCB1Q12824 385 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 FOXC1Q12948 553 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 DMC1Q14565 340 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 PDGFRLQ15198 375 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 CPA6Q8N4T0 437 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 MRPS31Q92665 395 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 PI4K2AQ9BTU6 479 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 PARVGQ9HBI0 331 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 TRPC7Q9HCX4 862 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 TMLHEQ9NVH6 421 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 DPP3Q9NY33 737 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 DERAQ9Y315 318 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 PCDHB5Q9Y5E4 795 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 ZFYVE26Q68DK2 2539 aa15.11■□□□□ 0.01
SMARCA4-206ENST00000538456 LNP1A1A4G5 178 aa15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 ANKRD63C9JTQ0 380 aa15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 TRAK2O60296 914 aa15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 PRPF40AO75400 957 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 RHOBTB1O94844 696 aa15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 KRT18P05783 430 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 SPINK2P20155 84 aa15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 DGKEP52429 567 aa15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 ZNF252P-AS1Q0IIN9 211 aa15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 KARSQ15046 597 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 ADALQ6DHV7 355 aa15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 UNQ6494/PRO21346Q6UXR6 183 aa15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 SYT13Q7L8C5 426 aa15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 MON1AQ86VX9 555 aa15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 DCP1BQ8IZD4 617 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 KCTD17Q8N5Z5 321 aa15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 EZH1Q92800 747 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 ZSCAN31Q96LW9 406 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 TPSD1Q9BZJ3 242 aa15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 ECT2Q9H8V3 914 aa15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 SH2B1Q9NRF2 756 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 DUS2Q9NX74 493 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 C2CD2Q9Y426 696 aa15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 WNT6Q9Y6F9 365 aa15.1■□□□□ 0.01
SMARCA4-206ENST00000538456 HELZP42694 1942 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 ANAPC1Q9H1A4 1944 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 BCLAF3A2AJT9 711 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 KPNA7A9QM74 516 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 TADA3O75528 432 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 TSPY1Q01534 308 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 MTF1Q14872 753 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 DDR2Q16832 855 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 SV2CQ496J9 727 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 FBXO43Q4G163 708 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 ZC2HC1CQ53FD0 456 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 RILPL1Q5EBL4 403 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 EFCAB13Q8IY85 973 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 LRRC15Q8TF66 581 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 KCNN1Q92952 543 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 CD101Q93033 1021 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 EXOC4Q96A65 974 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms