RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-223	ENST00000520828	AARS	P49588	968 aa	Known RBP eCLIP	8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	FAM193A	P78312	1265 aa		8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	GFPT1	Q06210	699 aa	Predicted RBP	8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	SLC10A6	Q3KNW5	377 aa		8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	SLC39A12	Q504Y0	691 aa		8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	C2orf27A	Q580R0	203 aa		8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	LYSMD4	Q5XG99	296 aa		8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	RUFY3	Q7L099	469 aa		8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	TMEFF1	Q8IYR6	380 aa		8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	MDGA1	Q8NFP4	955 aa		8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	ADAM32	Q8TC27	787 aa		8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	GIPC2	Q8TF65	315 aa		8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	ATP2A3	Q93084	1043 aa		8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	LRIG1	Q96JA1	1093 aa		8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	LARP6	Q9BRS8	491 aa	Known RBP	8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	TMEM134	Q9H6X4	195 aa		8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	TMEM74B	Q9NUR3	256 aa		8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	DUS2	Q9NX74	493 aa	Known RBP	8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	MBD1	Q9UIS9	605 aa	Predicted RBP	8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	CYP46A1	Q9Y6A2	500 aa		8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	STK36	Q9NRP7	1315 aa		8.75	□□□□□ -1.01
PTK2-223	ENST00000520828	XPOT	O43592	962 aa	Known RBP	8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	RPA1	P27694	616 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	NMT1	P30419	496 aa	Known RBP	8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	LRPAP1	P30533	357 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	P2RY2	P41231	377 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	NPTX2	P47972	431 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	SEC13	P55735	322 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	PEX3	P56589	373 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	NLRP12	P59046	1061 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	SPAG1	Q07617	926 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	C19orf57	Q0VDD7	668 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	NR1H3	Q13133	447 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	DMP1	Q13316	513 aa	Predicted RBP	8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	BYSL	Q13895	437 aa	Known RBP	8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	ZNF268	Q14587	947 aa	Predicted RBP	8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	MTF1	Q14872	753 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	NOLC1	Q14978	699 aa	Known RBP eCLIP	8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	DUOXA1	Q1HG43	343 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	SEZ6	Q53EL9	994 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	SPDYC	Q5MJ68	293 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	TXNDC8	Q6A555	127 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	MON1A	Q86VX9	555 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	TTC16	Q8NEE8	873 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	OLIG1	Q8TAK6	271 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	CEP76	Q8TAP6	659 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	USP33	Q8TEY7	942 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	WHAMM	Q8TF30	809 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	C2orf15	Q8WU43	125 aa	Known RBP	8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	OSCP1	Q8WVF1	389 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	RLN3	Q8WXF3	142 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	WASF1	Q92558	559 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	MRPS31	Q92665	395 aa	Known RBP	8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	FNBP1	Q96RU3	617 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	BCCIP	Q9P287	314 aa	Known RBP eCLIP	8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	PILRB	Q9UKJ0	227 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	MMP17	Q9ULZ9	603 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	UBQLN1	Q9UMX0	589 aa	Known RBP	8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	SLC6A14	Q9UN76	642 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	RAX	Q9Y2V3	346 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	RBM19	Q9Y4C8	960 aa	Known RBP	8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	PCDHB9	Q9Y5E1	797 aa		8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	HELZ2	Q9BYK8	2649 aa	Known RBP	8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	ATXN2	Q99700	1313 aa	Known RBP	8.74	□□□□□ -1.01
PTK2-223	ENST00000520828	NUP205	Q92621	2012 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	WNT7A	O00755	349 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	ABLIM1	O14639	778 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	EPB41L2	O43491	1005 aa	Known RBP	8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	TOM1L1	O75674	476 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	F11	P03951	625 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	CXCL8	P10145	99 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	HOXB1	P14653	301 aa	Predicted RBP	8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	CYP3A5	P20815	502 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	MUT	P22033	750 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	ITPKA	P23677	461 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	PAX3	P23760	479 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	CDR1	P51861	262 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	PPP2R3A	Q06190	1150 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	SMARCB1	Q12824	385 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	STRN3	Q13033	797 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	TRIP6	Q15654	476 aa	Known RBP	8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	CRY1	Q16526	586 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	HAUS3	Q68CZ6	603 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	CCNI2	Q6ZMN8	369 aa	Predicted RBP	8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	TAS1R3	Q7RTX0	852 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	RABEPK	Q7Z6M1	372 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	TMEM150A	Q86TG1	271 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	TMEM130	Q8N3G9	435 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	MINDY1	Q8N5J2	469 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	CCDC33	Q8N5R6	958 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	OR10T2	Q8NGX3	314 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	RIN3	Q8TB24	985 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	MDM1	Q8TC05	714 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	ADAMTS14	Q8WXS8	1223 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	TNFRSF25	Q93038	417 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	ZBTB45	Q96K62	511 aa	Predicted RBP	8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	KRTAP3-3	Q9BYR6	98 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	KRTAP3-2	Q9BYR7	98 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	ZCWPW1	Q9H0M4	648 aa		8.73	□□□□□ -1.01
PTK2-223	ENST00000520828	TMEM60	Q9H2L4	133 aa		8.73	□□□□□ -1.01

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms