RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 NPC1L1Q9UHC9 1359 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 KIF27Q86VH2 1401 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 VWC2LB2RUY7 222 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 TP73O15350 636 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 TUBB4AP04350 444 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 CCDC172P0C7W6 258 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 ALAS1P13196 640 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 DDCP20711 480 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 AGXTP21549 392 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 MTNR1BP49286 362 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 RAB27AP51159 221 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 SLC16A1P53985 500 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 CBX1P83916 185 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 DHX8Q14562 1220 aaKnown RBP4.66□□□□□ -1.66
CMSS1-204ENST00000479555 PCBP2Q15366 365 aaKnown RBP eCLIP4.66□□□□□ -1.66
CMSS1-204ENST00000479555 TXNRD1Q16881 649 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 TMEM240Q5SV17 173 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 CASC1Q6TDU7 716 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 SMC5Q8IY18 1101 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.66□□□□□ -1.66
CMSS1-204ENST00000479555 PIBF1Q8WXW3 757 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 FAM107BQ9H098 131 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 TCF7L1Q9HCS4 588 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 SAP30BPQ9UHR5 308 aaKnown RBP4.66□□□□□ -1.66
CMSS1-204ENST00000479555 ZNF180Q9UJW8 692 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 ANKRD6Q9Y2G4 727 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 THRAP3Q9Y2W1 955 aaKnown RBP4.66□□□□□ -1.66
CMSS1-204ENST00000479555 PAXBP1Q9Y5B6 917 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 CFAP43Q8NDM7 1665 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 AOX1Q06278 1338 aa4.66□□□□□ -1.66
CMSS1-204ENST00000479555 URB2Q14146 1524 aaKnown RBP4.66□□□□□ -1.66
CMSS1-204ENST00000479555 NCOA3Q9Y6Q9 1424 aa4.65□□□□□ -1.66
CMSS1-204ENST00000479555 AQRO60306 1485 aaKnown RBP eCLIP4.65□□□□□ -1.66
CMSS1-204ENST00000479555 MRC2Q9UBG0 1479 aa4.65□□□□□ -1.66
CMSS1-204ENST00000479555 MPPED1O15442 326 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 AKAP10O43572 662 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 ENDOD1O94919 500 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 REC8O95072 547 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 AGFG2O95081 481 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 HNRNPMP52272 730 aaKnown RBP eCLIP4.65□□□□□ -1.67
CMSS1-204ENST00000479555 TPM4P67936 248 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 ATP8B2P98198 1209 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 MGAT2Q10469 447 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 NFE2Q16621 373 aaPredicted RBP4.65□□□□□ -1.67
CMSS1-204ENST00000479555 HSP90AB2PQ58FF8 381 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 ZNF782Q6ZMW2 699 aaPredicted RBP4.65□□□□□ -1.67
CMSS1-204ENST00000479555 RASAL3Q86YV0 1011 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 CHPFQ8IZ52 775 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 CPA6Q8N4T0 437 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 ANKRD7Q92527 254 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 MED15Q96RN5 788 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 PSMD1Q99460 953 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 PAIP2Q9BPZ3 127 aaKnown RBP4.65□□□□□ -1.67
CMSS1-204ENST00000479555 MED4Q9NPJ6 270 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 ZNF277Q9NRM2 450 aaPredicted RBP4.65□□□□□ -1.67
CMSS1-204ENST00000479555 ZIM2Q9NZV7 527 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 IP6K2Q9UHH9 426 aa4.65□□□□□ -1.67
CMSS1-204ENST00000479555 DDX49Q9Y6V7 483 aaKnown RBP4.65□□□□□ -1.67
CMSS1-204ENST00000479555 SETD1BQ9UPS6 1966 aaKnown RBP4.64□□□□□ -1.67
CMSS1-204ENST00000479555 PRAMEF33A0A0G2JMD5 474 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 A0A1W2PS29 197 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 GOLGA6CA6NDK9 693 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 GOLGA6BA6NDN3 693 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 TTC36A6NLP5 189 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 VGLL3A8MV65 326 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 KIF2AO00139 706 aaPredicted RBP4.64□□□□□ -1.67
CMSS1-204ENST00000479555 FZD9O00144 591 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 TEX33O43247 280 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 MARCH6O60337 910 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 PRAMEF10O60809 474 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 RFPL1O75677 317 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 IL33O95760 270 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 IVLP07476 585 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 GOLGA6DP0CG33 693 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 SRGNP10124 158 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 PPP3CBP16298 524 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 WT1P19544 449 aaPredicted RBP4.64□□□□□ -1.67
CMSS1-204ENST00000479555 KLF9Q13886 244 aaPredicted RBP4.64□□□□□ -1.67
CMSS1-204ENST00000479555 EZH2Q15910 746 aaKnown RBP4.64□□□□□ -1.67
CMSS1-204ENST00000479555 MTX3Q5HYI7 312 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 ICE2Q659A1 982 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 FCRLBQ6BAA4 426 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 KRTAP5-11Q6L8G4 156 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 PTF1AQ7RTS3 328 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 FMNL3Q8IVF7 1028 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 MIER2Q8N344 545 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 VGLL2Q8N8G2 317 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 JPH3Q8WXH2 748 aaPredicted RBP4.64□□□□□ -1.67
CMSS1-204ENST00000479555 ZBTB9Q96C00 473 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 HSPBAP1Q96EW2 488 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 LRIG1Q96JA1 1093 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 TEKT5Q96M29 485 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 NUP88Q99567 741 aaPredicted RBP4.64□□□□□ -1.67
CMSS1-204ENST00000479555 CDH19Q9H159 772 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 RWDD1Q9H446 243 aaPredicted RBP4.64□□□□□ -1.67
CMSS1-204ENST00000479555 INTS13Q9NVM9 706 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 GOLGA6AQ9NYA3 693 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 CTTNBP2NLQ9P2B4 639 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 CHPF2Q9P2E5 772 aa4.64□□□□□ -1.67
CMSS1-204ENST00000479555 PNMA8BQ9ULN7 279 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms