RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 CRELD1Q96HD1 420 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 FAM161BQ96MY7 647 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 RUNDC3BQ96NL0 473 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 P2RX7Q99572 595 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 MOV10L1Q9BXT6 1211 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 ST6GALNAC4Q9H4F1 302 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 SLITRK6Q9H5Y7 841 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 KIAA1586Q9HCI6 787 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 PXMP2Q9NR77 195 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 FBXO28Q9NVF7 368 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 DMAC2Q9NW81 257 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 SUCLA2Q9P2R7 463 aaPredicted RBP6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 RASAL2Q9UJF2 1139 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 ZHX2Q9Y6X8 837 aa6.32□□□□□ -1.4
ATPAF1-204ENST00000474020 ZMYM2Q9UBW7 1377 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 NCANO14594 1321 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 MYPNQ86TC9 1320 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 ANKRD62A6NC57 917 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 ERICH4A6NGS2 130 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 MIF4GDA9UHW6 222 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 VWA5AO00534 786 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 NCK2O43639 380 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 CAPN2P17655 700 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 CXCR5P32302 372 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 GBP1P32455 592 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 HOXD13P35453 343 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 USP8P40818 1118 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 GMPSP49915 693 aaPredicted RBP6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 GTF2BQ00403 316 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 SPP2Q13103 211 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 IKZF1Q13422 519 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 KIF22Q14807 665 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 CFAP58Q5T655 872 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 SNRNP48Q6IEG0 339 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 B3GNT9Q6UX72 402 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 ENOSF1Q7L5Y1 443 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 MAEAQ7L5Y9 396 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 ZNF571Q7Z3V5 609 aaPredicted RBP6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 IRF2BP2Q7Z5L9 587 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 MRPL41Q8IXM3 137 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 EXOC8Q8IYI6 725 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 MFSD4AQ8N468 514 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 PHC3Q8NDX5 983 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 ACTRT1Q8TDG2 376 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 AENQ8WTP8 325 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 CLEC4DQ8WXI8 215 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 CAVIN3Q969G5 261 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 COX4I2Q96KJ9 171 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 CEP170P1Q96L14 293 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 NT5C1BQ96P26 610 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 TAAR1Q96RJ0 339 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 WRNIP1Q96S55 665 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 PSMB7Q99436 277 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 SENP7Q9BQF6 1050 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 PDCD2LQ9BRP1 358 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 TLR10Q9BXR5 811 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 TEX13BQ9BXU2 312 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 GLIS2Q9BZE0 524 aaPredicted RBP6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 UBXN6Q9BZV1 441 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 MTFR1LQ9H019 292 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 RAB17Q9H0T7 212 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 ACAD9Q9H845 621 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 ATP6V0A4Q9HBG4 840 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 KMT5AQ9NQR1 393 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 HOXC10Q9NYD6 342 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 HSPBP1Q9NZL4 362 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 FBXO40Q9UH90 709 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 CNOT7Q9UIV1 285 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 HACL1Q9UJ83 578 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 HPCAL4Q9UM19 191 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 TLR6Q9Y2C9 796 aa6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 ZNF646O15015 1829 aaPredicted RBP6.31□□□□□ -1.4
ATPAF1-204ENST00000474020 ZNF536O15090 1300 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 NFASCO94856 1347 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 EMSYQ7Z589 1322 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 IGSF9BQ9UPX0 1349 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 GOLGA6CA6NDK9 693 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 PRR33A8MZF0 331 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 KRIT1O00522 736 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 PMM2O15305 246 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 SLC16A4O15374 487 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 SORBS3O60504 671 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 ZC3H11AO75152 810 aaKnown RBP eCLIP6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 HEXIM1O94992 359 aaKnown RBP6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 GGPS1O95749 300 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 PGRP06401 933 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 GOLGA6DP0CG33 693 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 TRIM49P0CI25 452 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 TRIM49CP0CI26 452 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 COPB2P35606 906 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 LIG4P49917 911 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 PDE6CP51160 858 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 GALCP54803 685 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 NCKAP1LP55160 1127 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 PEX3P56589 373 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 RTP1P59025 263 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 BPIFB4P59827 614 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 GUCY2DQ02846 1103 aa6.3□□□□□ -1.4
ATPAF1-204ENST00000474020 HLTFQ14527 1009 aaKnown RBP eCLIP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms