RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 EXOSC9Q06265 439 aaKnown RBP4.49□□□□□ -1.69
TM9SF3-203ENST00000464654 PIN1Q13526 163 aaPredicted RBP4.49□□□□□ -1.69
TM9SF3-203ENST00000464654 BOP1Q14137 746 aaKnown RBP4.49□□□□□ -1.69
TM9SF3-203ENST00000464654 IQCB1Q15051 598 aa4.49□□□□□ -1.69
TM9SF3-203ENST00000464654 TBCCQ15814 346 aa4.49□□□□□ -1.69
TM9SF3-203ENST00000464654 LONRF3Q496Y0 759 aa4.49□□□□□ -1.69
TM9SF3-203ENST00000464654 CCDC157Q569K6 752 aa4.49□□□□□ -1.69
TM9SF3-203ENST00000464654 VPS53Q5VIR6 699 aa4.49□□□□□ -1.69
TM9SF3-203ENST00000464654 ANKRD16Q6P6B7 361 aa4.49□□□□□ -1.69
TM9SF3-203ENST00000464654 SH2D3CQ8N5H7 860 aa4.49□□□□□ -1.69
TM9SF3-203ENST00000464654 FAM46DQ8NEK8 389 aa4.49□□□□□ -1.69
TM9SF3-203ENST00000464654 FBXO41Q8TF61 875 aa4.49□□□□□ -1.69
TM9SF3-203ENST00000464654 TBC1D5Q92609 795 aa4.49□□□□□ -1.69
TM9SF3-203ENST00000464654 PTDSS2Q9BVG9 487 aa4.49□□□□□ -1.69
TM9SF3-203ENST00000464654 DDX56Q9NY93 547 aaKnown RBP4.49□□□□□ -1.69
TM9SF3-203ENST00000464654 ADAM21Q9UKJ8 722 aa4.49□□□□□ -1.69
TM9SF3-203ENST00000464654 SLC16A3O15427 465 aaKnown RBP4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 PDGFRBP09619 1106 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 CYP2C9P11712 490 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 CHRM3P20309 590 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 MCL1Q07820 350 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 GTF2H3Q13889 308 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 TTF1Q15361 905 aaPredicted RBP4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 SUMO4Q6EEV6 95 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 LAYNQ6UX15 382 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 TMEM108Q6UXF1 575 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 WDR53Q7Z5U6 358 aaPredicted RBP4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 RASAL3Q86YV0 1011 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 GRAMD1CQ8IYS0 662 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 SEMA6DQ8NFY4 1073 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 KLHDC4Q8TBB5 520 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 DIS3LQ8TF46 1054 aaKnown RBP4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 STAG1Q8WVM7 1258 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 SLC46A1Q96NT5 459 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 CGRRF1Q99675 332 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 RHOBTB2Q9BYZ6 727 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 ARHGEF3Q9NR81 526 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 FLRT1Q9NZU1 646 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 DKK3Q9UBP4 350 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 ST3GAL5Q9UNP4 418 aa4.48□□□□□ -1.69
TM9SF3-203ENST00000464654 CGB1A6NKQ9 187 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 LINC01548A6NM66 108 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 DCLK1O15075 740 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 RFPL1O75677 317 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 CT47B1P0C2W7 299 aaPredicted RBP4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 HSPA6P17066 643 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 HDCP19113 662 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 LMO1P25800 156 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 PXNP49023 591 aaPredicted RBP4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 ALDH9A1P49189 494 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 ZNF134P52741 427 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 EPHB1P54762 984 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 WNT3P56703 355 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 IGBP1P78318 339 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 SLC10A2Q12908 348 aaPredicted RBP4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 KHDC1LQ5JSQ8 128 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 AARS2Q5JTZ9 985 aaKnown RBP4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 IFIT1BQ5T764 474 aaKnown RBP4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 ZNF804AQ7Z570 1209 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 DENND1CQ8IV53 801 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 NMRK2Q9NPI5 230 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 SERHLQ9NQF3 203 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 CNNM1Q9NRU3 951 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 PADI4Q9UM07 663 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 SHOC2Q9UQ13 582 aa4.47□□□□□ -1.69
TM9SF3-203ENST00000464654 COL3A1P02461 1466 aaPredicted RBP4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 TARM1B6A8C7 271 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 PPM1DO15297 605 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 AKAP10O43572 662 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 JTBO76095 146 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 UNC5CO95185 931 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 GRPP07492 148 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 FAM163BP0C2L3 166 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 EBLN1P0CF75 366 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 XRCC6P12956 609 aaKnown RBP eCLIP4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 JUPP14923 745 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 NDUFB7P17568 137 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 RAB1AP62820 205 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 SATB1Q01826 763 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 FGL2Q14314 439 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 CEP85Q6P2H3 762 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 AMIGO2Q86SJ2 522 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 CAMKK1Q8N5S9 505 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 PLBD2Q8NHP8 589 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 KBTBD7Q8WVZ9 684 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 JPH3Q8WXH2 748 aaPredicted RBP4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 DPF1Q92782 380 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 MRGPRX1Q96LB2 322 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 SEMA4CQ9C0C4 833 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 CDH19Q9H159 772 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 PIH1D1Q9NWS0 290 aaKnown RBP4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 PCDHA6Q9UN73 950 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 SSX2IPQ9Y2D8 614 aa4.46□□□□□ -1.7
TM9SF3-203ENST00000464654 MANSC4A6NHS7 340 aaPredicted RBP4.45□□□□□ -1.7
TM9SF3-203ENST00000464654 AP1G1O43747 822 aa4.45□□□□□ -1.7
TM9SF3-203ENST00000464654 HNRNPCP07910 306 aaKnown RBP eCLIP4.45□□□□□ -1.75e-6■■■■□ 22.3
TM9SF3-203ENST00000464654 CELA2AP08217 269 aa4.45□□□□□ -1.7
TM9SF3-203ENST00000464654 IL6RP08887 468 aaPredicted RBP4.45□□□□□ -1.7
TM9SF3-203ENST00000464654 U2AF1L5P0DN76 240 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms