RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 MSRB2Q9Y3D2 182 aa12.85□□□□□ -0.35
HCFC1-204ENST00000461098 IGSF10Q6WRI0 2623 aa12.85□□□□□ -0.35
HCFC1-204ENST00000461098 CACNA1EQ15878 2313 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 ANO9A1A5B4 782 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 PIRO00625 290 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 TADA3O75528 432 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 ODC1P11926 461 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 PLS3P13797 630 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 GUCY2CP25092 1073 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 CDC25AP30304 524 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 AMPD2Q01433 879 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 STRN3Q13033 797 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 TRIM29Q14134 588 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 ZNF268Q14587 947 aaPredicted RBP12.84□□□□□ -0.35
HCFC1-204ENST00000461098 VEPH1Q14D04 833 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 PDGFRLQ15198 375 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 C9orf57Q5W0N0 161 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 MON1AQ86VX9 555 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 SNX29Q8TEQ0 813 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 CD101Q93033 1021 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 KIF9Q9HAQ2 790 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 DNM3Q9UQ16 869 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 BPTFQ12830 3046 aa12.84□□□□□ -0.35
HCFC1-204ENST00000461098 MYH11P35749 1972 aa12.83□□□□□ -0.35
HCFC1-204ENST00000461098 FAM221BA6H8Z2 402 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 K7EQS6 105 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 CHRM1P11229 460 aaPredicted RBP12.83□□□□□ -0.36
HCFC1-204ENST00000461098 HNRNPLP14866 589 aaKnown RBP eCLIP12.83□□□□□ -0.36
HCFC1-204ENST00000461098 DDX6P26196 483 aaKnown RBP eCLIP12.83□□□□□ -0.36
HCFC1-204ENST00000461098 GPR15P49685 360 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 PPP2R3AQ06190 1150 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 BFSP1Q12934 665 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 ANKRD1Q15327 319 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 ZNF77Q15935 545 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 UAP1L1Q3KQV9 507 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 USP39Q53GS9 565 aaKnown RBP12.83□□□□□ -0.36
HCFC1-204ENST00000461098 TTC38Q5R3I4 469 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 JADE1Q6IE81 842 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 CYP2U1Q7Z449 544 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 PIP4P1Q86T03 277 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 OLIG1Q8TAK6 271 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 USP33Q8TEY7 942 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 OSCP1Q8WVF1 389 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 KCNN1Q92952 543 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 ACDQ96AP0 544 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 GCNAQ96QF7 691 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 SLC22A12Q96S37 553 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 TMEM74BQ9NUR3 256 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 TMLHEQ9NVH6 421 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 EVLQ9UI08 416 aaPredicted RBP12.83□□□□□ -0.36
HCFC1-204ENST00000461098 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.83□□□□□ -0.36
HCFC1-204ENST00000461098 ADAMTS20P59510 1910 aa12.83□□□□□ -0.36
HCFC1-204ENST00000461098 SPAARA0A1B0GVQ0 90 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 NFICP08651 508 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 TOB1P50616 345 aaPredicted RBP12.82□□□□□ -0.36
HCFC1-204ENST00000461098 NCKAP1LP55160 1127 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 RAD51AP2Q09MP3 1159 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 SEMA3BQ13214 749 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 MTF1Q14872 753 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 GAB4Q2WGN9 574 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 EML3Q32P44 896 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 C11orf74Q86VG3 221 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 FRMD1Q8N878 549 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 MDGA1Q8NFP4 955 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 TSTD1Q8NFU3 115 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 SPPL2BQ8TCT7 592 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 C2orf15Q8WU43 125 aaKnown RBP12.82□□□□□ -0.36
HCFC1-204ENST00000461098 CNOT6LQ96LI5 555 aaKnown RBP12.82□□□□□ -0.36
HCFC1-204ENST00000461098 FNBP1Q96RU3 617 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 TSPAN18Q96SJ8 248 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 CYP2S1Q96SQ9 504 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 TIPINQ9BVW5 301 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 FOXP1Q9H334 677 aaPredicted RBP12.82□□□□□ -0.36
HCFC1-204ENST00000461098 DUS2Q9NX74 493 aaKnown RBP12.82□□□□□ -0.36
HCFC1-204ENST00000461098 WNT6Q9Y6F9 365 aa12.82□□□□□ -0.36
HCFC1-204ENST00000461098 XPOTO43592 962 aaKnown RBP12.81□□□□□ -0.36
HCFC1-204ENST00000461098 PAX3P23760 479 aa12.81□□□□□ -0.36
HCFC1-204ENST00000461098 OPRD1P41143 372 aa12.81□□□□□ -0.36
HCFC1-204ENST00000461098 DHPSP49366 369 aaPredicted RBP12.81□□□□□ -0.36
HCFC1-204ENST00000461098 FAM193AP78312 1265 aa12.81□□□□□ -0.36
HCFC1-204ENST00000461098 SMARCB1Q12824 385 aa12.81□□□□□ -0.36
HCFC1-204ENST00000461098 USP4Q13107 963 aa12.81□□□□□ -0.36
HCFC1-204ENST00000461098 PSMD2Q13200 908 aa12.81□□□□□ -0.36
HCFC1-204ENST00000461098 TAF12Q16514 161 aa12.81□□□□□ -0.36
HCFC1-204ENST00000461098 SOWAHCQ53LP3 525 aaPredicted RBP12.81□□□□□ -0.36
HCFC1-204ENST00000461098 TRIM61Q5EBN2 209 aa12.81□□□□□ -0.36
HCFC1-204ENST00000461098 SDHAF4Q5VUM1 108 aa12.81□□□□□ -0.36
HCFC1-204ENST00000461098 WSCD1Q658N2 575 aa12.81□□□□□ -0.36
HCFC1-204ENST00000461098 ANO7Q6IWH7 933 aa12.81□□□□□ -0.36
HCFC1-204ENST00000461098 CC2D1AQ6P1N0 951 aaPredicted RBP12.81□□□□□ -0.36
HCFC1-204ENST00000461098 TMEM92Q6UXU6 159 aa12.81□□□□□ -0.36
HCFC1-204ENST00000461098 CPA6Q8N4T0 437 aa12.81□□□□□ -0.36
HCFC1-204ENST00000461098 PIGKQ92643 395 aa12.81□□□□□ -0.36
HCFC1-204ENST00000461098 LINC00597Q9H2U6 94 aa12.81□□□□□ -0.36
HCFC1-204ENST00000461098 RPF1Q9H9Y2 349 aaKnown RBP12.81□□□□□ -0.36
HCFC1-204ENST00000461098 ABI2Q9NYB9 513 aaPredicted RBP12.81□□□□□ -0.36
HCFC1-204ENST00000461098 CPSF3Q9UKF6 684 aaKnown RBP12.81□□□□□ -0.36
HCFC1-204ENST00000461098 GPSM3Q9Y4H4 160 aa12.81□□□□□ -0.36
HCFC1-204ENST00000461098 ANAPC1Q9H1A4 1944 aa12.81□□□□□ -0.36
HCFC1-204ENST00000461098 PI4KAP42356 2102 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms