RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 RAP1GAPP47736 663 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 MXI1P50539 228 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 CDH8P55286 799 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 NTHL1P78549 312 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 TSPY1Q01534 308 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 ZP2Q05996 745 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 ENPEPQ07075 957 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 TWF1Q12792 350 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 DPCR1Q3MIW9 517 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 INTS6LQ5JSJ4 861 aaKnown RBP10.79□□□□□ -0.68
RFX3-210ENST00000457373 CYP26C1Q6V0L0 522 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 FRMD5Q7Z6J6 570 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 TCEAL8Q8IYN2 117 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 GJD3Q8N144 294 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 KBTBD7Q8WVZ9 684 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 GLMNQ92990 594 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 CALR3Q96L12 384 aaKnown RBP10.79□□□□□ -0.68
RFX3-210ENST00000457373 ACBD6Q9BR61 282 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 IMPG2Q9BZV3 1241 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 CRISPLD1Q9H336 500 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 METTL14Q9HCE5 456 aaKnown RBP10.79□□□□□ -0.68
RFX3-210ENST00000457373 CD320Q9NPF0 282 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 TMLHEQ9NVH6 421 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 HCFC1R1Q9NWW0 138 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 ABI2Q9NYB9 513 aaPredicted RBP10.79□□□□□ -0.68
RFX3-210ENST00000457373 DACH1Q9UI36 760 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 GTF3C4Q9UKN8 822 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 INSL5Q9Y5Q6 135 aa10.79□□□□□ -0.68
RFX3-210ENST00000457373 DENND4AQ7Z401 1863 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 MYBPHLA2RUH7 354 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 A8MXQ7 604 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 DLL1O00548 723 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 ATP2C2O75185 946 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 TACC1O75410 805 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 AP1G2O75843 785 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 SOAT2O75908 522 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 P4HA1P13674 534 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 PTPN2P17706 415 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 PCSK1P29120 753 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 HOXA9P31269 272 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 GBP2P32456 591 aaPredicted RBP10.78□□□□□ -0.68
RFX3-210ENST00000457373 MCCD1P59942 119 aaPredicted RBP10.78□□□□□ -0.68
RFX3-210ENST00000457373 PSMC1P62191 440 aaKnown RBP10.78□□□□□ -0.68
RFX3-210ENST00000457373 MGAT5BQ3V5L5 792 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 CBWD6Q4V339 395 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 CBWD3Q5JTY5 395 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 CBWD5Q5RIA9 395 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 CCDC183Q5T5S1 534 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 FOXR2Q6PJQ5 311 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 SASS6Q6UVJ0 657 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 NUDT18Q6ZVK8 323 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 RTL10Q7L3V2 364 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 LIMS2Q7Z4I7 341 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 ELMOD1Q8N336 334 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 TTC9BQ8N6N2 239 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 CCDC150Q8NCX0 1101 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 FBXL13Q8NEE6 735 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 SPATA18Q8TC71 538 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 SPPL2BQ8TCT7 592 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 TAF4BQ92750 862 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 SEMA4DQ92854 862 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 ZNF512Q96ME7 567 aaPredicted RBP10.78□□□□□ -0.68
RFX3-210ENST00000457373 MED15Q96RN5 788 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 SEPT5Q99719 369 aaPredicted RBP10.78□□□□□ -0.68
RFX3-210ENST00000457373 SYT15Q9BQS2 421 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 SDCBP2Q9H190 292 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 SMYD3Q9H7B4 428 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 VRTNQ9H8Y1 702 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 WDR6Q9NNW5 1121 aaKnown RBP10.78□□□□□ -0.68
RFX3-210ENST00000457373 RAB20Q9NX57 234 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 TMEM63CQ9P1W3 806 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 DNMT3BQ9UBC3 853 aaKnown RBP10.78□□□□□ -0.68
RFX3-210ENST00000457373 CDH9Q9ULB4 789 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 MAFFQ9ULX9 164 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 YIPF1Q9Y548 306 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 NME7Q9Y5B8 376 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 PCDHB5Q9Y5E4 795 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 CLUHO75153 1309 aa10.78□□□□□ -0.68
RFX3-210ENST00000457373 C2CD4DB7Z1M9 353 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 LOC730098B7Z3J9 87 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 GNA14O95837 355 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 ASS1P00966 412 aaKnown RBP10.77□□□□□ -0.69
RFX3-210ENST00000457373 FAM163BP0C2L3 166 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 CCDC192P0DO97 292 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 HAPLN1P10915 354 aaPredicted RBP10.77□□□□□ -0.69
RFX3-210ENST00000457373 HOXB3P14651 431 aaPredicted RBP10.77□□□□□ -0.69
RFX3-210ENST00000457373 ALDH1A3P47895 512 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 FMO5P49326 533 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 NOP14P78316 857 aaKnown RBP10.77□□□□□ -0.69
RFX3-210ENST00000457373 SMARCB1Q12824 385 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 NFE2Q16621 373 aaPredicted RBP10.77□□□□□ -0.69
RFX3-210ENST00000457373 CCDC142Q17RM4 750 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 RBM43Q6ZSC3 357 aaKnown RBP10.77□□□□□ -0.69
RFX3-210ENST00000457373 GET4Q7L5D6 327 aaPredicted RBP10.77□□□□□ -0.69
RFX3-210ENST00000457373 SPATA2LQ8IUW3 424 aaPredicted RBP10.77□□□□□ -0.69
RFX3-210ENST00000457373 FAM200AQ8TCP9 573 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 GIPC2Q8TF65 315 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 C2orf15Q8WU43 125 aaKnown RBP10.77□□□□□ -0.69
RFX3-210ENST00000457373 SLC35C1Q96A29 364 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 ACSF2Q96CM8 615 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms