RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 LRRC74BQ6ZQY2 392 aa16.59■□□□□ 0.25
COL17A1-202ENST00000369733 PLD3Q8IV08 490 aa16.59■□□□□ 0.25
COL17A1-202ENST00000369733 ZNF786Q8N393 782 aa16.59■□□□□ 0.25
COL17A1-202ENST00000369733 CNDP1Q96KN2 507 aa16.59■□□□□ 0.25
COL17A1-202ENST00000369733 SIK2Q9H0K1 926 aa16.59■□□□□ 0.25
COL17A1-202ENST00000369733 AGAP1Q9UPQ3 857 aa16.59■□□□□ 0.25
COL17A1-202ENST00000369733 CBX6O95503 412 aa16.59■□□□□ 0.25
COL17A1-202ENST00000369733 RRM1P23921 792 aa16.59■□□□□ 0.25
COL17A1-202ENST00000369733 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.59■□□□□ 0.25
COL17A1-202ENST00000369733 NINJ2Q9NZG7 142 aa16.59■□□□□ 0.25
COL17A1-202ENST00000369733 THRAP10827 490 aa16.59■□□□□ 0.25
COL17A1-202ENST00000369733 RFC5P40937 340 aa16.59■□□□□ 0.25
COL17A1-202ENST00000369733 STILQ15468 1287 aa16.59■□□□□ 0.25
COL17A1-202ENST00000369733 IRGCQ6NXR0 463 aa16.59■□□□□ 0.25
COL17A1-202ENST00000369733 TMEM121Q9BTD3 319 aa16.59■□□□□ 0.25
COL17A1-202ENST00000369733 AP5M1Q9H0R1 490 aa16.59■□□□□ 0.25
COL17A1-202ENST00000369733 DNAJC16Q9Y2G8 782 aa16.59■□□□□ 0.25
COL17A1-202ENST00000369733 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.58■□□□□ 0.25
COL17A1-202ENST00000369733 KRT8P05787 483 aa16.58■□□□□ 0.25
COL17A1-202ENST00000369733 SOX11P35716 441 aa16.58■□□□□ 0.25
COL17A1-202ENST00000369733 EMC2Q15006 297 aa16.58■□□□□ 0.25
COL17A1-202ENST00000369733 ERMARDQ5T6L9 678 aa16.58■□□□□ 0.25
COL17A1-202ENST00000369733 CRELD2Q6UXH1 353 aaPredicted RBP16.58■□□□□ 0.25
COL17A1-202ENST00000369733 ADGRA1Q86SQ6 560 aa16.58■□□□□ 0.25
COL17A1-202ENST00000369733 CBWD2Q8IUF1 395 aa16.58■□□□□ 0.25
COL17A1-202ENST00000369733 TBC1D16Q8TBP0 767 aa16.58■□□□□ 0.25
COL17A1-202ENST00000369733 KRT35Q92764 455 aa16.58■□□□□ 0.25
COL17A1-202ENST00000369733 DCLK3Q9C098 648 aa16.58■□□□□ 0.25
COL17A1-202ENST00000369733 NIF3L1Q9GZT8 377 aa16.58■□□□□ 0.25
COL17A1-202ENST00000369733 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.58■□□□□ 0.25
COL17A1-202ENST00000369733 DDX3XO00571 662 aaKnown RBP eCLIP16.58■□□□□ 0.24
COL17A1-202ENST00000369733 PROSCO94903 275 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 PYGMP11217 842 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 XPAP23025 273 aaPredicted RBP16.58■□□□□ 0.24
COL17A1-202ENST00000369733 ZNF662Q6ZS27 426 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 TMPRSS6Q8IU80 811 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 EXD1Q8NHP7 514 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 JADE3Q92613 823 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 IL1RL2Q9HB29 575 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 IGSF9BQ9UPX0 1349 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 OTUD4Q01804 1114 aaKnown RBP16.58■□□□□ 0.24
COL17A1-202ENST00000369733 PPP2R3CQ969Q6 453 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 ILKAPQ9H0C8 392 aaPredicted RBP16.58■□□□□ 0.24
COL17A1-202ENST00000369733 ACAD9Q9H845 621 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 PLEKHA5Q9HAU0 1116 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 COBLL1Q53SF7 1204 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 CDC42EP5Q6NZY7 148 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 CDR2LQ86X02 465 aaPredicted RBP16.58■□□□□ 0.24
COL17A1-202ENST00000369733 MFN1Q8IWA4 741 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 SLC25A41Q8N5S1 370 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 OR9Q1Q8NGQ5 310 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 PNMA5Q96PV4 448 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 COG4Q9H9E3 785 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 ARHGEF38Q9NXL2 777 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 CYP39A1Q9NYL5 469 aa16.58■□□□□ 0.24
COL17A1-202ENST00000369733 SNX3O60493 162 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 RARAP10276 462 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 IYDQ6PHW0 289 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 ARHGAP22Q7Z5H3 698 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 CBWD1Q9BRT8 395 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 SP110Q9HB58 689 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 NSMCE4AQ9NXX6 385 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 DCDC2Q9UHG0 476 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 SHBGP04278 402 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 BNC2Q6ZN30 1099 aaPredicted RBP16.57■□□□□ 0.24
COL17A1-202ENST00000369733 SLC5A5Q92911 643 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 EPAS1Q99814 870 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 CHCHD3Q9NX63 227 aaKnown RBP16.57■□□□□ 0.24
COL17A1-202ENST00000369733 ITSN1Q15811 1721 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 ATP4AP20648 1035 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 R3HDM1Q15032 1099 aaKnown RBP16.57■□□□□ 0.24
COL17A1-202ENST00000369733 MOXD1Q6UVY6 613 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 SPOCD1Q6ZMY3 1216 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 SLC26A11Q86WA9 606 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 TSPAN17Q96FV3 270 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 EGFL8Q99944 293 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 GPR75-ASB3A0A0A6YYF3 556 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 M0R3G1 203 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 FGFR2P21802 821 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 OASLQ15646 514 aaKnown RBP16.57■□□□□ 0.24
COL17A1-202ENST00000369733 LRRC8BQ6P9F7 803 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 TMEM139Q8IV31 216 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 SP8Q8IXZ3 490 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 PDCD6IPQ8WUM4 868 aaKnown RBP16.57■□□□□ 0.24
COL17A1-202ENST00000369733 ZNF669Q96BR6 464 aaPredicted RBP16.57■□□□□ 0.24
COL17A1-202ENST00000369733 PRPF18Q99633 342 aaKnown RBP16.57■□□□□ 0.24
COL17A1-202ENST00000369733 SLC39A10Q9ULF5 831 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 AP4S1Q9Y587 144 aa16.57■□□□□ 0.24
COL17A1-202ENST00000369733 F8W8V4 182 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 STAT5BP51692 787 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 SPP2Q13103 211 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 CIAPIN1Q6FI81 312 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 RNPEPL1Q9HAU8 725 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 KCNH7Q9NS40 1196 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 TSR3Q9UJK0 312 aaKnown RBP16.56■□□□□ 0.24
COL17A1-202ENST00000369733 FCHO1O14526 889 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 PSMD3O43242 534 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 MOCS2O96007 188 aaPredicted RBP16.56■□□□□ 0.24
COL17A1-202ENST00000369733 KLRK1P26718 216 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 LBRQ14739 615 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms