RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 TPTE2Q6XPS3 522 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 ZNF720Q7Z2F6 126 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 LONP2Q86WA8 852 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 VSIG1Q86XK7 387 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 TDRPQ86YL5 185 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 ARHGEF19Q8IW93 802 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 MYCT1Q8N699 235 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 ZNF564Q8TBZ8 553 aaPredicted RBP7.95□□□□□ -1.14
C11orf54-202ENST00000354421 DCAF4Q8WV16 495 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 ZNF837Q96EG3 531 aaPredicted RBP7.95□□□□□ -1.14
C11orf54-202ENST00000354421 UIMC1Q96RL1 719 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 SETDB2Q96T68 719 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 POP1Q99575 1024 aaKnown RBP7.95□□□□□ -1.14
C11orf54-202ENST00000354421 TSC22D3Q99576 134 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 TRAIPQ9BWF2 469 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 STRA6Q9BX79 667 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 DCLK3Q9C098 648 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 CD209Q9NNX6 404 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 MLXIPLQ9NP71 852 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 UBE2TQ9NPD8 197 aaPredicted RBP7.95□□□□□ -1.14
C11orf54-202ENST00000354421 SAR1AQ9NR31 198 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 TMPRSS4Q9NRS4 437 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 CUEDC1Q9NWM3 386 aaPredicted RBP7.95□□□□□ -1.14
C11orf54-202ENST00000354421 ASIC3Q9UHC3 531 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 NARFQ9UHQ1 456 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 LNPEPQ9UIQ6 1025 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 GTF3C4Q9UKN8 822 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 NEU2Q9Y3R4 380 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 PCDHA1Q9Y5I3 950 aa7.95□□□□□ -1.14
C11orf54-202ENST00000354421 COL11A2P13942 1736 aaPredicted RBP7.94□□□□□ -1.14
C11orf54-202ENST00000354421 ZNF646O15015 1829 aaPredicted RBP7.94□□□□□ -1.14
C11orf54-202ENST00000354421 ZNF318Q5VUA4 2279 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 EML1O00423 815 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 MSH4O15457 936 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 LILRA1O75019 489 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 GAS8O95995 478 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 ATF2P15336 505 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 GM2AP17900 193 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 ATP2B4P23634 1241 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 PCK1P35558 622 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 PAPOLAP51003 745 aaKnown RBP7.94□□□□□ -1.14
C11orf54-202ENST00000354421 CYP2J2P51589 502 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 MXRA7P84157 204 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 ZC2HC1CQ53FD0 456 aaPredicted RBP7.94□□□□□ -1.14
C11orf54-202ENST00000354421 SLC45A4Q5BKX6 768 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 TMEM63BQ5T3F8 832 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 TRABD2AQ86V40 505 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 CLEC10AQ8IUN9 316 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 C12orf56Q8IXR9 622 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 SRRM1Q8IYB3 904 aaKnown RBP7.94□□□□□ -1.14
C11orf54-202ENST00000354421 FAM71AQ8IYT1 594 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 ZNF398Q8TD17 642 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 PARD3BQ8TEW8 1205 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 C10orf82Q8WW14 230 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 TEKT4Q8WW24 435 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 C1orf54Q8WWF1 131 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 ERP27Q96DN0 273 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 ZBTB10Q96DT7 871 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 NUDCD1Q96RS6 583 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 HSD17B14Q9BPX1 270 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 NUP85Q9BW27 656 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 TBC1D10AQ9BXI6 508 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 IKZF4Q9H2S9 585 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 DCLRE1BQ9H816 532 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 PARVGQ9HBI0 331 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 CYLDQ9NQC7 956 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 KCND2Q9NZV8 630 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 RALYQ9UKM9 306 aaKnown RBP7.94□□□□□ -1.14
C11orf54-202ENST00000354421 PHTF1Q9UMS5 762 aa7.94□□□□□ -1.14
C11orf54-202ENST00000354421 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.94□□□□□ -1.14
C11orf54-202ENST00000354421 TPRP12270 2363 aaKnown RBP7.94□□□□□ -1.14
C11orf54-202ENST00000354421 SIGLEC16A6NMB1 481 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 SFI1A8K8P3 1242 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 FOXO6A8MYZ6 492 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 FAM86B1E9PN63 330 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 MPHOSPH10O00566 681 aaKnown RBP7.93□□□□□ -1.14
C11orf54-202ENST00000354421 CLDN3O15551 220 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 EXOC3O60645 756 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 LRRN2O75325 713 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 SGPL1O95470 568 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 FAM86B2P0C5J1 330 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 DLATP10515 647 aaKnown RBP7.93□□□□□ -1.14
C11orf54-202ENST00000354421 PTPN4P29074 926 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 SHMT1P34896 483 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 GPC1P35052 558 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 KLC1Q07866 573 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 CETN1Q12798 172 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 PTP4A2Q12974 167 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 TRAF1Q13077 416 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 SPARCL1Q14515 664 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 RASA2Q15283 850 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 PDK4Q16654 411 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 ST3GAL2Q16842 350 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 KCTD1Q719H9 257 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 NOP9Q86U38 636 aaKnown RBP7.93□□□□□ -1.14
C11orf54-202ENST00000354421 CPNE8Q86YQ8 564 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 GALNT15Q8N3T1 639 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 CNBD1Q8NA66 436 aa7.93□□□□□ -1.14
C11orf54-202ENST00000354421 RBBP8NLQ8NC74 664 aaPredicted RBP7.93□□□□□ -1.14
C11orf54-202ENST00000354421 ATL2Q8NHH9 583 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms