RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 CBWD1Q9BRT8 395 aa18.8■□□□□ 0.6
EXOSC4-201ENST00000316052 PI4K2AQ9BTU6 479 aa18.8■□□□□ 0.6
EXOSC4-201ENST00000316052 GKN1Q9NS71 199 aa18.8■□□□□ 0.6
EXOSC4-201ENST00000316052 GMEB2Q9UKD1 530 aa18.8■□□□□ 0.6
EXOSC4-201ENST00000316052 USP18Q9UMW8 372 aa18.8■□□□□ 0.6
EXOSC4-201ENST00000316052 L1RE1Q9UN81 338 aa18.8■□□□□ 0.6
EXOSC4-201ENST00000316052 PCDHB5Q9Y5E4 795 aa18.8■□□□□ 0.6
EXOSC4-201ENST00000316052 LAMA1P25391 3075 aa18.8■□□□□ 0.6
EXOSC4-201ENST00000316052 FRMD3A2A2Y4 597 aa18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 PAPSS2O95340 614 aaPredicted RBP18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 IDEP14735 1019 aa18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 GARTP22102 1010 aa18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 PNPLA4P41247 253 aa18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 PLCB2Q00722 1185 aa18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 SPEM2Q0P670 501 aa18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 ITPRIPL2Q3MIP1 535 aa18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 CSGALNACT2Q8N6G5 542 aa18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 RIN3Q8TB24 985 aa18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 USP13Q92995 863 aaPredicted RBP18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 ZNF560Q96MR9 790 aa18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 USP28Q96RU2 1077 aa18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 PCIF1Q9H4Z3 704 aa18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 OLFML3Q9NRN5 406 aa18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 PCDHB13Q9Y5F0 798 aa18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 SPAG17Q6Q759 2223 aa18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 ACACBO00763 2458 aa18.79■□□□□ 0.6
EXOSC4-201ENST00000316052 OTOL1A6NHN0 477 aaPredicted RBP18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 HCRTO43612 131 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 PRPF40AO75400 957 aaKnown RBP18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 PRPF6O94906 941 aaKnown RBP18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 ACAT1P24752 427 aaKnown RBP18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 CYP2F1P24903 491 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 TXLNAP40222 546 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 TSPY1Q01534 308 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 SLC39A14Q15043 492 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 DDR2Q16832 855 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 CCDC142Q17RM4 750 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 TXNDC8Q6A555 127 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 HEATR6Q6AI08 1181 aaKnown RBP18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 LAIR1Q6GTX8 287 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 CCDC73Q6ZRK6 1079 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 PRR23BQ6ZRT6 265 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 OSTM1Q86WC4 334 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 SYCP3Q8IZU3 236 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 CACTINQ8WUQ7 758 aaKnown RBP18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 CHFRQ96EP1 664 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 PKMYT1Q99640 499 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 ACBD6Q9BR61 282 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 PDE11AQ9HCR9 933 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 HPS4Q9NQG7 708 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 PANK4Q9NVE7 773 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 THG1LQ9NWX6 298 aaKnown RBP18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 DDX43Q9NXZ2 648 aaKnown RBP18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 RBAKQ9NYW8 714 aaPredicted RBP18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 SIX4Q9UIU6 781 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 RAB23Q9ULC3 237 aa18.78■□□□□ 0.6
EXOSC4-201ENST00000316052 PRR5-ARHGAP8B1AHC4 643 aa18.77■□□□□ 0.6
EXOSC4-201ENST00000316052 EXTL3O43909 919 aa18.77■□□□□ 0.6
EXOSC4-201ENST00000316052 LDHAP00338 332 aaKnown RBP18.77■□□□□ 0.6
EXOSC4-201ENST00000316052 STAT6P42226 847 aa18.77■□□□□ 0.6
EXOSC4-201ENST00000316052 ARHGAP8P85298 464 aa18.77■□□□□ 0.6
EXOSC4-201ENST00000316052 LMNB2Q03252 620 aa18.77■□□□□ 0.6
EXOSC4-201ENST00000316052 SIM2Q14190 667 aaPredicted RBP18.77■□□□□ 0.6
EXOSC4-201ENST00000316052 NFE2Q16621 373 aaPredicted RBP18.77■□□□□ 0.6
EXOSC4-201ENST00000316052 TRIM68Q6AZZ1 485 aa18.77■□□□□ 0.6
EXOSC4-201ENST00000316052 PKN3Q6P5Z2 889 aa18.77■□□□□ 0.6
EXOSC4-201ENST00000316052 GLIS3Q8NEA6 775 aa18.77■□□□□ 0.6
EXOSC4-201ENST00000316052 EBF3Q9H4W6 596 aa18.77■□□□□ 0.6
EXOSC4-201ENST00000316052 GDAP2Q9NXN4 497 aa18.77■□□□□ 0.6
EXOSC4-201ENST00000316052 GTF3C4Q9UKN8 822 aa18.77■□□□□ 0.6
EXOSC4-201ENST00000316052 MAGED2Q9UNF1 606 aaPredicted RBP18.77■□□□□ 0.6
EXOSC4-201ENST00000316052 MTMR6Q9Y217 621 aa18.77■□□□□ 0.6
EXOSC4-201ENST00000316052 ANAPC1Q9H1A4 1944 aa18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 HUS1O60921 280 aa18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 RETP07949 1114 aa18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 AVPR1AP37288 418 aa18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 BFSP1Q12934 665 aa18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 RUNX3Q13761 415 aa18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 INTS6LQ5JSJ4 861 aaKnown RBP18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 MON1AQ86VX9 555 aa18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 LONP2Q86WA8 852 aa18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 SYNPOQ8N3V7 929 aa18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 LRRC52Q8N7C0 313 aa18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 NOC3LQ8WTT2 800 aaKnown RBP18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 LEO1Q8WVC0 666 aaPredicted RBP18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 HPS3Q969F9 1004 aa18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 TDP1Q9NUW8 608 aa18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 ZMYM5Q9UJ78 669 aa18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 ITGA11Q9UKX5 1188 aa18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 SNX9Q9Y5X1 595 aa18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 MORC2Q9Y6X9 1032 aaPredicted RBP18.76■□□□□ 0.59
EXOSC4-201ENST00000316052 CHD8Q9HCK8 2581 aa18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 TADA3O75528 432 aa18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 KRT19P08727 400 aa18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 CSH1P0DML2 217 aa18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 CSH2P0DML3 217 aa18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 ARSAP15289 507 aa18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 SDHBP21912 280 aa18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 DDX6P26196 483 aaKnown RBP eCLIP18.75■□□□□ 0.591e-6■□□□□ 10.8
EXOSC4-201ENST00000316052 RBP5P82980 135 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms