RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 UBN1Q9NPG3 1134 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 FAM114A2Q9NRY5 505 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 DDX56Q9NY93 547 aaKnown RBP20.04■□□□□ 0.8
VBP1-201ENST00000286428 SCN10AQ9Y5Y9 1956 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 RALGAPA2Q2PPJ7 1873 aa20.04■□□□□ 0.8
VBP1-201ENST00000286428 HUS1O60921 280 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 CHRNA1P02708 482 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 PAX3P23760 479 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 GPD2P43304 727 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 SSR1P43307 286 aaKnown RBP20.03■□□□□ 0.8
VBP1-201ENST00000286428 DR1Q01658 176 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 CYP1B1Q16678 543 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 PPP1R15BQ5SWA1 713 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 PHLDB2Q86SQ0 1253 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 RCOR2Q8IZ40 523 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 TOP6BLQ8N6T0 577 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 MAGOHBQ96A72 148 aaKnown RBP20.03■□□□□ 0.8
VBP1-201ENST00000286428 TNIP3Q96KP6 325 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 SEZ6LQ9BYH1 1024 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 KLK14Q9P0G3 267 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 CITO14578 2027 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 A8MXQ7 604 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 FSCN2O14926 492 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 MARCKSL1P49006 195 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 FNTAP49354 379 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 HADHQ16836 314 aaKnown RBP20.03■□□□□ 0.8
VBP1-201ENST00000286428 PTPN20Q4JDL3 420 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 HSP90B2PQ58FF3 399 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 ARHGAP17Q68EM7 881 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 IFT81Q8WYA0 676 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 RNF39Q9H2S5 420 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 PCYOX1Q9UHG3 505 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 AMACRQ9UHK6 382 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 TSPAN16Q9UKR8 245 aa20.03■□□□□ 0.8
VBP1-201ENST00000286428 SPDYE4A6NLX3 237 aa20.02■□□□□ 0.8
VBP1-201ENST00000286428 SASH3O75995 380 aa20.02■□□□□ 0.8
VBP1-201ENST00000286428 THP07101 528 aa20.02■□□□□ 0.8
VBP1-201ENST00000286428 GNL1P36915 607 aaPredicted RBP20.02■□□□□ 0.8
VBP1-201ENST00000286428 ACLYP53396 1101 aa20.02■□□□□ 0.8
VBP1-201ENST00000286428 COPS2P61201 443 aa20.02■□□□□ 0.8
VBP1-201ENST00000286428 PDCLQ13371 301 aa20.02■□□□□ 0.8
VBP1-201ENST00000286428 ZDHHC17Q8IUH5 632 aa20.02■□□□□ 0.8
VBP1-201ENST00000286428 CRYBG2Q8N1P7 616 aa20.02■□□□□ 0.8
VBP1-201ENST00000286428 STK32AQ8WU08 396 aa20.02■□□□□ 0.8
VBP1-201ENST00000286428 PGBD4Q96DM1 585 aa20.02■□□□□ 0.8
VBP1-201ENST00000286428 DDX27Q96GQ7 796 aaKnown RBP20.02■□□□□ 0.8
VBP1-201ENST00000286428 NCAPGQ9BPX3 1015 aa20.02■□□□□ 0.8
VBP1-201ENST00000286428 TRIM7Q9C029 511 aa20.02■□□□□ 0.8
VBP1-201ENST00000286428 HMX1Q9NP08 348 aaPredicted RBP20.02■□□□□ 0.8
VBP1-201ENST00000286428 HMGXB4Q9UGU5 601 aa20.02■□□□□ 0.8
VBP1-201ENST00000286428 ZNF623O75123 536 aa20.01■□□□□ 0.79
VBP1-201ENST00000286428 CTSHP09668 335 aa20.01■□□□□ 0.79
VBP1-201ENST00000286428 DRG2P55039 364 aaKnown RBP20.01■□□□□ 0.79
VBP1-201ENST00000286428 RPL7AP62424 266 aaKnown RBP20.01■□□□□ 0.79
VBP1-201ENST00000286428 SMC1AQ14683 1233 aaKnown RBP20.01■□□□□ 0.79
VBP1-201ENST00000286428 SOWAHAQ2M3V2 549 aa20.01■□□□□ 0.79
VBP1-201ENST00000286428 FAM26DQ5JW98 314 aa20.01■□□□□ 0.79
VBP1-201ENST00000286428 FAM43BQ6ZT52 329 aaPredicted RBP20.01■□□□□ 0.79
VBP1-201ENST00000286428 POLNQ7Z5Q5 900 aa20.01■□□□□ 0.79
VBP1-201ENST00000286428 CCDC50Q8IVM0 306 aa20.01■□□□□ 0.79
VBP1-201ENST00000286428 C12orf50Q8NA57 414 aaPredicted RBP20.01■□□□□ 0.79
VBP1-201ENST00000286428 ARRDC4Q8NCT1 418 aa20.01■□□□□ 0.79
VBP1-201ENST00000286428 MRPL45Q9BRJ2 306 aaKnown RBP20.01■□□□□ 0.79
VBP1-201ENST00000286428 LRRC19Q9H756 370 aa20.01■□□□□ 0.79
VBP1-201ENST00000286428 ERVK-5Q9HDB9 667 aa20.01■□□□□ 0.79
VBP1-201ENST00000286428 USTQ9Y2C2 406 aa20.01■□□□□ 0.79
VBP1-201ENST00000286428 FKTNO75072 461 aa20■□□□□ 0.79
VBP1-201ENST00000286428 KRT7P08729 469 aa20■□□□□ 0.79
VBP1-201ENST00000286428 RPL9P32969 192 aaKnown RBP20■□□□□ 0.79
VBP1-201ENST00000286428 SLC8A3P57103 927 aa20■□□□□ 0.79
VBP1-201ENST00000286428 ZFYVE27Q5T4F4 411 aa20■□□□□ 0.79
VBP1-201ENST00000286428 MRPL10Q7Z7H8 261 aaKnown RBP20■□□□□ 0.79
VBP1-201ENST00000286428 XYLT1Q86Y38 959 aa20■□□□□ 0.79
VBP1-201ENST00000286428 GRK7Q8WTQ7 553 aa20■□□□□ 0.79
VBP1-201ENST00000286428 SEC14L1Q92503 715 aa20■□□□□ 0.79
VBP1-201ENST00000286428 MCRS1Q96EZ8 462 aa20■□□□□ 0.79
VBP1-201ENST00000286428 PKNOX2Q96KN3 472 aa20■□□□□ 0.79
VBP1-201ENST00000286428 PPP1R10Q96QC0 940 aaKnown RBP20■□□□□ 0.79
VBP1-201ENST00000286428 CPXM1Q96SM3 734 aa20■□□□□ 0.79
VBP1-201ENST00000286428 FAM129AQ9BZQ8 928 aa20■□□□□ 0.79
VBP1-201ENST00000286428 MED4Q9NPJ6 270 aa20■□□□□ 0.79
VBP1-201ENST00000286428 CYLDQ9NQC7 956 aa20■□□□□ 0.79
VBP1-201ENST00000286428 RNF8O76064 485 aa20■□□□□ 0.79
VBP1-201ENST00000286428 PSMA2P25787 234 aa20■□□□□ 0.79
VBP1-201ENST00000286428 PLA2G4AP47712 749 aa20■□□□□ 0.79
VBP1-201ENST00000286428 LILRA4P59901 499 aa20■□□□□ 0.79
VBP1-201ENST00000286428 HLTFQ14527 1009 aaKnown RBP eCLIP20■□□□□ 0.79
VBP1-201ENST00000286428 CYP4A22Q5TCH4 519 aa20■□□□□ 0.79
VBP1-201ENST00000286428 LLGL2Q6P1M3 1020 aa20■□□□□ 0.79
VBP1-201ENST00000286428 CCDC137Q6PK04 289 aaKnown RBP20■□□□□ 0.79
VBP1-201ENST00000286428 SYDE1Q6ZW31 735 aaPredicted RBP20■□□□□ 0.79
VBP1-201ENST00000286428 SND1Q7KZF4 910 aaKnown RBP eCLIP20■□□□□ 0.79
VBP1-201ENST00000286428 TSPYL2Q9H2G4 693 aaPredicted RBP20■□□□□ 0.79
VBP1-201ENST00000286428 ST7Q9NRC1 585 aa20■□□□□ 0.79
VBP1-201ENST00000286428 ASNSD1Q9NWL6 643 aa20■□□□□ 0.79
VBP1-201ENST00000286428 PADI3Q9ULW8 664 aa20■□□□□ 0.79
VBP1-201ENST00000286428 GOLGA8SH3BPF8 625 aa19.99■□□□□ 0.79
VBP1-201ENST00000286428 CARSP49589 748 aaKnown RBP19.99■□□□□ 0.79
VBP1-201ENST00000286428 MRPS25P82663 173 aaKnown RBP19.99■□□□□ 0.79
VBP1-201ENST00000286428 ORC1Q13415 861 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms