RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 RPS25BP0C0T4 108 aaKnown RBP-0.3□□□□□ -2.46
snR78snR78 AHC2P25649 128 aa-0.3□□□□□ -2.46
snR78snR78 PAC10P48363 199 aa-0.3□□□□□ -2.46
snR78snR78 GEP7P53171 287 aa-0.3□□□□□ -2.46
snR78snR78 RPS25AQ3E792 108 aaPredicted RBP-0.3□□□□□ -2.46
snR78snR78 YNL200CP40165 246 aaKnown RBP-0.31□□□□□ -2.46
snR78snR78 RFC2P40348 353 aa-0.31□□□□□ -2.46
snR78snR78 FMP32P43557 207 aa-0.31□□□□□ -2.46
snR78snR78 CCC1P47818 322 aa-0.31□□□□□ -2.46
snR78snR78 SHH4Q06236 168 aa-0.31□□□□□ -2.46
snR78snR78 YLR157W-EP0CF00 54 aa-0.32□□□□□ -2.46
snR78snR78 YEL073CP39974 107 aa-0.32□□□□□ -2.46
snR78snR78 GPI17Q04080 534 aa-0.32□□□□□ -2.46
snR78snR78 YPR127WQ06494 345 aa-0.32□□□□□ -2.46
snR78snR78 RAD6P06104 172 aa-0.33□□□□□ -2.46
snR78snR78 HAP2P06774 265 aa-0.33□□□□□ -2.46
snR78snR78 YKL102CP34249 101 aa-0.33□□□□□ -2.46
snR78snR78 TIM13P53299 105 aa-0.33□□□□□ -2.46
snR78snR78 RPB4P20433 221 aaPredicted RBP-0.34□□□□□ -2.46
snR78snR78 CAF4P36130 643 aa-0.35□□□□□ -2.47
snR78snR78 RNH1Q04740 348 aa-0.35□□□□□ -2.47
snR78snR78 RAD9P14737 1309 aa-0.37□□□□□ -2.47
snR78snR78 SPS2P08459 502 aa-0.37□□□□□ -2.47
snR78snR78 NQM1P53228 333 aaPredicted RBP-0.38□□□□□ -2.47
snR78snR78 GRX8Q05926 109 aa-0.38□□□□□ -2.47
snR78snR78 BRX1Q08235 291 aaKnown RBP-0.38□□□□□ -2.47
snR78snR78 UBC6P33296 250 aaPredicted RBP-0.4□□□□□ -2.47
snR78snR78 TTI2P47168 421 aa-0.4□□□□□ -2.47
snR78snR78 TRM3Q07527 1436 aa-0.4□□□□□ -2.47
snR78snR78 SPT14P32363 452 aa-0.41□□□□□ -2.48
snR78snR78 HOP2P53187 214 aa-0.41□□□□□ -2.48
snR78snR78 YEL014CP39999 101 aa-0.42□□□□□ -2.48
snR78snR78 GLC8P41818 229 aa-0.42□□□□□ -2.48
snR78snR78 SEN15Q04675 128 aa-0.42□□□□□ -2.48
snR78snR78 CSH1P38287 376 aa-0.43□□□□□ -2.48
snR78snR78 YEL028WP39989 153 aa-0.43□□□□□ -2.48
snR78snR78 GLR1P41921 483 aaKnown RBP-0.44□□□□□ -2.48
snR78snR78 SOL1P50278 321 aa-0.44□□□□□ -2.48
snR78snR78 SYM1Q06563 197 aa-0.45□□□□□ -2.48
snR78snR78 UIP4Q08926 304 aa-0.45□□□□□ -2.48
snR78snR78 CMC4Q3E7A9 73 aa-0.45□□□□□ -2.48
snR78snR78 YKT6P36015 200 aaKnown RBP-0.46□□□□□ -2.48
snR78snR78 LIP1Q03579 150 aa-0.46□□□□□ -2.48
snR78snR78 YDL241WQ07738 123 aa-0.46□□□□□ -2.48
snR78snR78 HPT1Q04178 221 aaKnown RBP-0.47□□□□□ -2.48
snR78snR78 INO4P13902 151 aa-0.48□□□□□ -2.49
snR78snR78 ATG8P38182 117 aaRIP-Chip data-0.48□□□□□ -2.49not detected
snR78snR78 NVJ1P38881 321 aa-0.48□□□□□ -2.49
snR78snR78 HYP2P23301 157 aaKnown RBP-0.49□□□□□ -2.49
snR78snR78 HSP150P32478 413 aa-0.49□□□□□ -2.49
snR78snR78 YKR041WP36134 250 aa-0.49□□□□□ -2.49
snR78snR78 SHG1P38337 142 aa-0.49□□□□□ -2.49
snR78snR78 YHR140WP38842 239 aa-0.49□□□□□ -2.49
snR78snR78 NUF2P33895 451 aa-0.5□□□□□ -2.49
snR78snR78 ECM31P38122 312 aa-0.5□□□□□ -2.49
snR78snR78 CGR1P53188 120 aa-0.5□□□□□ -2.49
snR78snR78 HTD2P38790 280 aaKnown RBP-0.51□□□□□ -2.49
snR78snR78 XPT1P47165 209 aa-0.51□□□□□ -2.49
snR78snR78 ATG10Q07879 167 aa-0.52□□□□□ -2.49
snR78snR78 CDC39P25655 2108 aaKnown RBP-0.52□□□□□ -2.49
snR78snR78 SNO1Q03144 224 aa-0.53□□□□□ -2.49
snR78snR78 YOR034C-AQ3E735 80 aa-0.54□□□□□ -2.5
snR78snR78 JIP3O13555 125 aa-0.55□□□□□ -2.5
snR78snR78 TIM11P81449 96 aaPredicted RBP-0.56□□□□□ -2.5
snR78snR78 RIB3Q99258 208 aa-0.56□□□□□ -2.5
snR78snR78 HSL1P34244 1518 aa-0.58□□□□□ -2.5
snR78snR78 YPT31P38555 223 aaKnown RBP-0.58□□□□□ -2.5
snR78snR78 YJL009WP47078 108 aa-0.59□□□□□ -2.5
snR78snR78 JAC1P53193 184 aa-0.59□□□□□ -2.5
snR78snR78 YPR114WQ06107 315 aa-0.59□□□□□ -2.5
snR78snR78 ADE6P38972 1358 aaKnown RBP-0.59□□□□□ -2.5
snR78snR78 IPT1P38954 527 aa-0.61□□□□□ -2.51
snR78snR78 YET3Q07451 203 aa-0.61□□□□□ -2.51
snR78snR78 PEX11Q12462 236 aa-0.61□□□□□ -2.51
snR78snR78 RPL33AP05744 107 aaKnown RBP-0.62□□□□□ -2.51
snR78snR78 RPS29BP41058 56 aaKnown RBP-0.62□□□□□ -2.51
snR78snR78 LAA1P39526 2014 aa-0.62□□□□□ -2.51
snR78snR78 SRP102P36057 244 aaPredicted RBP-0.63□□□□□ -2.51
snR78snR78 BLM10P43583 2143 aa-0.63□□□□□ -2.51
snR78snR78 SLM6P38343 150 aa-0.64□□□□□ -2.51
snR78snR78 IRC21Q04772 201 aa-0.64□□□□□ -2.51
snR78snR78 NMA1Q06178 401 aaKnown RBP-0.64□□□□□ -2.51
snR78snR78 APA2P22108 325 aa-0.65□□□□□ -2.51
snR78snR78 MVB12P42939 101 aa-0.65□□□□□ -2.51
snR78snR78 YNR064CP53750 290 aa-0.65□□□□□ -2.51
snR78snR78 URA2P07259 2214 aaKnown RBP-0.66□□□□□ -2.51
snR78snR78 THI74Q04083 370 aa-0.66□□□□□ -2.52
snR78snR78 FMN1Q03778 218 aa-0.67□□□□□ -2.52
snR78snR78 YMR321CQ04898 105 aa-0.67□□□□□ -2.52
snR78snR78 PLP1Q04004 230 aa-0.68□□□□□ -2.52
snR78snR78 YGL041W-AP0C5N3 154 aa-0.7□□□□□ -2.52
snR78snR78 CWC21Q03375 135 aaKnown RBP-0.7□□□□□ -2.52
snR78snR78 YDR102CQ03864 110 aa-0.7□□□□□ -2.52
snR78snR78 COA6Q3E846 104 aa-0.7□□□□□ -2.52
snR78snR78 SPA2P23201 1466 aaKnown RBP-0.71□□□□□ -2.52
snR78snR78 RCF2P53721 224 aa-0.73□□□□□ -2.53
snR78snR78 HUG1Q6Q5K6 68 aa-0.73□□□□□ -2.53
snR78snR78 TAO3P40468 2376 aa-0.73□□□□□ -2.53
snR78snR78 GPI11Q06636 219 aa-0.74□□□□□ -2.53
snR78snR78 TRR1P29509 319 aaKnown RBP-0.75□□□□□ -2.53
Retrieved 100 of 5,963 RNA–protein pairs in 78 ms