RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W RPL2BP0CX46 254 aaKnown RBP1.62□□□□□ -2.15
VPS16YPL045W PEX34P25584 144 aa1.62□□□□□ -2.15
VPS16YPL045W SCM4P32564 187 aa1.62□□□□□ -2.15
VPS16YPL045W YHL026CP38740 315 aa1.62□□□□□ -2.15
VPS16YPL045W VTC1P40046 129 aaRIP-Chip data1.62□□□□□ -2.15not detected
VPS16YPL045W MNN5P46982 586 aa1.62□□□□□ -2.15
VPS16YPL045W ORM1P53224 222 aa1.62□□□□□ -2.15
VPS16YPL045W YGR042WP53227 271 aa1.62□□□□□ -2.15
VPS16YPL045W ODC2Q99297 307 aa1.62□□□□□ -2.15
VPS16YPL045W PBI2P0CT04 75 aaKnown RBP1.62□□□□□ -2.15
VPS16YPL045W IDP1P21954 428 aaKnown RBP1.62□□□□□ -2.15
VPS16YPL045W AGA2P32781 87 aa1.62□□□□□ -2.15
VPS16YPL045W YET1P35723 206 aa1.62□□□□□ -2.15
VPS16YPL045W PAN3P36102 679 aaPredicted RBP1.62□□□□□ -2.15
VPS16YPL045W IPI1P38803 334 aaPredicted RBP1.62□□□□□ -2.15
VPS16YPL045W CYC2P38909 366 aa1.62□□□□□ -2.15
VPS16YPL045W FCY21P40039 528 aa1.62□□□□□ -2.15
VPS16YPL045W YER134CP40081 178 aa1.62□□□□□ -2.15
VPS16YPL045W APQ12P40532 138 aa1.62□□□□□ -2.15
VPS16YPL045W YGL204CP53089 101 aa1.62□□□□□ -2.15
VPS16YPL045W YAR023CD6VPM8 179 aa1.61□□□□□ -2.15
VPS16YPL045W HAP2P06774 265 aa1.61□□□□□ -2.15
VPS16YPL045W PHO13P19881 312 aa1.61□□□□□ -2.15
VPS16YPL045W CPR5P35176 225 aa1.61□□□□□ -2.15
VPS16YPL045W LSM3P57743 89 aaKnown RBP1.61□□□□□ -2.15
VPS16YPL045W YDR114CQ04597 100 aa1.61□□□□□ -2.15
VPS16YPL045W YLR412C-AQ3E742 68 aa1.61□□□□□ -2.15
VPS16YPL045W KRE1P17260 313 aa1.61□□□□□ -2.15
VPS16YPL045W RSA4P25382 515 aaKnown RBP1.61□□□□□ -2.15
VPS16YPL045W UMP1P38293 148 aa1.61□□□□□ -2.15
VPS16YPL045W YHR180WP38868 163 aa1.61□□□□□ -2.15
VPS16YPL045W YNL200CP40165 246 aaKnown RBP1.61□□□□□ -2.15
VPS16YPL045W PGD1P40356 397 aa1.61□□□□□ -2.15
VPS16YPL045W XPT1P47165 209 aa1.61□□□□□ -2.15
VPS16YPL045W YMR099CQ03161 297 aaKnown RBP1.61□□□□□ -2.15
VPS16YPL045W CPA1P07258 411 aaKnown RBP1.6□□□□□ -2.15
VPS16YPL045W SFK1P35735 353 aa1.6□□□□□ -2.15
VPS16YPL045W YGR201CP42936 225 aa1.6□□□□□ -2.15
VPS16YPL045W NEJ1Q06148 342 aa1.6□□□□□ -2.15
VPS16YPL045W YPR117WQ06116 2489 aa1.6□□□□□ -2.15
VPS16YPL045W POR1P04840 283 aaKnown RBP1.59□□□□□ -2.15
VPS16YPL045W RPL30P14120 105 aaKnown RBP1.59□□□□□ -2.15
VPS16YPL045W SNC2P33328 115 aa1.59□□□□□ -2.15
VPS16YPL045W YBR285WP38354 144 aa1.59□□□□□ -2.15
VPS16YPL045W HHT1P61830 136 aa1.59□□□□□ -2.15
VPS16YPL045W MZM1Q03429 123 aaPredicted RBP1.59□□□□□ -2.15
VPS16YPL045W VPS71Q03433 280 aa1.59□□□□□ -2.15
VPS16YPL045W YPR195CQ06594 109 aa1.59□□□□□ -2.15
VPS16YPL045W ATO3Q12359 275 aa1.59□□□□□ -2.15
VPS16YPL045W RPL26AP05743 127 aaKnown RBP1.59□□□□□ -2.16
VPS16YPL045W STP22P25604 385 aa1.59□□□□□ -2.16
VPS16YPL045W FYV4P38783 130 aaPredicted RBP1.59□□□□□ -2.16
VPS16YPL045W DLS1P40366 167 aa1.59□□□□□ -2.16
VPS16YPL045W AGE2P40529 298 aa1.59□□□□□ -2.16
VPS16YPL045W YJR015WP47090 510 aa1.59□□□□□ -2.16
VPS16YPL045W YJR146WP47174 117 aa1.59□□□□□ -2.16
VPS16YPL045W DOC1P53068 250 aa1.59□□□□□ -2.16
VPS16YPL045W RPL26BP53221 127 aaKnown RBP1.59□□□□□ -2.16
VPS16YPL045W MPC3P53311 146 aa1.59□□□□□ -2.16
VPS16YPL045W RAV2Q03956 351 aa1.59□□□□□ -2.16
VPS16YPL045W YMR320WQ04897 101 aa1.59□□□□□ -2.16
VPS16YPL045W FYV12Q08559 129 aa1.59□□□□□ -2.16
VPS16YPL045W YOR214CQ12282 236 aa1.59□□□□□ -2.16
VPS16YPL045W FAB1P34756 2278 aa1.59□□□□□ -2.16
VPS16YPL045W TIR1P10863 254 aa1.58□□□□□ -2.16
VPS16YPL045W FMT1P32785 401 aa1.58□□□□□ -2.16
VPS16YPL045W ERJ5P43613 295 aaPredicted RBP1.58□□□□□ -2.16
VPS16YPL045W RBL2P48606 106 aaKnown RBP1.58□□□□□ -2.16
VPS16YPL045W YNR077CP53758 84 aa1.58□□□□□ -2.16
VPS16YPL045W RIB3Q99258 208 aa1.58□□□□□ -2.16
VPS16YPL045W VPS13Q07878 3144 aa1.58□□□□□ -2.16
VPS16YPL045W STT4P37297 1900 aa1.58□□□□□ -2.16
VPS16YPL045W NSP1P14907 823 aaKnown RBP1.58□□□□□ -2.16
VPS16YPL045W MIG1P27705 504 aa1.58□□□□□ -2.16
VPS16YPL045W YFR054CP43622 192 aa1.58□□□□□ -2.16
VPS16YPL045W YGR219WP53307 113 aa1.58□□□□□ -2.16
VPS16YPL045W FSF1Q12029 327 aaKnown RBP1.58□□□□□ -2.16
VPS16YPL045W YDR034W-BQ6Q5X2 51 aa1.58□□□□□ -2.16
VPS16YPL045W MOB1P40484 314 aa1.57□□□□□ -2.16
VPS16YPL045W GLR1P41921 483 aaKnown RBP1.57□□□□□ -2.16
VPS16YPL045W FIP1P45976 327 aa1.57□□□□□ -2.16
VPS16YPL045W TIM13P53299 105 aa1.57□□□□□ -2.16
VPS16YPL045W YNR062CP53748 327 aa1.57□□□□□ -2.16
VPS16YPL045W SLM2P53955 656 aa1.57□□□□□ -2.16
VPS16YPL045W CSN9Q03981 162 aa1.57□□□□□ -2.16
VPS16YPL045W RDS3Q06835 107 aaPredicted RBP1.57□□□□□ -2.16
VPS16YPL045W ATP5P09457 212 aa1.57□□□□□ -2.16
VPS16YPL045W YPL073CP40323 161 aa1.57□□□□□ -2.16
VPS16YPL045W CIS3P47001 227 aa1.57□□□□□ -2.16
VPS16YPL045W SBH1P52870 82 aa1.57□□□□□ -2.16
VPS16YPL045W GIS2P53849 153 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
VPS16YPL045W DIG2Q03373 323 aaKnown RBP1.57□□□□□ -2.16
VPS16YPL045W YMR295CQ03559 197 aa1.57□□□□□ -2.16
VPS16YPL045W GAL83Q04739 417 aa1.57□□□□□ -2.16
VPS16YPL045W SML1Q04964 104 aa1.57□□□□□ -2.16
VPS16YPL045W ATP20Q12233 115 aa1.57□□□□□ -2.16
VPS16YPL045W YLR361C-AQ3E795 98 aa1.57□□□□□ -2.16
VPS16YPL045W SHE2P36068 246 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
VPS16YPL045W SPC25P40014 221 aa1.56□□□□□ -2.16
VPS16YPL045W NSA2P40078 261 aaKnown RBP1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms