RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C YLR422WQ06409 1932 aa1.36□□□□□ -2.19
RPN8YOR261C DNF2Q12675 1612 aa1.36□□□□□ -2.19
RPN8YOR261C PDR5P33302 1511 aaKnown RBP1.35□□□□□ -2.19
RPN8YOR261C SNF4P12904 322 aa1.35□□□□□ -2.19
RPN8YOR261C IDP1P21954 428 aaKnown RBP1.35□□□□□ -2.19
RPN8YOR261C ARO7P32178 256 aa1.35□□□□□ -2.19
RPN8YOR261C SFK1P35735 353 aa1.35□□□□□ -2.19
RPN8YOR261C YAP3P38749 330 aa1.35□□□□□ -2.19
RPN8YOR261C SPC25P40014 221 aa1.35□□□□□ -2.19
RPN8YOR261C CUP9P41817 306 aa1.35□□□□□ -2.19
RPN8YOR261C UPS3Q04006 179 aa1.35□□□□□ -2.19
RPN8YOR261C GCN2P15442 1659 aa1.35□□□□□ -2.19
RPN8YOR261C IML1P47170 1584 aa1.34□□□□□ -2.19
RPN8YOR261C YOR093CQ12275 1648 aa1.34□□□□□ -2.19
RPN8YOR261C RME1P32338 300 aaKnown RBP1.34□□□□□ -2.19
RPN8YOR261C SEC72P39742 193 aaKnown RBP1.34□□□□□ -2.19
RPN8YOR261C PDS1P40316 373 aaPredicted RBP1.34□□□□□ -2.19
RPN8YOR261C YFL019CP43576 117 aa1.34□□□□□ -2.19
RPN8YOR261C ALB1P47019 175 aaPredicted RBP1.34□□□□□ -2.19
RPN8YOR261C VPS71Q03433 280 aa1.34□□□□□ -2.19
RPN8YOR261C NOC4Q06512 552 aaPredicted RBP1.34□□□□□ -2.19
RPN8YOR261C NUP188P52593 1655 aaKnown RBP1.33□□□□□ -2.2
RPN8YOR261C DNF3Q12674 1656 aa1.33□□□□□ -2.2
RPN8YOR261C GSP2P32836 220 aaKnown RBP1.33□□□□□ -2.2
RPN8YOR261C CAF4P36130 643 aa1.33□□□□□ -2.2
RPN8YOR261C EGD2P38879 174 aaKnown RBP1.33□□□□□ -2.2
RPN8YOR261C RTC4P53850 401 aa1.33□□□□□ -2.2
RPN8YOR261C SNO1Q03144 224 aa1.33□□□□□ -2.2
RPN8YOR261C LCL2Q08045 131 aa1.33□□□□□ -2.2
RPN8YOR261C VMR1P38735 1592 aa1.33□□□□□ -2.2
RPN8YOR261C RPL35AP0CX84 120 aaKnown RBP1.32□□□□□ -2.2
RPN8YOR261C RPL35BP0CX85 120 aaKnown RBP1.32□□□□□ -2.2
RPN8YOR261C GCY1P14065 312 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
RPN8YOR261C POG1P40473 351 aa1.32□□□□□ -2.2
RPN8YOR261C GPI14P47088 403 aaKnown RBP1.32□□□□□ -2.2
RPN8YOR261C YIP3P53633 176 aa1.32□□□□□ -2.2
RPN8YOR261C GRX8Q05926 109 aa1.32□□□□□ -2.2
RPN8YOR261C YOL024WQ08172 172 aa1.32□□□□□ -2.2
RPN8YOR261C PDR11P40550 1411 aa1.32□□□□□ -2.2
RPN8YOR261C TRX3P25372 127 aa1.31□□□□□ -2.2
RPN8YOR261C RAD51P25454 400 aa1.31□□□□□ -2.2
RPN8YOR261C TAH1P25638 111 aaPredicted RBP1.31□□□□□ -2.2
RPN8YOR261C SHG1P38337 142 aa1.31□□□□□ -2.2
RPN8YOR261C NRK1P53915 240 aa1.31□□□□□ -2.2
RPN8YOR261C YDR391CQ04170 232 aa1.31□□□□□ -2.2
RPN8YOR261C GIM5Q04493 163 aa1.31□□□□□ -2.2
RPN8YOR261C YET3Q07451 203 aa1.31□□□□□ -2.2
RPN8YOR261C BRX1Q08235 291 aaKnown RBP1.31□□□□□ -2.2
RPN8YOR261C SEC7P11075 2009 aaKnown RBP1.31□□□□□ -2.2
RPN8YOR261C TY1B-NL2Q99337 1749 aaKnown RBP1.31□□□□□ -2.2
RPN8YOR261C BCK1Q01389 1478 aa1.31□□□□□ -2.2
RPN8YOR261C SEN2P16658 377 aa1.3□□□□□ -2.2
RPN8YOR261C YKR041WP36134 250 aa1.3□□□□□ -2.2
RPN8YOR261C TMA22P47089 198 aaPredicted RBP1.3□□□□□ -2.2
RPN8YOR261C MET31Q03081 177 aa1.3□□□□□ -2.2
RPN8YOR261C DIG2Q03373 323 aaKnown RBP1.3□□□□□ -2.2
RPN8YOR261C AIM36Q03798 255 aa1.3□□□□□ -2.2
RPN8YOR261C YDL085C-AQ3E7B7 68 aaKnown RBP1.3□□□□□ -2.2
RPN8YOR261C TY3B-IQ7LHG5 1498 aaKnown RBP1.3□□□□□ -2.2
RPN8YOR261C RIF1P29539 1916 aa1.29□□□□□ -2.2
RPN8YOR261C YCR023CP25351 611 aa1.29□□□□□ -2.2
RPN8YOR261C TRR1P29509 319 aaKnown RBP1.29□□□□□ -2.2
RPN8YOR261C MRPL15P36523 253 aa1.29□□□□□ -2.2
RPN8YOR261C SRP14P38985 146 aa1.29□□□□□ -2.2
RPN8YOR261C PGA1P53896 198 aa1.29□□□□□ -2.2
RPN8YOR261C SMD2Q06217 110 aaKnown RBP1.29□□□□□ -2.2
RPN8YOR261C FYV12Q08559 129 aa1.29□□□□□ -2.2
RPN8YOR261C YPR203WQ08994 102 aa1.29□□□□□ -2.2
RPN8YOR261C PST2Q12335 198 aaKnown RBP1.29□□□□□ -2.2
RPN8YOR261C CMC2Q3E7A4 109 aa1.29□□□□□ -2.2
RPN8YOR261C KRE5P22023 1365 aa1.29□□□□□ -2.2
RPN8YOR261C YLR419WQ06698 1435 aaKnown RBP1.29□□□□□ -2.2
RPN8YOR261C NUP192P47054 1683 aa1.29□□□□□ -2.2
RPN8YOR261C QCR6P00127 147 aa1.28□□□□□ -2.2
RPN8YOR261C RPS24AP0CX31 135 aaKnown RBP1.28□□□□□ -2.2
RPN8YOR261C RPS24BP0CX32 135 aaKnown RBP1.28□□□□□ -2.2
RPN8YOR261C YBR242WP38331 238 aa1.28□□□□□ -2.2
RPN8YOR261C ATP20Q12233 115 aa1.28□□□□□ -2.2
RPN8YOR261C YPR014CQ6B0W2 109 aa1.28□□□□□ -2.2
RPN8YOR261C UBC8P28263 218 aa1.27□□□□□ -2.21
RPN8YOR261C CLG1P35190 452 aa1.27□□□□□ -2.21
RPN8YOR261C JAC1P53193 184 aa1.27□□□□□ -2.21
RPN8YOR261C YNL140CP53910 189 aa1.27□□□□□ -2.21
RPN8YOR261C RRP17Q04031 235 aaPredicted RBP1.27□□□□□ -2.21
RPN8YOR261C DAS2Q12084 232 aa1.27□□□□□ -2.21
RPN8YOR261C YOR342CQ12182 319 aa1.27□□□□□ -2.21
RPN8YOR261C YLR412C-AQ3E742 68 aa1.27□□□□□ -2.21
RPN8YOR261C TAR1Q8TGM6 124 aa1.27□□□□□ -2.21
RPN8YOR261C ADE6P38972 1358 aaKnown RBP1.26□□□□□ -2.21
RPN8YOR261C ARC19P33204 171 aaKnown RBP1.26□□□□□ -2.21
RPN8YOR261C VPS51P36116 164 aa1.26□□□□□ -2.21
RPN8YOR261C MAK5P38112 773 aaPredicted RBP1.26□□□□□ -2.21
RPN8YOR261C NSG1P38837 291 aa1.26□□□□□ -2.21
RPN8YOR261C NVJ1P38881 321 aa1.26□□□□□ -2.21
RPN8YOR261C YER121WP40076 114 aa1.26□□□□□ -2.21
RPN8YOR261C NSA2P40078 261 aaKnown RBP1.26□□□□□ -2.21
RPN8YOR261C MPM1P40364 252 aa1.26□□□□□ -2.21
RPN8YOR261C YGL235WP53071 178 aa1.26□□□□□ -2.21
RPN8YOR261C AIM34Q03673 198 aa1.26□□□□□ -2.21
RPN8YOR261C SHH4Q06236 168 aa1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms