RNA–Protein interactions for RNA: YNL086W

SNN1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene SNN1, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNN1YNL086W TIR4Q12218 487 aaPredicted RBP4.36□□□□□ -1.71
SNN1YNL086W SHE2P36068 246 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
SNN1YNL086W PEX22P39718 180 aa4.35□□□□□ -1.71
SNN1YNL086W YIA6P40556 373 aa4.35□□□□□ -1.71
SNN1YNL086W ERV29P53337 310 aa4.35□□□□□ -1.71
SNN1YNL086W YPR013CQ12145 317 aa4.35□□□□□ -1.71
SNN1YNL086W POM33Q12164 279 aa4.35□□□□□ -1.71
SNN1YNL086W AGC1Q12482 902 aa4.35□□□□□ -1.71
SNN1YNL086W ODC2Q99297 307 aa4.35□□□□□ -1.71
SNN1YNL086W PET54P10834 293 aa4.34□□□□□ -1.71
SNN1YNL086W FUS3P16892 353 aaKnown RBP4.34□□□□□ -1.71
SNN1YNL086W PRE7P23724 241 aaKnown RBP4.34□□□□□ -1.71
SNN1YNL086W AHC2P25649 128 aa4.34□□□□□ -1.71
SNN1YNL086W NVJ1P38881 321 aa4.34□□□□□ -1.71
SNN1YNL086W LST8P41318 303 aa4.34□□□□□ -1.71
SNN1YNL086W NOP1P15646 327 aaKnown RBP4.33□□□□□ -1.72
SNN1YNL086W YMR31P19955 123 aa4.33□□□□□ -1.72
SNN1YNL086W MIG3P39943 394 aa4.33□□□□□ -1.72
SNN1YNL086W YJL218WP40892 196 aaKnown RBP4.33□□□□□ -1.72
SNN1YNL086W DIE2P50076 525 aa4.33□□□□□ -1.72
SNN1YNL086W HAL1Q01766 294 aa4.33□□□□□ -1.72
SNN1YNL086W CDC50P25656 391 aa4.32□□□□□ -1.72
SNN1YNL086W BNA6P43619 295 aa4.32□□□□□ -1.72
SNN1YNL086W YAR1P46683 200 aa4.32□□□□□ -1.72
SNN1YNL086W TDA4P47153 279 aa4.32□□□□□ -1.72
SNN1YNL086W FYV6P53913 173 aa4.32□□□□□ -1.72
SNN1YNL086W ATG39Q06159 398 aa4.32□□□□□ -1.72
SNN1YNL086W MEU1Q07938 337 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
SNN1YNL086W RBD2Q12270 262 aa4.32□□□□□ -1.72
SNN1YNL086W YEL009C-AA0A023PZF2 135 aa4.31□□□□□ -1.72
SNN1YNL086W ADH2P00331 348 aaKnown RBP4.31□□□□□ -1.72
SNN1YNL086W ZRC1P20107 442 aa4.31□□□□□ -1.72
SNN1YNL086W YHR138CP38841 114 aaPredicted RBP4.31□□□□□ -1.72
SNN1YNL086W EGD2P38879 174 aaKnown RBP4.31□□□□□ -1.72
SNN1YNL086W SNU13P39990 126 aaKnown RBP4.31□□□□□ -1.72
SNN1YNL086W MIC26P50087 233 aa4.31□□□□□ -1.72
SNN1YNL086W SWT21P53873 357 aaPredicted RBP4.31□□□□□ -1.72
SNN1YNL086W YPR108W-AQ3E7B3 70 aa4.31□□□□□ -1.72
SNN1YNL086W YLR365WQ7LIF2 110 aa4.31□□□□□ -1.72
SNN1YNL086W URA6P15700 204 aa4.3□□□□□ -1.72
SNN1YNL086W SEN2P16658 377 aa4.3□□□□□ -1.72
SNN1YNL086W AST1P35183 429 aa4.3□□□□□ -1.72
SNN1YNL086W YPC1P38298 316 aa4.3□□□□□ -1.72
SNN1YNL086W MED8P38304 223 aa4.3□□□□□ -1.72
SNN1YNL086W YAR068WP39564 161 aa4.3□□□□□ -1.72
SNN1YNL086W SYS1P41544 203 aa4.3□□□□□ -1.72
SNN1YNL086W YGR042WP53227 271 aa4.3□□□□□ -1.72
SNN1YNL086W BOL1Q3E793 110 aa4.3□□□□□ -1.72
SNN1YNL086W HUG1Q6Q5K6 68 aa4.3□□□□□ -1.72
SNN1YNL086W IFM1P25038 676 aa4.29□□□□□ -1.72
SNN1YNL086W FMP23P38231 175 aa4.29□□□□□ -1.72
SNN1YNL086W TLG1Q03322 224 aa4.29□□□□□ -1.72
SNN1YNL086W GRX3Q03835 250 aa4.29□□□□□ -1.72
SNN1YNL086W SOD1P00445 154 aaKnown RBP4.28□□□□□ -1.72
SNN1YNL086W MRPL20P22354 195 aaPredicted RBP4.28□□□□□ -1.72
SNN1YNL086W BFR1P38934 470 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
SNN1YNL086W SMB1P40018 196 aaKnown RBP4.28□□□□□ -1.72
SNN1YNL086W TAD2P47058 250 aa4.28□□□□□ -1.72
SNN1YNL086W VHT1P53241 593 aa4.28□□□□□ -1.72
SNN1YNL086W MAK3Q03503 176 aa4.28□□□□□ -1.72
SNN1YNL086W VBA1Q04301 562 aa4.28□□□□□ -1.72
SNN1YNL086W PET8P38921 284 aa4.27□□□□□ -1.73
SNN1YNL086W OTU1P43558 301 aa4.27□□□□□ -1.73
SNN1YNL086W IGD1P43598 195 aa4.27□□□□□ -1.73
SNN1YNL086W IRC18P47056 224 aa4.27□□□□□ -1.73
SNN1YNL086W YPR195CQ06594 109 aa4.27□□□□□ -1.73
SNN1YNL086W HRD1Q08109 551 aa4.27□□□□□ -1.73
SNN1YNL086W TRM10Q12400 293 aa4.27□□□□□ -1.73
SNN1YNL086W YOR011W-AQ3E807 68 aa4.27□□□□□ -1.73
SNN1YNL086W HIS3P06633 220 aa4.26□□□□□ -1.73
SNN1YNL086W SPT4P32914 102 aaPredicted RBP4.26□□□□□ -1.73
SNN1YNL086W UPS2P35200 230 aa4.26□□□□□ -1.73
SNN1YNL086W HIT1P46973 164 aa4.26□□□□□ -1.73
SNN1YNL086W ARO8P53090 500 aaKnown RBP4.26□□□□□ -1.73
SNN1YNL086W YML018CQ03730 393 aa4.26□□□□□ -1.73
SNN1YNL086W YDR115WQ04598 105 aa4.26□□□□□ -1.73
SNN1YNL086W YNG1Q08465 219 aa4.26□□□□□ -1.73
SNN1YNL086W QCR7P00128 127 aa4.25□□□□□ -1.73
SNN1YNL086W RNP1P32385 249 aa4.25□□□□□ -1.73
SNN1YNL086W DOG2P38773 246 aa4.25□□□□□ -1.73
SNN1YNL086W DOG1P38774 246 aa4.25□□□□□ -1.73
SNN1YNL086W POR2P40478 281 aa4.25□□□□□ -1.73
SNN1YNL086W SSU72P53538 206 aaPredicted RBP4.25□□□□□ -1.73
SNN1YNL086W MRPL50P53724 139 aa4.25□□□□□ -1.73
SNN1YNL086W SGF11Q03067 99 aa4.25□□□□□ -1.73
SNN1YNL086W ADD37Q03233 198 aa4.25□□□□□ -1.73
SNN1YNL086W SDO1Q07953 250 aaKnown RBP4.25□□□□□ -1.73
SNN1YNL086W YCR001WP25347 104 aa4.24□□□□□ -1.73
SNN1YNL086W YCR016WP25617 290 aaKnown RBP4.24□□□□□ -1.73
SNN1YNL086W TRR1P29509 319 aaKnown RBP4.24□□□□□ -1.73
SNN1YNL086W RRT1P38192 103 aa4.24□□□□□ -1.73
SNN1YNL086W MSS2P40990 351 aa4.24□□□□□ -1.73
SNN1YNL086W YAE1P47118 141 aaPredicted RBP4.24□□□□□ -1.73
SNN1YNL086W VMA10P48836 114 aaKnown RBP4.24□□□□□ -1.73
SNN1YNL086W SDS23P53172 527 aa4.24□□□□□ -1.73
SNN1YNL086W TIM21P53220 239 aa4.24□□□□□ -1.73
SNN1YNL086W YNR066CP53752 436 aa4.24□□□□□ -1.73
SNN1YNL086W MRX11Q03079 207 aa4.24□□□□□ -1.73
SNN1YNL086W YPL225WQ08971 146 aaKnown RBP4.24□□□□□ -1.73
SNN1YNL086W ATG31Q12421 196 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 47.2 ms