RNA–Protein interactions for RNA: YMR214W

SCJ1, Transcript of One of several homologs of bacterial chaperone DnaJ, yeastyeast

Gene SCJ1, Length 1,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCJ1YMR214W RIB5P38145 238 aa11.89□□□□□ -0.51
SCJ1YMR214W YRA2P36036 203 aaKnown RBP RIP-Chip data11.88□□□□□ -0.51not detected
SCJ1YMR214W VPS55P47111 140 aa11.88□□□□□ -0.51
SCJ1YMR214W PAU4P53427 120 aa11.88□□□□□ -0.51
SCJ1YMR214W CAF40P53829 373 aa11.88□□□□□ -0.51
SCJ1YMR214W CDS1P38221 457 aa11.87□□□□□ -0.51
SCJ1YMR214W CSH1P38287 376 aa11.87□□□□□ -0.51
SCJ1YMR214W DOG2P38773 246 aa11.87□□□□□ -0.51
SCJ1YMR214W DOG1P38774 246 aa11.87□□□□□ -0.51
SCJ1YMR214W YIL024CP40543 189 aa11.87□□□□□ -0.51
SCJ1YMR214W ATG27P46989 271 aa11.87□□□□□ -0.51
SCJ1YMR214W TY1A-DR4O74302 440 aa11.86□□□□□ -0.51
SCJ1YMR214W CDC7P06243 507 aa11.86□□□□□ -0.51
SCJ1YMR214W TY1A-AP0CX57 440 aa11.86□□□□□ -0.51
SCJ1YMR214W TY1A-PR1P0CX58 440 aa11.86□□□□□ -0.51
SCJ1YMR214W TY1A-ORP0CX59 440 aa11.86□□□□□ -0.51
SCJ1YMR214W TY1A-PR2P0CX60 440 aa11.86□□□□□ -0.51
SCJ1YMR214W TY1A-DR5P0CX65 440 aa11.86□□□□□ -0.51
SCJ1YMR214W TY1A-ER2P0CX66 440 aa11.86□□□□□ -0.51
SCJ1YMR214W TY1A-GR3P0CX67 440 aa11.86□□□□□ -0.51
SCJ1YMR214W TY1A-LR1P0CX68 440 aa11.86□□□□□ -0.51
SCJ1YMR214W TY1A-MR2P0CX69 440 aa11.86□□□□□ -0.51
SCJ1YMR214W TY1A-JR2P47099 440 aa11.86□□□□□ -0.51
SCJ1YMR214W TY1A-DR1Q03856 440 aa11.86□□□□□ -0.51
SCJ1YMR214W TY1A-ML1Q04706 440 aaKnown RBP11.86□□□□□ -0.51
SCJ1YMR214W YMR253CQ04835 414 aa11.86□□□□□ -0.51
SCJ1YMR214W GEP3Q08622 556 aa11.86□□□□□ -0.51
SCJ1YMR214W TY1A-BRQ12217 440 aa11.86□□□□□ -0.51
SCJ1YMR214W TY1A-NL2Q12470 440 aa11.86□□□□□ -0.51
SCJ1YMR214W TY1A-GR2Q12485 440 aa11.86□□□□□ -0.51
SCJ1YMR214W PET494P07390 489 aaPredicted RBP11.85□□□□□ -0.51
SCJ1YMR214W DFR1P07807 211 aaKnown RBP RIP-Chip data11.85□□□□□ -0.51not detected
SCJ1YMR214W RPS0AP32905 252 aaKnown RBP11.85□□□□□ -0.51
SCJ1YMR214W RRT1P38192 103 aa11.85□□□□□ -0.51
SCJ1YMR214W SNO1Q03144 224 aa11.85□□□□□ -0.51
SCJ1YMR214W PCC1Q3E833 88 aa11.85□□□□□ -0.51
SCJ1YMR214W TY1A-HP0C2I4 478 aaKnown RBP11.84□□□□□ -0.51
SCJ1YMR214W CNB1P25296 175 aa11.84□□□□□ -0.51
SCJ1YMR214W ALK2P32789 676 aaPredicted RBP11.84□□□□□ -0.51
SCJ1YMR214W AVT5P38176 459 aa11.84□□□□□ -0.51
SCJ1YMR214W PET100P38958 111 aa11.84□□□□□ -0.51
SCJ1YMR214W RTS2P40962 232 aa11.84□□□□□ -0.51
SCJ1YMR214W LOC1P43586 204 aaPredicted RBP11.84□□□□□ -0.51
SCJ1YMR214W DSK2P48510 373 aa11.84□□□□□ -0.51
SCJ1YMR214W PAU1P0CE88 120 aa11.83□□□□□ -0.52
SCJ1YMR214W PAU14P0CE89 120 aa11.83□□□□□ -0.52
SCJ1YMR214W PAU6P0CE90 120 aa11.83□□□□□ -0.52
SCJ1YMR214W PAU18P0CE91 120 aa11.83□□□□□ -0.52
SCJ1YMR214W PAU8P0CE92 120 aa11.83□□□□□ -0.52
SCJ1YMR214W PAU11P0CE93 120 aa11.83□□□□□ -0.52
SCJ1YMR214W PAU13P38725 120 aa11.83□□□□□ -0.52
SCJ1YMR214W SAS2P40963 338 aa11.83□□□□□ -0.52
SCJ1YMR214W PAU10Q03050 120 aa11.83□□□□□ -0.52
SCJ1YMR214W YLR281CQ05863 155 aa11.83□□□□□ -0.52
SCJ1YMR214W PAU20Q08322 120 aa11.83□□□□□ -0.52
SCJ1YMR214W PAU9Q3E770 120 aa11.83□□□□□ -0.52
SCJ1YMR214W RPS2P25443 254 aaKnown RBP11.82□□□□□ -0.52
SCJ1YMR214W TRS20P38334 175 aa11.82□□□□□ -0.52
SCJ1YMR214W SWT21P53873 357 aaPredicted RBP11.82□□□□□ -0.52
SCJ1YMR214W PRM3Q08931 133 aa11.82□□□□□ -0.52
SCJ1YMR214W POP5P28005 173 aa11.81□□□□□ -0.52
SCJ1YMR214W YGR219WP53307 113 aa11.81□□□□□ -0.52
SCJ1YMR214W CAB4P53332 305 aa11.81□□□□□ -0.52
SCJ1YMR214W HST4P53688 370 aa11.81□□□□□ -0.52
SCJ1YMR214W YMR181CQ03231 154 aa11.81□□□□□ -0.52
SCJ1YMR214W ATC1Q04005 294 aa11.81□□□□□ -0.52
SCJ1YMR214W TDH1P00360 332 aaKnown RBP11.8□□□□□ -0.52
SCJ1YMR214W LSM2P38203 95 aaKnown RBP11.8□□□□□ -0.52
SCJ1YMR214W SNU13P39990 126 aaKnown RBP11.8□□□□□ -0.52
SCJ1YMR214W YJL027CP47063 138 aaPredicted RBP11.8□□□□□ -0.52
SCJ1YMR214W ERV2Q12284 196 aa11.8□□□□□ -0.52
SCJ1YMR214W GET2P40056 285 aa11.79□□□□□ -0.52
SCJ1YMR214W CPD1P53314 239 aa11.79□□□□□ -0.52
SCJ1YMR214W MSC3Q05812 728 aa11.79□□□□□ -0.52
SCJ1YMR214W YHR213WP0CI67 198 aa11.78□□□□□ -0.52
SCJ1YMR214W SFT2P38166 215 aa11.78□□□□□ -0.52
SCJ1YMR214W IMD2P38697 523 aaKnown RBP11.78□□□□□ -0.52
SCJ1YMR214W GLE2P40066 365 aa11.78□□□□□ -0.52
SCJ1YMR214W POG1P40473 351 aa11.78□□□□□ -0.52
SCJ1YMR214W AYT1Q12226 474 aa11.78□□□□□ -0.52
SCJ1YMR214W YNR071CP53757 342 aa11.77□□□□□ -0.53
SCJ1YMR214W SDH7Q04401 133 aa11.77□□□□□ -0.53
SCJ1YMR214W LOA1Q06508 300 aa11.77□□□□□ -0.53
SCJ1YMR214W TIM18Q08749 192 aa11.77□□□□□ -0.53
SCJ1YMR214W IMP2P46972 177 aa11.76□□□□□ -0.53
SCJ1YMR214W TOS8P53147 276 aa11.76□□□□□ -0.53
SCJ1YMR214W OCA2P53949 197 aa11.75□□□□□ -0.53
SCJ1YMR214W YPR145C-AQ2V2P0 78 aa11.75□□□□□ -0.53
SCJ1YMR214W COX2P00410 251 aa11.74□□□□□ -0.53
SCJ1YMR214W CYC3P06182 269 aa11.74□□□□□ -0.53
SCJ1YMR214W MDM10P18409 493 aa11.74□□□□□ -0.53
SCJ1YMR214W ACP1P32463 125 aa11.74□□□□□ -0.53
SCJ1YMR214W PHS1P40857 217 aa11.74□□□□□ -0.53
SCJ1YMR214W BNS1P50084 137 aa11.74□□□□□ -0.53
SCJ1YMR214W FIT2Q08906 153 aa11.74□□□□□ -0.53
SCJ1YMR214W SDH4P37298 181 aa11.73□□□□□ -0.53
SCJ1YMR214W MIC12P38341 106 aa11.73□□□□□ -0.53
SCJ1YMR214W GRH1Q04410 372 aaKnown RBP11.73□□□□□ -0.53
SCJ1YMR214W TY1A-LR4P0C2I8 440 aaKnown RBP11.72□□□□□ -0.53
SCJ1YMR214W TY1A-DR6P0CX70 440 aa11.72□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 67.5 ms