RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	LDS1	P31379	325 aa		12.16	□□□□□ -0.46
CCC1	YLR220W	RPL14A	P36105	138 aa	Known RBP	12.16	□□□□□ -0.46
CCC1	YLR220W	RPL14B	P38754	138 aa	Known RBP	12.16	□□□□□ -0.46
CCC1	YLR220W	GLE2	P40066	365 aa		12.16	□□□□□ -0.46
CCC1	YLR220W	RTS2	P40962	232 aa		12.16	□□□□□ -0.46
CCC1	YLR220W	RPA43	P46669	326 aa		12.16	□□□□□ -0.46
CCC1	YLR220W	PAU4	P53427	120 aa		12.16	□□□□□ -0.46
CCC1	YLR220W	ECM25	P32525	599 aa		12.15	□□□□□ -0.46
CCC1	YLR220W	SFT2	P38166	215 aa		12.15	□□□□□ -0.46
CCC1	YLR220W	POR2	P40478	281 aa		12.15	□□□□□ -0.46
CCC1	YLR220W	IMP2	P46972	177 aa		12.15	□□□□□ -0.46
CCC1	YLR220W	YMR181C	Q03231	154 aa		12.15	□□□□□ -0.46
CCC1	YLR220W	AYT1	Q12226	474 aa		12.15	□□□□□ -0.46
CCC1	YLR220W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	12.14	□□□□□ -0.47	not detected
CCC1	YLR220W	NCE103	P53615	221 aa		12.14	□□□□□ -0.47
CCC1	YLR220W	TY1A-BR	Q12217	440 aa		12.14	□□□□□ -0.47
CCC1	YLR220W	SRB6	P32570	121 aa		12.13	□□□□□ -0.47
CCC1	YLR220W	OCA2	P53949	197 aa		12.13	□□□□□ -0.47
CCC1	YLR220W	SME1	Q12330	94 aa	Predicted RBP	12.13	□□□□□ -0.47
CCC1	YLR220W	Q0142	Q9ZZW4	58 aa		12.13	□□□□□ -0.47
CCC1	YLR220W	AGE2	P40529	298 aa		12.12	□□□□□ -0.47
CCC1	YLR220W	LOC1	P43586	204 aa	Predicted RBP	12.12	□□□□□ -0.47
CCC1	YLR220W	MCM22	P47167	239 aa		12.12	□□□□□ -0.47
CCC1	YLR220W	DSK2	P48510	373 aa		12.12	□□□□□ -0.47
CCC1	YLR220W	YNR071C	P53757	342 aa		12.12	□□□□□ -0.47
CCC1	YLR220W	PAU1	P0CE88	120 aa		12.11	□□□□□ -0.47
CCC1	YLR220W	PAU14	P0CE89	120 aa		12.11	□□□□□ -0.47
CCC1	YLR220W	PAU6	P0CE90	120 aa		12.11	□□□□□ -0.47
CCC1	YLR220W	PAU18	P0CE91	120 aa		12.11	□□□□□ -0.47
CCC1	YLR220W	PAU8	P0CE92	120 aa		12.11	□□□□□ -0.47
CCC1	YLR220W	PAU11	P0CE93	120 aa		12.11	□□□□□ -0.47
CCC1	YLR220W	MRP2	P10663	115 aa	Predicted RBP	12.11	□□□□□ -0.47
CCC1	YLR220W	RIB5	P38145	238 aa		12.11	□□□□□ -0.47
CCC1	YLR220W	IMD2	P38697	523 aa	Known RBP	12.11	□□□□□ -0.47
CCC1	YLR220W	PAU13	P38725	120 aa		12.11	□□□□□ -0.47
CCC1	YLR220W	ERV25	P54837	211 aa	Known RBP	12.11	□□□□□ -0.47
CCC1	YLR220W	PAU10	Q03050	120 aa		12.11	□□□□□ -0.47
CCC1	YLR220W	PAU20	Q08322	120 aa		12.11	□□□□□ -0.47
CCC1	YLR220W	ERV2	Q12284	196 aa		12.11	□□□□□ -0.47
CCC1	YLR220W	PAU9	Q3E770	120 aa		12.11	□□□□□ -0.47
CCC1	YLR220W	YHR212W-A	P0CX91	67 aa		12.1	□□□□□ -0.47
CCC1	YLR220W	ERS1	P17261	260 aa		12.1	□□□□□ -0.47
CCC1	YLR220W	LSM2	P38203	95 aa	Known RBP	12.1	□□□□□ -0.47
CCC1	YLR220W	ICS2	P38284	255 aa		12.1	□□□□□ -0.47
CCC1	YLR220W	YPI1	P43587	155 aa		12.1	□□□□□ -0.47
CCC1	YLR220W	SNU13	P39990	126 aa	Known RBP	12.09	□□□□□ -0.47
CCC1	YLR220W	YIL024C	P40543	189 aa		12.09	□□□□□ -0.47
CCC1	YLR220W	TY1A-DR3	Q12441	440 aa		12.09	□□□□□ -0.47
CCC1	YLR220W	DDI2	P0CH63	225 aa		12.08	□□□□□ -0.48
CCC1	YLR220W	DDI3	P0CH64	225 aa		12.08	□□□□□ -0.48
CCC1	YLR220W	MSN1	P22148	382 aa		12.08	□□□□□ -0.48
CCC1	YLR220W	TRS20	P38334	175 aa		12.08	□□□□□ -0.48
CCC1	YLR220W	ISU1	Q03020	165 aa		12.08	□□□□□ -0.48
CCC1	YLR220W	LDS2	Q08218	356 aa		12.08	□□□□□ -0.48
CCC1	YLR220W	TDH1	P00360	332 aa	Known RBP	12.07	□□□□□ -0.48
CCC1	YLR220W	HSP12	P22943	109 aa	Known RBP	12.06	□□□□□ -0.48
CCC1	YLR220W	UTR5	P32630	166 aa		12.06	□□□□□ -0.48
CCC1	YLR220W	MRX11	Q03079	207 aa		12.06	□□□□□ -0.48
CCC1	YLR220W	YMR253C	Q04835	414 aa		12.06	□□□□□ -0.48
CCC1	YLR220W	FIT2	Q08906	153 aa		12.06	□□□□□ -0.48
CCC1	YLR220W	YPR013C	Q12145	317 aa		12.06	□□□□□ -0.48
CCC1	YLR220W	RPS2	P25443	254 aa	Known RBP	12.05	□□□□□ -0.48
CCC1	YLR220W	RPS0A	P32905	252 aa	Known RBP	12.05	□□□□□ -0.48
CCC1	YLR220W	AIM24	P47127	394 aa		12.05	□□□□□ -0.48
CCC1	YLR220W	ATG39	Q06159	398 aa		12.05	□□□□□ -0.48
CCC1	YLR220W	RNA15	P25299	296 aa	Predicted RBP	12.04	□□□□□ -0.48
CCC1	YLR220W	SNF11	P38956	169 aa		12.04	□□□□□ -0.48
CCC1	YLR220W	TIR2	P33890	251 aa		12.03	□□□□□ -0.48
CCC1	YLR220W	AIR2	Q12476	344 aa	Known RBP	12.03	□□□□□ -0.48
CCC1	YLR220W	PHS1	P40857	217 aa		12.02	□□□□□ -0.49
CCC1	YLR220W	LOA1	Q06508	300 aa		12.02	□□□□□ -0.49
CCC1	YLR220W	ATX2	Q12067	313 aa		12.02	□□□□□ -0.49
CCC1	YLR220W	RPS22A	P0C0W1	130 aa	Known RBP	12.01	□□□□□ -0.49
CCC1	YLR220W	YBR144C	P34215	104 aa		12.01	□□□□□ -0.49
CCC1	YLR220W	CAX4	P53223	239 aa		12.01	□□□□□ -0.49
CCC1	YLR220W	UBC7	Q02159	165 aa		12.01	□□□□□ -0.49
CCC1	YLR220W	LRS4	Q04087	347 aa	Known RBP	12.01	□□□□□ -0.49
CCC1	YLR220W	COX2	P00410	251 aa		12	□□□□□ -0.49
CCC1	YLR220W	HMX1	P32339	317 aa		12	□□□□□ -0.49
CCC1	YLR220W	AFR1	P33304	620 aa		12	□□□□□ -0.49
CCC1	YLR220W	POG1	P40473	351 aa		12	□□□□□ -0.49
CCC1	YLR220W	PCC1	Q3E833	88 aa		12	□□□□□ -0.49
CCC1	YLR220W	SEC59	P20048	519 aa		11.99	□□□□□ -0.49
CCC1	YLR220W	YHR173C	P38864	112 aa		11.99	□□□□□ -0.49
CCC1	YLR220W	YIL077C	P40508	320 aa		11.99	□□□□□ -0.49
CCC1	YLR220W	MRS1	P07266	363 aa		11.98	□□□□□ -0.49
CCC1	YLR220W	NNK1	P36003	928 aa		11.98	□□□□□ -0.49
CCC1	YLR220W	CYB5	P40312	120 aa		11.98	□□□□□ -0.49
CCC1	YLR220W	MRPL49	P40858	161 aa	Predicted RBP	11.98	□□□□□ -0.49
CCC1	YLR220W	CNB1	P25296	175 aa		11.97	□□□□□ -0.49
CCC1	YLR220W	BNS1	P50084	137 aa		11.97	□□□□□ -0.49
CCC1	YLR220W	IZH1	Q03419	316 aa		11.97	□□□□□ -0.49
CCC1	YLR220W	YOL160W	Q08321	113 aa		11.97	□□□□□ -0.49
CCC1	YLR220W	TY1A-DR4	O74302	440 aa		11.96	□□□□□ -0.49
CCC1	YLR220W	TY1A-A	P0CX57	440 aa		11.96	□□□□□ -0.49
CCC1	YLR220W	TY1A-PR1	P0CX58	440 aa		11.96	□□□□□ -0.49
CCC1	YLR220W	TY1A-OR	P0CX59	440 aa		11.96	□□□□□ -0.49
CCC1	YLR220W	TY1A-PR2	P0CX60	440 aa		11.96	□□□□□ -0.49
CCC1	YLR220W	TY1A-DR5	P0CX65	440 aa		11.96	□□□□□ -0.49
CCC1	YLR220W	TY1A-ER2	P0CX66	440 aa		11.96	□□□□□ -0.49

Retrieved 100 of 5,963 RNA–protein pairs in 77.7 ms