RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C YRA2P36036 203 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18not detected
YSR3YKR053C SHB17P36136 271 aaKnown RBP7.7□□□□□ -1.18
YSR3YKR053C SFT2P38166 215 aa7.7□□□□□ -1.18
YSR3YKR053C PTC7P38797 343 aa7.7□□□□□ -1.18
YSR3YKR053C ASP1P38986 381 aaPredicted RBP7.7□□□□□ -1.18
YSR3YKR053C ATG27P46989 271 aa7.7□□□□□ -1.18
YSR3YKR053C YDL242WQ07746 117 aa7.7□□□□□ -1.18
YSR3YKR053C IZH3Q07959 543 aa7.7□□□□□ -1.18
YSR3YKR053C AYT1Q12226 474 aa7.7□□□□□ -1.18
YSR3YKR053C PET100P38958 111 aa7.69□□□□□ -1.18
YSR3YKR053C MIC26P50087 233 aa7.69□□□□□ -1.18
YSR3YKR053C YNR066CP53752 436 aa7.69□□□□□ -1.18
YSR3YKR053C UBC7Q02159 165 aa7.69□□□□□ -1.18
YSR3YKR053C YGL194C-AQ2V2P6 80 aa7.69□□□□□ -1.18
YSR3YKR053C UBI4P0CG63 381 aaKnown RBP7.68□□□□□ -1.18
YSR3YKR053C CMC1P36064 111 aa7.68□□□□□ -1.18
YSR3YKR053C SRL3P36167 246 aa7.68□□□□□ -1.18
YSR3YKR053C GCV3P39726 170 aaPredicted RBP7.68□□□□□ -1.18
YSR3YKR053C GPI2P46961 280 aa7.68□□□□□ -1.18
YSR3YKR053C SRB7P47822 140 aa7.68□□□□□ -1.18
YSR3YKR053C YNR071CP53757 342 aa7.68□□□□□ -1.18
YSR3YKR053C MRPS17Q03246 237 aaPredicted RBP7.68□□□□□ -1.18
YSR3YKR053C SCW10Q04951 389 aa7.68□□□□□ -1.18
YSR3YKR053C CTR3Q06686 241 aa7.68□□□□□ -1.18
YSR3YKR053C PRE9P23638 258 aaKnown RBP7.67□□□□□ -1.18
YSR3YKR053C AHT1P29589 182 aa7.67□□□□□ -1.18
YSR3YKR053C ACP1P32463 125 aa7.67□□□□□ -1.18
YSR3YKR053C EMP24P32803 203 aaKnown RBP7.67□□□□□ -1.18
YSR3YKR053C DER1P38307 211 aa7.67□□□□□ -1.18
YSR3YKR053C AIM24P47127 394 aa7.67□□□□□ -1.18
YSR3YKR053C YMR007WQ03675 126 aa7.67□□□□□ -1.18
YSR3YKR053C YPL162CQ12042 273 aa7.66□□□□□ -1.18
YSR3YKR053C YNL146C-AQ3E7Z1 64 aa7.66□□□□□ -1.18
YSR3YKR053C SPO13P23624 291 aa7.65□□□□□ -1.18
YSR3YKR053C CDC50P25656 391 aa7.65□□□□□ -1.18
YSR3YKR053C YBR292CP38357 123 aa7.65□□□□□ -1.18
YSR3YKR053C RIB4P50861 169 aaPredicted RBP7.65□□□□□ -1.18
YSR3YKR053C YIP3P53633 176 aa7.65□□□□□ -1.18
YSR3YKR053C IZH1Q03419 316 aa7.65□□□□□ -1.18
YSR3YKR053C AVO2Q04749 426 aa7.65□□□□□ -1.18
YSR3YKR053C YLR125WQ12138 136 aa7.65□□□□□ -1.18
YSR3YKR053C YOR011W-AQ3E807 68 aa7.65□□□□□ -1.18
YSR3YKR053C DDI2P0CH63 225 aa7.64□□□□□ -1.19
YSR3YKR053C DDI3P0CH64 225 aa7.64□□□□□ -1.19
YSR3YKR053C MLF3P32047 452 aa7.64□□□□□ -1.19
YSR3YKR053C TIR2P33890 251 aa7.64□□□□□ -1.19
YSR3YKR053C LSM2P38203 95 aaKnown RBP7.64□□□□□ -1.19
YSR3YKR053C YIL077CP40508 320 aa7.64□□□□□ -1.19
YSR3YKR053C LCB3P47013 409 aa7.64□□□□□ -1.19
YSR3YKR053C MRPL50P53724 139 aa7.64□□□□□ -1.19
YSR3YKR053C COX12Q01519 83 aa7.64□□□□□ -1.19
YSR3YKR053C JAC1P53193 184 aa7.63□□□□□ -1.19
YSR3YKR053C ATC1Q04005 294 aa7.63□□□□□ -1.19
YSR3YKR053C YOL160WQ08321 113 aa7.63□□□□□ -1.19
YSR3YKR053C PRM7Q12459 698 aa7.63□□□□□ -1.19
YSR3YKR053C ZRC1P20107 442 aa7.62□□□□□ -1.19
YSR3YKR053C CAF40P53829 373 aa7.62□□□□□ -1.19
YSR3YKR053C GEP3Q08622 556 aa7.62□□□□□ -1.19
YSR3YKR053C PHD1P36093 366 aa7.61□□□□□ -1.19
YSR3YKR053C NRG2P38082 220 aa7.61□□□□□ -1.19
YSR3YKR053C YGR025WP53216 100 aa7.61□□□□□ -1.19
YSR3YKR053C MRX11Q03079 207 aa7.61□□□□□ -1.19
YSR3YKR053C YMR244WQ04018 355 aa7.61□□□□□ -1.19
YSR3YKR053C HSP12P22943 109 aaKnown RBP7.6□□□□□ -1.19
YSR3YKR053C GNP1P48813 663 aa7.6□□□□□ -1.19
YSR3YKR053C ISU1Q03020 165 aa7.6□□□□□ -1.19
YSR3YKR053C MRPS8Q03799 155 aa7.6□□□□□ -1.19
YSR3YKR053C YPR063CQ12160 140 aa7.6□□□□□ -1.19
YSR3YKR053C RPS2P25443 254 aaKnown RBP7.59□□□□□ -1.19
YSR3YKR053C DSK2P48510 373 aa7.59□□□□□ -1.19
YSR3YKR053C YCL001W-AP87012 153 aa7.59□□□□□ -1.19
YSR3YKR053C FIT2Q08906 153 aa7.59□□□□□ -1.19
YSR3YKR053C ATX2Q12067 313 aa7.59□□□□□ -1.19
YSR3YKR053C YOR015WQ12169 119 aa7.59□□□□□ -1.19
YSR3YKR053C MDN1Q12019 4910 aaKnown RBP7.59□□□□□ -1.2
YSR3YKR053C CYC7P00045 113 aa7.58□□□□□ -1.2
YSR3YKR053C EMC5P40540 141 aa7.58□□□□□ -1.2
YSR3YKR053C SMD3P43321 101 aaKnown RBP7.58□□□□□ -1.2
YSR3YKR053C LOA1Q06508 300 aa7.58□□□□□ -1.2
YSR3YKR053C YPR145C-AQ2V2P0 78 aa7.58□□□□□ -1.2
YSR3YKR053C YER135CP40082 130 aa7.57□□□□□ -1.2
YSR3YKR053C ADD37Q03233 198 aa7.57□□□□□ -1.2
YSR3YKR053C PLP1Q04004 230 aa7.57□□□□□ -1.2
YSR3YKR053C STP4Q07351 490 aa7.57□□□□□ -1.2
YSR3YKR053C MBB1P39534 108 aa7.56□□□□□ -1.2
YSR3YKR053C MIG3P39943 394 aa7.56□□□□□ -1.2
YSR3YKR053C SPC25P40014 221 aa7.56□□□□□ -1.2
YSR3YKR053C SNX4P47057 423 aa7.56□□□□□ -1.2
YSR3YKR053C MCM22P47167 239 aa7.56□□□□□ -1.2
YSR3YKR053C RDS3Q06835 107 aaPredicted RBP7.56□□□□□ -1.2
YSR3YKR053C MRS1P07266 363 aa7.55□□□□□ -1.2
YSR3YKR053C RPB3P16370 318 aaKnown RBP7.55□□□□□ -1.2
YSR3YKR053C SHG1P38337 142 aa7.55□□□□□ -1.2
YSR3YKR053C PRE5P40302 234 aaKnown RBP7.55□□□□□ -1.2
YSR3YKR053C CCW12Q12127 133 aa7.55□□□□□ -1.2
YSR3YKR053C TY1A-BRQ12217 440 aa7.55□□□□□ -1.2
YSR3YKR053C MRP2P10663 115 aaPredicted RBP7.54□□□□□ -1.2
YSR3YKR053C MRPL20P22354 195 aaPredicted RBP7.54□□□□□ -1.2
YSR3YKR053C TRS20P38334 175 aa7.54□□□□□ -1.2
YSR3YKR053C PHO23P50947 330 aa7.54□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms