RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C SFT2P38166 215 aa8.94□□□□□ -0.98
YKR040CYKR040C SAS2P40963 338 aa8.94□□□□□ -0.98
YKR040CYKR040C YDR274CP87283 123 aa8.94□□□□□ -0.98
YKR040CYKR040C YMR007WQ03675 126 aa8.94□□□□□ -0.98
YKR040CYKR040C TRI1Q05024 226 aa8.94□□□□□ -0.98
YKR040CYKR040C ERS1P17261 260 aa8.93□□□□□ -0.98
YKR040CYKR040C QCR9P22289 66 aa8.93□□□□□ -0.98
YKR040CYKR040C GLE2P40066 365 aa8.93□□□□□ -0.98
YKR040CYKR040C HAM1P47119 197 aaKnown RBP8.93□□□□□ -0.98
YKR040CYKR040C MRPS17Q03246 237 aaPredicted RBP8.93□□□□□ -0.98
YKR040CYKR040C AYT1Q12226 474 aa8.93□□□□□ -0.98
YKR040CYKR040C AHT1P29589 182 aa8.92□□□□□ -0.98
YKR040CYKR040C DER1P38307 211 aa8.92□□□□□ -0.98
YKR040CYKR040C SIM1P40472 476 aa8.92□□□□□ -0.98
YKR040CYKR040C TDA4P47153 279 aa8.92□□□□□ -0.98
YKR040CYKR040C ALG13P53178 202 aa8.92□□□□□ -0.98
YKR040CYKR040C RPS8AP0CX39 200 aaKnown RBP8.91□□□□□ -0.98
YKR040CYKR040C RPS8BP0CX40 200 aaKnown RBP8.91□□□□□ -0.98
YKR040CYKR040C PET100P38958 111 aa8.91□□□□□ -0.98
YKR040CYKR040C IMP2P46972 177 aa8.91□□□□□ -0.98
YKR040CYKR040C FYV6P53913 173 aa8.91□□□□□ -0.98
YKR040CYKR040C UBC7Q02159 165 aa8.91□□□□□ -0.98
YKR040CYKR040C TIR2P33890 251 aa8.9□□□□□ -0.98
YKR040CYKR040C SRL3P36167 246 aa8.9□□□□□ -0.98
YKR040CYKR040C GPI2P46961 280 aa8.9□□□□□ -0.98
YKR040CYKR040C YNR071CP53757 342 aa8.9□□□□□ -0.98
YKR040CYKR040C AVO2Q04749 426 aa8.9□□□□□ -0.98
YKR040CYKR040C CMC1P36064 111 aa8.89□□□□□ -0.99
YKR040CYKR040C LSM2P38203 95 aaKnown RBP8.89□□□□□ -0.99
YKR040CYKR040C YBR292CP38357 123 aa8.89□□□□□ -0.99
YKR040CYKR040C YOR011W-AQ3E807 68 aa8.89□□□□□ -0.99
YKR040CYKR040C FLO5P38894 1075 aa8.88□□□□□ -0.99
YKR040CYKR040C EMC5P40540 141 aa8.88□□□□□ -0.99
YKR040CYKR040C RIB4P50861 169 aaPredicted RBP8.88□□□□□ -0.99
YKR040CYKR040C ADD37Q03233 198 aa8.88□□□□□ -0.99
YKR040CYKR040C ATC1Q04005 294 aa8.88□□□□□ -0.99
YKR040CYKR040C YOR015WQ12169 119 aa8.88□□□□□ -0.99
YKR040CYKR040C YIL077CP40508 320 aa8.87□□□□□ -0.99
YKR040CYKR040C IZH3Q07959 543 aa8.87□□□□□ -0.99
YKR040CYKR040C DDI2P0CH63 225 aa8.86□□□□□ -0.99
YKR040CYKR040C DDI3P0CH64 225 aa8.86□□□□□ -0.99
YKR040CYKR040C ACP1P32463 125 aa8.86□□□□□ -0.99
YKR040CYKR040C LCB3P47013 409 aa8.86□□□□□ -0.99
YKR040CYKR040C GNP1P48813 663 aa8.86□□□□□ -0.99
YKR040CYKR040C CAF40P53829 373 aa8.86□□□□□ -0.99
YKR040CYKR040C RPS2P25443 254 aaKnown RBP8.85□□□□□ -0.99
YKR040CYKR040C MIC26P50087 233 aa8.85□□□□□ -0.99
YKR040CYKR040C YGR025WP53216 100 aa8.85□□□□□ -0.99
YKR040CYKR040C YIP3P53633 176 aa8.85□□□□□ -0.99
YKR040CYKR040C YCL001W-AP87012 153 aa8.85□□□□□ -0.99
YKR040CYKR040C YOL160WQ08321 113 aa8.85□□□□□ -0.99
YKR040CYKR040C YBR298C-AQ8TGK4 73 aa8.85□□□□□ -0.99
YKR040CYKR040C HSP12P22943 109 aaKnown RBP8.84□□□□□ -0.99
YKR040CYKR040C VMA22P38784 181 aa8.84□□□□□ -0.99
YKR040CYKR040C AIM24P47127 394 aa8.84□□□□□ -0.99
YKR040CYKR040C DSK2P48510 373 aa8.84□□□□□ -0.99
YKR040CYKR040C PHO23P50947 330 aa8.84□□□□□ -0.99
YKR040CYKR040C IZH1Q03419 316 aa8.84□□□□□ -0.99
YKR040CYKR040C PRM7Q12459 698 aa8.84□□□□□ -0.99
YKR040CYKR040C AUA1P32450 94 aa8.83□□□□□ -1
YKR040CYKR040C YRA2P36036 203 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
YKR040CYKR040C PHD1P36093 366 aa8.83□□□□□ -1
YKR040CYKR040C SPC25P40014 221 aa8.83□□□□□ -1
YKR040CYKR040C DUO1P53168 247 aaKnown RBP8.83□□□□□ -1
YKR040CYKR040C RPP1AP05318 106 aaPredicted RBP8.82□□□□□ -1
YKR040CYKR040C ZRC1P20107 442 aa8.82□□□□□ -1
YKR040CYKR040C PRE9P23638 258 aaKnown RBP8.82□□□□□ -1
YKR040CYKR040C SNX4P47057 423 aa8.82□□□□□ -1
YKR040CYKR040C YNL146C-AQ3E7Z1 64 aa8.82□□□□□ -1
YKR040CYKR040C SMD3P43321 101 aaKnown RBP8.81□□□□□ -1
YKR040CYKR040C SCW10Q04951 389 aa8.81□□□□□ -1
YKR040CYKR040C FIT2Q08906 153 aa8.81□□□□□ -1
YKR040CYKR040C YPL162CQ12042 273 aa8.81□□□□□ -1
YKR040CYKR040C TRS20P38334 175 aa8.8□□□□□ -1
YKR040CYKR040C MRX11Q03079 207 aa8.8□□□□□ -1
YKR040CYKR040C TMA23Q03525 211 aa8.8□□□□□ -1
YKR040CYKR040C MRP2P10663 115 aaPredicted RBP8.79□□□□□ -1
YKR040CYKR040C RPL14AP36105 138 aaKnown RBP8.79□□□□□ -1
YKR040CYKR040C NRG2P38082 220 aa8.79□□□□□ -1
YKR040CYKR040C RPL14BP38754 138 aaKnown RBP8.79□□□□□ -1
YKR040CYKR040C MBB1P39534 108 aa8.79□□□□□ -1
YKR040CYKR040C COX12Q01519 83 aa8.79□□□□□ -1
YKR040CYKR040C YMR244WQ04018 355 aa8.79□□□□□ -1
YKR040CYKR040C GEP3Q08622 556 aa8.79□□□□□ -1
YKR040CYKR040C SME1Q12330 94 aaPredicted RBP8.79□□□□□ -1
YKR040CYKR040C YPR145C-AQ2V2P0 78 aa8.79□□□□□ -1
YKR040CYKR040C COX19Q3E731 98 aa8.79□□□□□ -1
YKR040CYKR040C YBR085C-AO43137 85 aa8.78□□□□□ -1
YKR040CYKR040C SHG1P38337 142 aa8.78□□□□□ -1
YKR040CYKR040C YER135CP40082 130 aa8.78□□□□□ -1
YKR040CYKR040C ISU1Q03020 165 aa8.78□□□□□ -1
YKR040CYKR040C COA4Q05809 96 aa8.77□□□□□ -1.01
YKR040CYKR040C LOA1Q06508 300 aa8.77□□□□□ -1.01
YKR040CYKR040C SDO1Q07953 250 aaKnown RBP8.77□□□□□ -1.01
YKR040CYKR040C TY1A-BRQ12217 440 aa8.77□□□□□ -1.01
YKR040CYKR040C MLF3P32047 452 aa8.76□□□□□ -1.01
YKR040CYKR040C PRE5P40302 234 aaKnown RBP8.76□□□□□ -1.01
YKR040CYKR040C LOC1P43586 204 aaPredicted RBP8.76□□□□□ -1.01
YKR040CYKR040C PAU4P53427 120 aa8.76□□□□□ -1.01
YKR040CYKR040C ATX2Q12067 313 aa8.76□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms