RNA–Protein interactions for RNA: YKL008C

LAC1, Transcript of Ceramide synthase component, yeastyeast

Gene LAC1, Length 1,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LAC1YKL008C UBR1P19812 1950 aa1.94□□□□□ -2.1
LAC1YKL008C YLR236CA0A023PZG4 107 aa1.93□□□□□ -2.1
LAC1YKL008C RPS27AP35997 82 aaKnown RBP1.93□□□□□ -2.1
LAC1YKL008C RPS27BP38711 82 aa1.93□□□□□ -2.1
LAC1YKL008C RFC4P40339 323 aaKnown RBP1.93□□□□□ -2.1
LAC1YKL008C YMR226CQ05016 267 aaKnown RBP1.93□□□□□ -2.1
LAC1YKL008C YCL012CQ8J0M4 134 aa1.93□□□□□ -2.1
LAC1YKL008C YOR032W-AQ8TGS1 66 aa1.93□□□□□ -2.1
LAC1YKL008C SIR2P06700 562 aa1.92□□□□□ -2.1
LAC1YKL008C RPL27AP0C2H6 136 aaKnown RBP1.92□□□□□ -2.1
LAC1YKL008C SHE2P36068 246 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
LAC1YKL008C RTC4P53850 401 aa1.92□□□□□ -2.1
LAC1YKL008C GGA1Q06336 557 aa1.92□□□□□ -2.1
LAC1YKL008C PRS3P38689 320 aaKnown RBP1.91□□□□□ -2.1
LAC1YKL008C HNT1Q04344 158 aaKnown RBP1.91□□□□□ -2.1
LAC1YKL008C YHL037CP38733 133 aa1.9□□□□□ -2.11
LAC1YKL008C VPS71Q03433 280 aa1.9□□□□□ -2.11
LAC1YKL008C YLR036CQ07986 203 aa1.9□□□□□ -2.11
LAC1YKL008C RAD28Q12021 506 aa1.9□□□□□ -2.11
LAC1YKL008C VMA22P38784 181 aa1.89□□□□□ -2.11
LAC1YKL008C GIM4P40005 111 aaKnown RBP1.89□□□□□ -2.11
LAC1YKL008C GET1P53192 235 aa1.89□□□□□ -2.11
LAC1YKL008C NOP19P53317 196 aaPredicted RBP1.89□□□□□ -2.11
LAC1YKL008C CUE4Q04201 117 aaPredicted RBP1.89□□□□□ -2.11
LAC1YKL008C SWC7Q06707 132 aa1.89□□□□□ -2.11
LAC1YKL008C RIO1Q12196 484 aaKnown RBP1.89□□□□□ -2.11
LAC1YKL008C ADF1Q2V2Q1 113 aa1.89□□□□□ -2.11
LAC1YKL008C YEL028WP39989 153 aa1.88□□□□□ -2.11
LAC1YKL008C MMS2P53152 137 aa1.88□□□□□ -2.11
LAC1YKL008C CGR1P53188 120 aa1.88□□□□□ -2.11
LAC1YKL008C MPC3P53311 146 aa1.88□□□□□ -2.11
LAC1YKL008C NKP2Q06162 153 aa1.88□□□□□ -2.11
LAC1YKL008C GET4Q12125 312 aa1.88□□□□□ -2.11
LAC1YKL008C YDL180WQ12301 547 aa1.88□□□□□ -2.11
LAC1YKL008C OCA6Q12454 224 aa1.88□□□□□ -2.11
LAC1YKL008C POR1P04840 283 aaKnown RBP1.87□□□□□ -2.11
LAC1YKL008C MRS1P07266 363 aa1.87□□□□□ -2.11
LAC1YKL008C SEC11P15367 167 aa1.87□□□□□ -2.11
LAC1YKL008C OCH1P31755 480 aa1.87□□□□□ -2.11
LAC1YKL008C HOP2P53187 214 aa1.87□□□□□ -2.11
LAC1YKL008C MRPS17Q03246 237 aaPredicted RBP1.87□□□□□ -2.11
LAC1YKL008C Q0144Q9ZZW2 109 aa1.87□□□□□ -2.11
LAC1YKL008C MBF1O14467 151 aaKnown RBP1.86□□□□□ -2.11
LAC1YKL008C QCR7P00128 127 aa1.86□□□□□ -2.11
LAC1YKL008C YIR020CP40575 100 aa1.86□□□□□ -2.11
LAC1YKL008C MPA43P53583 542 aaPredicted RBP1.86□□□□□ -2.11
LAC1YKL008C YGR035W-AQ45U48 73 aa1.86□□□□□ -2.11
LAC1YKL008C ODC2Q99297 307 aa1.86□□□□□ -2.11
LAC1YKL008C YFR010W-AP0C5N0 62 aa1.85□□□□□ -2.11
LAC1YKL008C SPO13P23624 291 aa1.85□□□□□ -2.11
LAC1YKL008C CNB1P25296 175 aa1.85□□□□□ -2.11
LAC1YKL008C YCR090CP25654 182 aaKnown RBP1.85□□□□□ -2.11
LAC1YKL008C PAN3P36102 679 aaPredicted RBP1.85□□□□□ -2.11
LAC1YKL008C YER076CP40049 302 aa1.85□□□□□ -2.11
LAC1YKL008C YFL051CP43552 160 aa1.85□□□□□ -2.11
LAC1YKL008C RIM9Q04734 239 aa1.85□□□□□ -2.11
LAC1YKL008C LDB18Q07887 179 aa1.85□□□□□ -2.11
LAC1YKL008C YEA4P40004 342 aa1.84□□□□□ -2.11
LAC1YKL008C SBH2P52871 88 aa1.84□□□□□ -2.11
LAC1YKL008C TIM13P53299 105 aa1.84□□□□□ -2.11
LAC1YKL008C DGA1Q08650 418 aa1.84□□□□□ -2.11
LAC1YKL008C STP22P25604 385 aa1.83□□□□□ -2.12
LAC1YKL008C ASF2P32448 525 aaPredicted RBP1.83□□□□□ -2.12
LAC1YKL008C ARP3P47117 449 aaKnown RBP1.83□□□□□ -2.12
LAC1YKL008C YPR202WQ08993 238 aa1.83□□□□□ -2.12
LAC1YKL008C YNL146C-AQ3E7Z1 64 aa1.83□□□□□ -2.12
LAC1YKL008C SLH1P53327 1967 aaKnown RBP1.82□□□□□ -2.12
LAC1YKL008C AIM2P39721 246 aa1.82□□□□□ -2.12
LAC1YKL008C YER034WP40022 185 aaKnown RBP1.82□□□□□ -2.12
LAC1YKL008C YPL073CP40323 161 aa1.82□□□□□ -2.12
LAC1YKL008C SER2P42941 309 aa1.82□□□□□ -2.12
LAC1YKL008C UBC7Q02159 165 aa1.82□□□□□ -2.12
LAC1YKL008C MIX14Q04341 121 aa1.82□□□□□ -2.12
LAC1YKL008C RTR2Q12378 196 aa1.82□□□□□ -2.12
LAC1YKL008C GTT2Q12390 233 aa1.82□□□□□ -2.12
LAC1YKL008C IGO2Q9P305 131 aa1.82□□□□□ -2.12
LAC1YKL008C SKI6P46948 246 aaPredicted RBP1.81□□□□□ -2.12
LAC1YKL008C GIM3P53900 129 aa1.81□□□□□ -2.12
LAC1YKL008C YMR099CQ03161 297 aaKnown RBP1.81□□□□□ -2.12
LAC1YKL008C TLG1Q03322 224 aa1.81□□□□□ -2.12
LAC1YKL008C GRX3Q03835 250 aa1.81□□□□□ -2.12
LAC1YKL008C YOL014WQ08110 124 aa1.81□□□□□ -2.12
LAC1YKL008C UIP4Q08926 304 aa1.81□□□□□ -2.12
LAC1YKL008C EFG1Q3E705 233 aaKnown RBP1.81□□□□□ -2.12
LAC1YKL008C TAH1P25638 111 aaPredicted RBP1.8□□□□□ -2.12
LAC1YKL008C ADE1P27616 306 aa1.8□□□□□ -2.12
LAC1YKL008C RIO2P40160 425 aaKnown RBP1.8□□□□□ -2.12
LAC1YKL008C YJR111CP47148 283 aaKnown RBP1.8□□□□□ -2.12
LAC1YKL008C YPR174CQ06616 221 aaPredicted RBP1.8□□□□□ -2.12
LAC1YKL008C RAF1Q06891 181 aa1.8□□□□□ -2.12
LAC1YKL008C YHR007C-AQ07074 71 aa1.8□□□□□ -2.12
LAC1YKL008C YRA2P36036 203 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
LAC1YKL008C FIG1P38224 298 aa1.79□□□□□ -2.12
LAC1YKL008C ARO8P53090 500 aaKnown RBP1.79□□□□□ -2.12
LAC1YKL008C YNL184CP53876 108 aa1.79□□□□□ -2.12
LAC1YKL008C YAR023CD6VPM8 179 aa1.78□□□□□ -2.12
LAC1YKL008C YPK2P18961 677 aa1.78□□□□□ -2.12
LAC1YKL008C AIM18P38884 321 aa1.78□□□□□ -2.12
LAC1YKL008C YER134CP40081 178 aa1.78□□□□□ -2.12
LAC1YKL008C SOK1P40317 901 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms