RNA–Protein interactions for RNA: YGR240C

PFK1, Transcript of Alpha subunit of heterooctameric phosphofructokinase, yeastyeast

Gene PFK1, Length 2,964 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFK1YGR240C RPB5P20434 215 aa3.7□□□□□ -1.82
PFK1YGR240C COX10P21592 462 aa3.7□□□□□ -1.82
PFK1YGR240C ASK1P35734 292 aa3.7□□□□□ -1.82
PFK1YGR240C RPL14AP36105 138 aaKnown RBP3.7□□□□□ -1.82
PFK1YGR240C UTP30P36144 274 aaKnown RBP3.7□□□□□ -1.82
PFK1YGR240C RPL13BP40212 199 aaKnown RBP3.7□□□□□ -1.82
PFK1YGR240C YML018CQ03730 393 aa3.7□□□□□ -1.82
PFK1YGR240C MSA1Q08471 629 aa3.7□□□□□ -1.82
PFK1YGR240C STT4P37297 1900 aa3.7□□□□□ -1.82
PFK1YGR240C SDH4P37298 181 aa3.7□□□□□ -1.82
PFK1YGR240C PTI1P39927 425 aaPredicted RBP3.7□□□□□ -1.82
PFK1YGR240C PRM5P40476 318 aa3.7□□□□□ -1.82
PFK1YGR240C ARP3P47117 449 aaKnown RBP3.7□□□□□ -1.82
PFK1YGR240C YGR018CP53211 109 aa3.7□□□□□ -1.82
PFK1YGR240C YOR186WQ08560 144 aa3.7□□□□□ -1.82
PFK1YGR240C YFR010W-AP0C5N0 62 aa3.69□□□□□ -1.82
PFK1YGR240C CKS1P20486 150 aaKnown RBP3.69□□□□□ -1.82
PFK1YGR240C EMP24P32803 203 aaKnown RBP3.69□□□□□ -1.82
PFK1YGR240C IPT1P38954 527 aa3.69□□□□□ -1.82
PFK1YGR240C YIL059CP40520 121 aa3.69□□□□□ -1.82
PFK1YGR240C SCW10Q04951 389 aa3.69□□□□□ -1.82
PFK1YGR240C FCF1Q05498 189 aaPredicted RBP3.69□□□□□ -1.82
PFK1YGR240C YHC1Q05900 231 aaKnown RBP3.69□□□□□ -1.82
PFK1YGR240C Q0255P03881 472 aa3.69□□□□□ -1.82
PFK1YGR240C MRS3P10566 314 aa3.69□□□□□ -1.82
PFK1YGR240C YCR041WP37265 110 aa3.69□□□□□ -1.82
PFK1YGR240C AVT5P38176 459 aa3.69□□□□□ -1.82
PFK1YGR240C LAG1P38703 411 aa3.69□□□□□ -1.82
PFK1YGR240C TEM1P38987 245 aa3.69□□□□□ -1.82
PFK1YGR240C HPA3P39979 161 aa3.69□□□□□ -1.82
PFK1YGR240C SNM1P40993 198 aa3.69□□□□□ -1.82
PFK1YGR240C YGR050CP53231 118 aa3.69□□□□□ -1.82
PFK1YGR240C BUD25P85052 153 aa3.69□□□□□ -1.82
PFK1YGR240C YPL067CQ02754 198 aa3.69□□□□□ -1.82
PFK1YGR240C MSB2P32334 1306 aa3.69□□□□□ -1.82
PFK1YGR240C FMT1P32785 401 aa3.69□□□□□ -1.82
PFK1YGR240C PET8P38921 284 aa3.69□□□□□ -1.82
PFK1YGR240C PST1Q12355 444 aa3.69□□□□□ -1.82
PFK1YGR240C LAS17Q12446 633 aa3.69□□□□□ -1.82
PFK1YGR240C YER145C-AA0A023PYF4 145 aa3.68□□□□□ -1.82
PFK1YGR240C STE4P18851 423 aa3.68□□□□□ -1.82
PFK1YGR240C YBR013CP38215 129 aa3.68□□□□□ -1.82
PFK1YGR240C GGC1P38988 300 aa3.68□□□□□ -1.82
PFK1YGR240C YER181CP40097 107 aa3.68□□□□□ -1.82
PFK1YGR240C YIL012WP40551 113 aa3.68□□□□□ -1.82
PFK1YGR240C PFS2P42841 465 aaKnown RBP3.68□□□□□ -1.82
PFK1YGR240C BAT2P47176 376 aaKnown RBP3.68□□□□□ -1.82
PFK1YGR240C YGL088WP53151 121 aa3.68□□□□□ -1.82
PFK1YGR240C MRH4P53166 561 aa3.68□□□□□ -1.82
PFK1YGR240C IGO1P53897 168 aa3.68□□□□□ -1.82
PFK1YGR240C YDR415CQ04033 374 aaPredicted RBP3.68□□□□□ -1.82
PFK1YGR240C YMR103CQ04436 120 aa3.68□□□□□ -1.82
PFK1YGR240C CCH1P50077 2039 aa3.68□□□□□ -1.82
PFK1YGR240C YPR096CO13587 100 aa3.68□□□□□ -1.82
PFK1YGR240C TOM40P23644 387 aaKnown RBP3.68□□□□□ -1.82
PFK1YGR240C CHS7P38843 316 aa3.68□□□□□ -1.82
PFK1YGR240C DAN1P47178 298 aa3.68□□□□□ -1.82
PFK1YGR240C GTF1P53260 183 aaPredicted RBP3.68□□□□□ -1.82
PFK1YGR240C TRS23Q03784 219 aa3.68□□□□□ -1.82
PFK1YGR240C KEI1Q06346 221 aa3.68□□□□□ -1.82
PFK1YGR240C YHR139C-AO13536 103 aa3.67□□□□□ -1.82
PFK1YGR240C RAD6P06104 172 aa3.67□□□□□ -1.82
PFK1YGR240C YEL073CP39974 107 aa3.67□□□□□ -1.82
PFK1YGR240C YJL213WP40896 331 aa3.67□□□□□ -1.82
PFK1YGR240C ERV29P53337 310 aa3.67□□□□□ -1.82
PFK1YGR240C YNL234WP53857 426 aa3.67□□□□□ -1.82
PFK1YGR240C GPI11Q06636 219 aa3.67□□□□□ -1.82
PFK1YGR240C YOR097CQ12274 175 aaPredicted RBP3.67□□□□□ -1.82
PFK1YGR240C YPL162CQ12042 273 aa3.67□□□□□ -1.82
PFK1YGR240C ATP5P09457 212 aa3.66□□□□□ -1.82
PFK1YGR240C YCR006CP25350 157 aa3.66□□□□□ -1.82
PFK1YGR240C YRA2P36036 203 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
PFK1YGR240C YER188WP40103 239 aa3.66□□□□□ -1.82
PFK1YGR240C YFR045WP43617 309 aa3.66□□□□□ -1.82
PFK1YGR240C PRY1P47032 299 aa3.66□□□□□ -1.82
PFK1YGR240C TDA4P47153 279 aa3.66□□□□□ -1.82
PFK1YGR240C EMC4P53073 190 aa3.66□□□□□ -1.82
PFK1YGR240C YGR151CP53287 111 aa3.66□□□□□ -1.82
PFK1YGR240C CUZ1P53899 274 aa3.66□□□□□ -1.82
PFK1YGR240C HTL1Q9URQ5 78 aa3.66□□□□□ -1.82
PFK1YGR240C CLB6P32943 380 aa3.66□□□□□ -1.82
PFK1YGR240C NRM1P53718 249 aa3.66□□□□□ -1.82
PFK1YGR240C GAL83Q04739 417 aa3.66□□□□□ -1.82
PFK1YGR240C VPS68Q12016 184 aa3.66□□□□□ -1.82
PFK1YGR240C CPA1P07258 411 aaKnown RBP3.66□□□□□ -1.82
PFK1YGR240C LDB16P25587 256 aa3.66□□□□□ -1.82
PFK1YGR240C YAR029WP39549 74 aa3.66□□□□□ -1.82
PFK1YGR240C FMP41P53889 259 aaKnown RBP3.66□□□□□ -1.82
PFK1YGR240C NPC2Q12408 173 aa3.66□□□□□ -1.82
PFK1YGR240C RPL15AP05748 204 aaKnown RBP3.65□□□□□ -1.82
PFK1YGR240C HAP3P13434 144 aa3.65□□□□□ -1.82
PFK1YGR240C LYS5P50113 272 aa3.65□□□□□ -1.82
PFK1YGR240C YGR164WP53291 111 aa3.65□□□□□ -1.82
PFK1YGR240C RPL15BP54780 204 aaPredicted RBP3.65□□□□□ -1.82
PFK1YGR240C YOR292CQ08743 309 aa3.65□□□□□ -1.82
PFK1YGR240C MDM35O60200 86 aa3.65□□□□□ -1.83
PFK1YGR240C RPS14AP06367 137 aaKnown RBP3.65□□□□□ -1.83
PFK1YGR240C FUN14P18411 198 aa3.65□□□□□ -1.83
PFK1YGR240C PDX3P38075 228 aaKnown RBP3.65□□□□□ -1.83
PFK1YGR240C LSM2P38203 95 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms