RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	YJR012C	P47087	207 aa		3.08	□□□□□ -1.92
UBC8	YEL012W	RRG8	Q06109	277 aa		3.08	□□□□□ -1.92
UBC8	YEL012W	BOL1	Q3E793	110 aa		3.08	□□□□□ -1.92
UBC8	YEL012W	YLR365W	Q7LIF2	110 aa		3.08	□□□□□ -1.92
UBC8	YEL012W	MED11	Q99278	115 aa		3.08	□□□□□ -1.92
UBC8	YEL012W	YMR31	P19955	123 aa		3.07	□□□□□ -1.92
UBC8	YEL012W	ZRC1	P20107	442 aa		3.07	□□□□□ -1.92
UBC8	YEL012W	RNP1	P32385	249 aa		3.07	□□□□□ -1.92
UBC8	YEL012W	ALK2	P32789	676 aa	Predicted RBP	3.07	□□□□□ -1.92
UBC8	YEL012W	YUH1	P35127	236 aa		3.07	□□□□□ -1.92
UBC8	YEL012W	MIC12	P38341	106 aa		3.07	□□□□□ -1.92
UBC8	YEL012W	YAR068W	P39564	161 aa		3.07	□□□□□ -1.92
UBC8	YEL012W	FCY21	P40039	528 aa		3.07	□□□□□ -1.92
UBC8	YEL012W	YNL194C	P40169	301 aa		3.07	□□□□□ -1.92
UBC8	YEL012W	YJL218W	P40892	196 aa	Known RBP	3.07	□□□□□ -1.92
UBC8	YEL012W	YAE1	P47118	141 aa	Predicted RBP	3.07	□□□□□ -1.92
UBC8	YEL012W	YIL002W-A	Q3E7Z5	69 aa		3.07	□□□□□ -1.92
UBC8	YEL012W	PET54	P10834	293 aa		3.06	□□□□□ -1.92
UBC8	YEL012W	IFM1	P25038	676 aa		3.06	□□□□□ -1.92
UBC8	YEL012W	PPQ1	P32945	549 aa		3.06	□□□□□ -1.92
UBC8	YEL012W	RFC2	P40348	353 aa		3.06	□□□□□ -1.92
UBC8	YEL012W	DFG10	P40526	253 aa		3.06	□□□□□ -1.92
UBC8	YEL012W	ERG25	P53045	309 aa		3.06	□□□□□ -1.92
UBC8	YEL012W	AGC1	Q12482	902 aa		3.06	□□□□□ -1.92
UBC8	YEL012W	QCR7	P00128	127 aa		3.05	□□□□□ -1.92
UBC8	YEL012W	LDS1	P31379	325 aa		3.05	□□□□□ -1.92
UBC8	YEL012W	RIB7	P33312	244 aa		3.05	□□□□□ -1.92
UBC8	YEL012W	SRY1	P36007	326 aa		3.05	□□□□□ -1.92
UBC8	YEL012W	SMB1	P40018	196 aa	Known RBP	3.05	□□□□□ -1.92
UBC8	YEL012W	MSS2	P40990	351 aa		3.05	□□□□□ -1.92
UBC8	YEL012W	AGX1	P43567	385 aa		3.05	□□□□□ -1.92
UBC8	YEL012W	VMA10	P48836	114 aa	Known RBP	3.05	□□□□□ -1.92
UBC8	YEL012W	MIC26	P50087	233 aa		3.05	□□□□□ -1.92
UBC8	YEL012W	PNC1	P53184	216 aa	Known RBP	3.05	□□□□□ -1.92
UBC8	YEL012W	YGR025W	P53216	100 aa		3.05	□□□□□ -1.92
UBC8	YEL012W	SWT21	P53873	357 aa	Predicted RBP	3.05	□□□□□ -1.92
UBC8	YEL012W	COX12	Q01519	83 aa		3.05	□□□□□ -1.92
UBC8	YEL012W	SPO19	Q03029	223 aa		3.05	□□□□□ -1.92
UBC8	YEL012W	YML018C	Q03730	393 aa		3.05	□□□□□ -1.92
UBC8	YEL012W	VBA1	Q04301	562 aa		3.05	□□□□□ -1.92
UBC8	YEL012W	ATG39	Q06159	398 aa		3.05	□□□□□ -1.92
UBC8	YEL012W	MED4	Q12343	284 aa		3.05	□□□□□ -1.92
UBC8	YEL012W	RPL24B	P24000	155 aa	Known RBP	3.04	□□□□□ -1.92
UBC8	YEL012W	TRR1	P29509	319 aa	Known RBP	3.04	□□□□□ -1.92
UBC8	YEL012W	ACB1	P31787	87 aa		3.04	□□□□□ -1.92
UBC8	YEL012W	CAT5	P41735	233 aa		3.04	□□□□□ -1.92
UBC8	YEL012W	IGD1	P43598	195 aa		3.04	□□□□□ -1.92
UBC8	YEL012W	YLR031W	Q07978	186 aa		3.04	□□□□□ -1.92
UBC8	YEL012W	FMT1	P32785	401 aa		3.03	□□□□□ -1.92
UBC8	YEL012W	MRPL27	P36526	146 aa	Predicted RBP	3.03	□□□□□ -1.92
UBC8	YEL012W	MED8	P38304	223 aa		3.03	□□□□□ -1.92
UBC8	YEL012W	HTD2	P38790	280 aa	Known RBP	3.03	□□□□□ -1.92
UBC8	YEL012W	YHR138C	P38841	114 aa	Predicted RBP	3.03	□□□□□ -1.92
UBC8	YEL012W	GAT4	P40569	121 aa		3.03	□□□□□ -1.92
UBC8	YEL012W	YFR035C	P43608	114 aa		3.03	□□□□□ -1.92
UBC8	YEL012W	ARP3	P47117	449 aa	Known RBP	3.03	□□□□□ -1.92
UBC8	YEL012W	TDA4	P47153	279 aa		3.03	□□□□□ -1.92
UBC8	YEL012W	YGL185C	P53100	379 aa		3.03	□□□□□ -1.92
UBC8	YEL012W	ALG13	P53178	202 aa		3.03	□□□□□ -1.92
UBC8	YEL012W	GPN3	Q06543	272 aa		3.03	□□□□□ -1.92
UBC8	YEL012W	ATG5	Q12380	294 aa		3.03	□□□□□ -1.92
UBC8	YEL012W	PRM4	Q12498	284 aa		3.03	□□□□□ -1.92
UBC8	YEL012W	SAR1	P20606	190 aa	Known RBP	3.02	□□□□□ -1.93
UBC8	YEL012W	BNA6	P43619	295 aa		3.02	□□□□□ -1.93
UBC8	YEL012W	ERV29	P53337	310 aa		3.02	□□□□□ -1.93
UBC8	YEL012W	DYN2	Q02647	92 aa		3.02	□□□□□ -1.93
UBC8	YEL012W	KEI1	Q06346	221 aa		3.02	□□□□□ -1.93
UBC8	YEL012W	HRD1	Q08109	551 aa		3.02	□□□□□ -1.93
UBC8	YEL012W	YOR011W-A	Q3E807	68 aa		3.02	□□□□□ -1.93
UBC8	YEL012W	HOM6	P31116	359 aa	Known RBP	3.01	□□□□□ -1.93
UBC8	YEL012W	PEX22	P39718	180 aa		3.01	□□□□□ -1.93
UBC8	YEL012W	FYV6	P53913	173 aa		3.01	□□□□□ -1.93
UBC8	YEL012W	HAL1	Q01766	294 aa		3.01	□□□□□ -1.93
UBC8	YEL012W	MRPS16	Q02608	121 aa		3.01	□□□□□ -1.93
UBC8	YEL012W	YPL080C	Q02826	108 aa		3.01	□□□□□ -1.93
UBC8	YEL012W	YDR115W	Q04598	105 aa		3.01	□□□□□ -1.93
UBC8	YEL012W	FEX1	Q08913	375 aa		3.01	□□□□□ -1.93
UBC8	YEL012W	FEX2	Q08991	375 aa		3.01	□□□□□ -1.93
UBC8	YEL012W	POP8	P38208	133 aa		3	□□□□□ -1.93
UBC8	YEL012W	COS8	P38723	381 aa		3	□□□□□ -1.93
UBC8	YEL012W	DOG2	P38773	246 aa		3	□□□□□ -1.93
UBC8	YEL012W	DOG1	P38774	246 aa		3	□□□□□ -1.93
UBC8	YEL012W	PDS1	P40316	373 aa	Predicted RBP	3	□□□□□ -1.93
UBC8	YEL012W	IRC18	P47056	224 aa		3	□□□□□ -1.93
UBC8	YEL012W	YPS5	P53057	165 aa		3	□□□□□ -1.93
UBC8	YEL012W	YGR018C	P53211	109 aa		3	□□□□□ -1.93
UBC8	YEL012W	HCH1	P53834	153 aa		3	□□□□□ -1.93
UBC8	YEL012W	THI74	Q04083	370 aa		3	□□□□□ -1.93
UBC8	YEL012W	SYM1	Q06563	197 aa		3	□□□□□ -1.93
UBC8	YEL012W	YPR195C	Q06594	109 aa		3	□□□□□ -1.93
UBC8	YEL012W	PRM7	Q12459	698 aa		3	□□□□□ -1.93
UBC8	YEL012W	PET20	Q99373	253 aa		3	□□□□□ -1.93
UBC8	YEL012W	URA5	P13298	226 aa	Known RBP	2.99	□□□□□ -1.93
UBC8	YEL012W	YKL070W	P36087	169 aa		2.99	□□□□□ -1.93
UBC8	YEL012W	SMP1	P38128	452 aa		2.99	□□□□□ -1.93
UBC8	YEL012W	POR2	P40478	281 aa		2.99	□□□□□ -1.93
UBC8	YEL012W	YJL027C	P47063	138 aa	Predicted RBP	2.99	□□□□□ -1.93
UBC8	YEL012W	ILM1	P47155	203 aa		2.99	□□□□□ -1.93
UBC8	YEL012W	EST3	Q03096	181 aa		2.99	□□□□□ -1.93
UBC8	YEL012W	ADH1	P00330	348 aa	Known RBP	2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms