RNA–Protein interactions for RNA: YBR266C

SLM6, Transcript of Protein with a potential role in actin cytoskeleton organization, yeast

Gene SLM6, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLM6	YBR266C	RIM9	Q04734	239 aa		0.51	□□□□□ -2.33
SLM6	YBR266C	SMD2	Q06217	110 aa	Known RBP	0.51	□□□□□ -2.33
SLM6	YBR266C	YLR046C	Q12253	270 aa		0.51	□□□□□ -2.33
SLM6	YBR266C	TRM3	Q07527	1436 aa		0.5	□□□□□ -2.33
SLM6	YBR266C	PEX34	P25584	144 aa		0.5	□□□□□ -2.33
SLM6	YBR266C	HSP30	P25619	332 aa		0.5	□□□□□ -2.33
SLM6	YBR266C	BUB2	P26448	306 aa	Predicted RBP	0.5	□□□□□ -2.33
SLM6	YBR266C	PTC1	P35182	281 aa		0.5	□□□□□ -2.33
SLM6	YBR266C	FIG1	P38224	298 aa		0.5	□□□□□ -2.33
SLM6	YBR266C	DER1	P38307	211 aa		0.5	□□□□□ -2.33
SLM6	YBR266C	FYV4	P38783	130 aa	Predicted RBP	0.5	□□□□□ -2.33
SLM6	YBR266C	YAR064W	P39563	99 aa		0.5	□□□□□ -2.33
SLM6	YBR266C	YGL101W	P53144	215 aa		0.5	□□□□□ -2.33
SLM6	YBR266C	HSK3	P69852	69 aa		0.5	□□□□□ -2.33
SLM6	YBR266C	TMA20	P89886	181 aa	Predicted RBP	0.5	□□□□□ -2.33
SLM6	YBR266C	THI74	Q04083	370 aa		0.5	□□□□□ -2.33
SLM6	YBR266C	HPT1	Q04178	221 aa	Known RBP	0.5	□□□□□ -2.33
SLM6	YBR266C	HRD1	Q08109	551 aa		0.5	□□□□□ -2.33
SLM6	YBR266C	YPR202W	Q08993	238 aa		0.5	□□□□□ -2.33
SLM6	YBR266C	CCW12	Q12127	133 aa		0.5	□□□□□ -2.33
SLM6	YBR266C	YLR050C	Q12155	161 aa	Known RBP	0.5	□□□□□ -2.33
SLM6	YBR266C	YOR214C	Q12282	236 aa		0.5	□□□□□ -2.33
SLM6	YBR266C	YMR030W-A	Q3E760	96 aa		0.5	□□□□□ -2.33
SLM6	YBR266C	PET20	Q99373	253 aa		0.5	□□□□□ -2.33
SLM6	YBR266C	RAD6	P06104	172 aa		0.49	□□□□□ -2.33
SLM6	YBR266C	FES1	P38260	290 aa		0.49	□□□□□ -2.33
SLM6	YBR266C	SLM6	P38343	150 aa		0.49	□□□□□ -2.33
SLM6	YBR266C	YAP3	P38749	330 aa		0.49	□□□□□ -2.33
SLM6	YBR266C	YEL028W	P39989	153 aa		0.49	□□□□□ -2.33
SLM6	YBR266C	CCS1	P40202	249 aa	Known RBP	0.49	□□□□□ -2.33
SLM6	YBR266C	TTI2	P47168	421 aa		0.49	□□□□□ -2.33
SLM6	YBR266C	YGL193C	P53097	103 aa		0.49	□□□□□ -2.33
SLM6	YBR266C	EFM5	P53200	248 aa	Known RBP	0.49	□□□□□ -2.33
SLM6	YBR266C	HHT1	P61830	136 aa		0.49	□□□□□ -2.33
SLM6	YBR266C	YKR005C	Q02203	525 aa		0.49	□□□□□ -2.33
SLM6	YBR266C	AVO2	Q04749	426 aa		0.49	□□□□□ -2.33
SLM6	YBR266C	YPR127W	Q06494	345 aa		0.49	□□□□□ -2.33
SLM6	YBR266C	YLR053C	Q12026	108 aa		0.49	□□□□□ -2.33
SLM6	YBR266C	RDI1	Q12434	202 aa		0.49	□□□□□ -2.33
SLM6	YBR266C	YOR381W-A	Q3E804	55 aa		0.49	□□□□□ -2.33
SLM6	YBR266C	SPA2	P23201	1466 aa	Known RBP	0.48	□□□□□ -2.33
SLM6	YBR266C	DUR1,2	P32528	1835 aa	Known RBP	0.48	□□□□□ -2.33
SLM6	YBR266C	UBI4	P0CG63	381 aa	Known RBP	0.48	□□□□□ -2.33
SLM6	YBR266C	RPL30	P14120	105 aa	Known RBP	0.48	□□□□□ -2.33
SLM6	YBR266C	UBC6	P33296	250 aa	Predicted RBP	0.48	□□□□□ -2.33
SLM6	YBR266C	MOB1	P40484	314 aa		0.48	□□□□□ -2.33
SLM6	YBR266C	YIL102C	P40488	101 aa		0.48	□□□□□ -2.33
SLM6	YBR266C	GLR1	P41921	483 aa	Known RBP	0.48	□□□□□ -2.33
SLM6	YBR266C	DCV1	P43595	202 aa		0.48	□□□□□ -2.33
SLM6	YBR266C	CCC1	P47818	322 aa		0.48	□□□□□ -2.33
SLM6	YBR266C	ORM1	P53224	222 aa		0.48	□□□□□ -2.33
SLM6	YBR266C	GRX5	Q02784	150 aa		0.48	□□□□□ -2.33
SLM6	YBR266C	SYM1	Q06563	197 aa		0.48	□□□□□ -2.33
SLM6	YBR266C	YOR1	P53049	1477 aa		0.48	□□□□□ -2.33
SLM6	YBR266C	FMP49	A0A023PZB3	126 aa		0.47	□□□□□ -2.33
SLM6	YBR266C	QCR6	P00127	147 aa		0.47	□□□□□ -2.33
SLM6	YBR266C	ATP5	P09457	212 aa		0.47	□□□□□ -2.33
SLM6	YBR266C	PBI2	P0CT04	75 aa	Known RBP	0.47	□□□□□ -2.33
SLM6	YBR266C	PET54	P10834	293 aa		0.47	□□□□□ -2.33
SLM6	YBR266C	MAK31	P23059	88 aa		0.47	□□□□□ -2.33
SLM6	YBR266C	SRP102	P36057	244 aa	Predicted RBP	0.47	□□□□□ -2.33
SLM6	YBR266C	YNL200C	P40165	246 aa	Known RBP	0.47	□□□□□ -2.33
SLM6	YBR266C	XPT1	P47165	209 aa		0.47	□□□□□ -2.33
SLM6	YBR266C	NQM1	P53228	333 aa	Predicted RBP	0.47	□□□□□ -2.33
SLM6	YBR266C	LSM3	P57743	89 aa	Known RBP	0.47	□□□□□ -2.33
SLM6	YBR266C	LIP1	Q03579	150 aa		0.47	□□□□□ -2.33
SLM6	YBR266C	YLR422W	Q06409	1932 aa		0.46	□□□□□ -2.34
SLM6	YBR266C	NUF2	P33895	451 aa		0.46	□□□□□ -2.34
SLM6	YBR266C	HTD2	P38790	280 aa	Known RBP	0.46	□□□□□ -2.34
SLM6	YBR266C	APQ12	P40532	138 aa		0.46	□□□□□ -2.34
SLM6	YBR266C	YJL218W	P40892	196 aa	Known RBP	0.46	□□□□□ -2.34
SLM6	YBR266C	FIP1	P45976	327 aa		0.46	□□□□□ -2.34
SLM6	YBR266C	YJR015W	P47090	510 aa		0.46	□□□□□ -2.34
SLM6	YBR266C	UIP4	Q08926	304 aa		0.46	□□□□□ -2.34
SLM6	YBR266C	YDL157C	Q12082	118 aa		0.46	□□□□□ -2.34
SLM6	YBR266C	NSL1	Q12143	216 aa		0.46	□□□□□ -2.34
SLM6	YBR266C	SPT14	P32363	452 aa		0.45	□□□□□ -2.34
SLM6	YBR266C	SHB17	P36136	271 aa	Known RBP	0.45	□□□□□ -2.34
SLM6	YBR266C	YEL073C	P39974	107 aa		0.45	□□□□□ -2.34
SLM6	YBR266C	YGR269W	P40326	108 aa		0.45	□□□□□ -2.34
SLM6	YBR266C	DLS1	P40366	167 aa		0.45	□□□□□ -2.34
SLM6	YBR266C	YNR064C	P53750	290 aa		0.45	□□□□□ -2.34
SLM6	YBR266C	YML079W	Q03629	201 aa		0.45	□□□□□ -2.34
SLM6	YBR266C	YDL241W	Q07738	123 aa		0.45	□□□□□ -2.34
SLM6	YBR266C	EFG1	Q3E705	233 aa	Known RBP	0.45	□□□□□ -2.34
SLM6	YBR266C	HFA1	P32874	2273 aa		0.45	□□□□□ -2.34
SLM6	YBR266C	ADE6	P38972	1358 aa	Known RBP	0.45	□□□□□ -2.34
SLM6	YBR266C	PRP8	P33334	2413 aa	Known RBP	0.44	□□□□□ -2.34
SLM6	YBR266C	YGL041W-A	P0C5N3	154 aa		0.44	□□□□□ -2.34
SLM6	YBR266C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.44	□□□□□ -2.34	not detected
SLM6	YBR266C	YKR070W	P36151	352 aa	Known RBP	0.44	□□□□□ -2.34
SLM6	YBR266C	CIN5	P40917	295 aa		0.44	□□□□□ -2.34
SLM6	YBR266C	PKR1	Q03880	122 aa	Known RBP	0.44	□□□□□ -2.34
SLM6	YBR266C	RAV2	Q03956	351 aa		0.44	□□□□□ -2.34
SLM6	YBR266C	RRT7	Q07829	113 aa		0.44	□□□□□ -2.34
SLM6	YBR266C	PHO13	P19881	312 aa		0.43	□□□□□ -2.34
SLM6	YBR266C	SRP21	P32342	167 aa		0.43	□□□□□ -2.34
SLM6	YBR266C	MRPL24	P36525	258 aa	Predicted RBP	0.43	□□□□□ -2.34
SLM6	YBR266C	IPI1	P38803	334 aa	Predicted RBP	0.43	□□□□□ -2.34
SLM6	YBR266C	YEL014C	P39999	101 aa		0.43	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms