RNA–Protein interactions for RNA: YBR009C

HHF1, Transcript of Histone H4, yeastyeast

Gene HHF1, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HHF1YBR009C HSL1P34244 1518 aa2.36□□□□□ -2.03
HHF1YBR009C HSP12P22943 109 aaKnown RBP2.35□□□□□ -2.03
HHF1YBR009C DOC1P53068 250 aa2.35□□□□□ -2.03
HHF1YBR009C ADK1P07170 222 aaKnown RBP2.34□□□□□ -2.03
HHF1YBR009C YBL010CP32788 280 aa2.34□□□□□ -2.03
HHF1YBR009C PAM17P36147 197 aa2.34□□□□□ -2.03
HHF1YBR009C RRT1P38192 103 aa2.34□□□□□ -2.03
HHF1YBR009C AIM11P87275 137 aa2.34□□□□□ -2.03
HHF1YBR009C SHH3Q04487 196 aa2.34□□□□□ -2.03
HHF1YBR009C ANT1Q06497 328 aa2.34□□□□□ -2.03
HHF1YBR009C FYV7Q12247 151 aa2.34□□□□□ -2.03
HHF1YBR009C DDI2P0CH63 225 aa2.33□□□□□ -2.04
HHF1YBR009C DDI3P0CH64 225 aa2.33□□□□□ -2.04
HHF1YBR009C NMT1P14743 455 aa2.33□□□□□ -2.04
HHF1YBR009C DDR48P18899 430 aaKnown RBP2.33□□□□□ -2.04
HHF1YBR009C FZF1P32805 299 aa2.33□□□□□ -2.04
HHF1YBR009C MRPS9P38120 278 aa2.33□□□□□ -2.04
HHF1YBR009C YER135CP40082 130 aa2.33□□□□□ -2.04
HHF1YBR009C RIO2P40160 425 aaKnown RBP2.33□□□□□ -2.04
HHF1YBR009C YNR064CP53750 290 aa2.33□□□□□ -2.04
HHF1YBR009C YNR077CP53758 84 aa2.33□□□□□ -2.04
HHF1YBR009C TMA23Q03525 211 aa2.33□□□□□ -2.04
HHF1YBR009C YPL225WQ08971 146 aaKnown RBP2.33□□□□□ -2.04
HHF1YBR009C MYO2P19524 1574 aaKnown RBP2.32□□□□□ -2.04
HHF1YBR009C YEL073CP39974 107 aa2.32□□□□□ -2.04
HHF1YBR009C YER084WP40057 128 aa2.32□□□□□ -2.04
HHF1YBR009C EMC4P53073 190 aa2.32□□□□□ -2.04
HHF1YBR009C GEP7P53171 287 aa2.32□□□□□ -2.04
HHF1YBR009C LIP1Q03579 150 aa2.32□□□□□ -2.04
HHF1YBR009C RIM9Q04734 239 aa2.32□□□□□ -2.04
HHF1YBR009C TVP18Q04767 167 aa2.32□□□□□ -2.04
HHF1YBR009C IRC23Q08416 157 aa2.32□□□□□ -2.04
HHF1YBR009C TY1B-HO13535 1793 aa2.31□□□□□ -2.04
HHF1YBR009C RPS23AP0CX29 145 aaKnown RBP2.31□□□□□ -2.04
HHF1YBR009C RPS23BP0CX30 145 aa2.31□□□□□ -2.04
HHF1YBR009C MRS4P23500 304 aa2.31□□□□□ -2.04
HHF1YBR009C YET1P35723 206 aa2.31□□□□□ -2.04
HHF1YBR009C TVP23P38962 199 aa2.31□□□□□ -2.04
HHF1YBR009C YNL217WP40152 326 aa2.31□□□□□ -2.04
HHF1YBR009C YIL059CP40520 121 aa2.31□□□□□ -2.04
HHF1YBR009C RPL33BP41056 107 aaKnown RBP2.31□□□□□ -2.04
HHF1YBR009C YJL027CP47063 138 aaPredicted RBP2.31□□□□□ -2.04
HHF1YBR009C ELC1Q03071 99 aa2.31□□□□□ -2.04
HHF1YBR009C YDR114CQ04597 100 aa2.31□□□□□ -2.04
HHF1YBR009C YOR381W-AQ3E804 55 aa2.31□□□□□ -2.04
HHF1YBR009C SPP41P38904 1435 aa2.31□□□□□ -2.04
HHF1YBR009C YLR422WQ06409 1932 aa2.3□□□□□ -2.04
HHF1YBR009C YER039C-AP0CD97 72 aa2.3□□□□□ -2.04
HHF1YBR009C YOL162WP0CF19 215 aa2.3□□□□□ -2.04
HHF1YBR009C GPA2P10823 449 aa2.3□□□□□ -2.04
HHF1YBR009C NOP1P15646 327 aaKnown RBP2.3□□□□□ -2.04
HHF1YBR009C SCM4P32564 187 aa2.3□□□□□ -2.04
HHF1YBR009C ETR1P38071 380 aa2.3□□□□□ -2.04
HHF1YBR009C PHS1P40857 217 aa2.3□□□□□ -2.04
HHF1YBR009C SAE3P89114 91 aa2.3□□□□□ -2.04
HHF1YBR009C RRT7Q07829 113 aa2.3□□□□□ -2.04
HHF1YBR009C FEX1Q08913 375 aa2.3□□□□□ -2.04
HHF1YBR009C FEX2Q08991 375 aa2.3□□□□□ -2.04
HHF1YBR009C ATG40Q99325 256 aa2.3□□□□□ -2.04
HHF1YBR009C BUD4P47136 1447 aa2.3□□□□□ -2.04
HHF1YBR009C SPA2P23201 1466 aaKnown RBP2.3□□□□□ -2.04
HHF1YBR009C UBR1P19812 1950 aa2.3□□□□□ -2.04
HHF1YBR009C BUD23P25627 275 aaPredicted RBP2.29□□□□□ -2.04
HHF1YBR009C YPT31P38555 223 aaKnown RBP2.29□□□□□ -2.04
HHF1YBR009C GAT4P40569 121 aa2.29□□□□□ -2.04
HHF1YBR009C RPS12P48589 143 aaKnown RBP2.29□□□□□ -2.04
HHF1YBR009C SAY1P53324 424 aa2.29□□□□□ -2.04
HHF1YBR009C RNH202Q05635 350 aa2.29□□□□□ -2.04
HHF1YBR009C ATG10Q07879 167 aa2.29□□□□□ -2.04
HHF1YBR009C CSI2Q08054 341 aa2.29□□□□□ -2.04
HHF1YBR009C HUT1Q12520 339 aa2.29□□□□□ -2.04
HHF1YBR009C MDH2P22133 377 aa2.28□□□□□ -2.04
HHF1YBR009C YOR062CP36025 268 aa2.28□□□□□ -2.04
HHF1YBR009C SFT2P38166 215 aa2.28□□□□□ -2.04
HHF1YBR009C BOL2P53082 120 aa2.28□□□□□ -2.04
HHF1YBR009C CWC27Q02770 301 aa2.28□□□□□ -2.04
HHF1YBR009C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
HHF1YBR009C FCF2Q12035 217 aaPredicted RBP2.28□□□□□ -2.04
HHF1YBR009C TSC11P40061 1430 aa2.27□□□□□ -2.05
HHF1YBR009C YLR236CA0A023PZG4 107 aa2.27□□□□□ -2.05
HHF1YBR009C RPL26AP05743 127 aaKnown RBP2.27□□□□□ -2.05
HHF1YBR009C KRE1P17260 313 aa2.27□□□□□ -2.05
HHF1YBR009C YCR050CP25630 102 aa2.27□□□□□ -2.05
HHF1YBR009C RPB11P38902 120 aa2.27□□□□□ -2.05
HHF1YBR009C MPM1P40364 252 aa2.27□□□□□ -2.05
HHF1YBR009C TIR3P40552 269 aa2.27□□□□□ -2.05
HHF1YBR009C YIR035CP40579 254 aa2.27□□□□□ -2.05
HHF1YBR009C CIS3P47001 227 aa2.27□□□□□ -2.05
HHF1YBR009C PAC10P48363 199 aa2.27□□□□□ -2.05
HHF1YBR009C SPG1P50088 95 aa2.27□□□□□ -2.05
HHF1YBR009C RPL26BP53221 127 aaKnown RBP2.27□□□□□ -2.05
HHF1YBR009C YLR042CQ07990 161 aa2.27□□□□□ -2.05
HHF1YBR009C UIP4Q08926 304 aa2.27□□□□□ -2.05
HHF1YBR009C KTI11Q3E840 82 aa2.27□□□□□ -2.05
HHF1YBR009C DDP1Q99321 188 aaKnown RBP2.27□□□□□ -2.05
HHF1YBR009C SPS2P08459 502 aa2.26□□□□□ -2.05
HHF1YBR009C ANB1P19211 157 aa2.26□□□□□ -2.05
HHF1YBR009C MIG1P27705 504 aa2.26□□□□□ -2.05
HHF1YBR009C YJR146WP47174 117 aa2.26□□□□□ -2.05
HHF1YBR009C PIR1Q03178 341 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 65.5 ms