RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 EVLQ9UI08 416 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-212ENST00000641247 TPCN1Q9ULQ1 816 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 NBEAQ8NFP9 2946 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 FLNBO75369 2602 aaKnown RBP10.58□□□□□ -0.72
PHGDH-212ENST00000641247 ARID2Q68CP9 1835 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 LOC400499M0QZD8 3231 aa10.58□□□□□ -0.72
PHGDH-212ENST00000641247 ATXN2Q99700 1313 aaKnown RBP10.58□□□□□ -0.72
PHGDH-212ENST00000641247 PDCD11Q14690 1871 aaKnown RBP10.57□□□□□ -0.72
PHGDH-212ENST00000641247 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 PPEF2O14830 753 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 BAG4O95429 457 aaKnown RBP10.57□□□□□ -0.72
PHGDH-212ENST00000641247 DRD1P21728 446 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 MARCKSP29966 332 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-212ENST00000641247 GUCY2FP51841 1108 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 YWHAHQ04917 246 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-212ENST00000641247 STK3Q13188 491 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 ECM1Q16610 540 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 USP39Q53GS9 565 aaKnown RBP10.57□□□□□ -0.72
PHGDH-212ENST00000641247 ANO7Q6IWH7 933 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 TMEM92Q6UXU6 159 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 TMEFF1Q8IYR6 380 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 MAB21L3Q8N8X9 362 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 SPRYD3Q8NCJ5 442 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 MDGA1Q8NFP4 955 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 GIPC2Q8TF65 315 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 ANP32BQ92688 251 aaKnown RBP10.57□□□□□ -0.72
PHGDH-212ENST00000641247 TNFRSF25Q93038 417 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 TRIM44Q96DX7 344 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-212ENST00000641247 INTS4Q96HW7 963 aaKnown RBP10.57□□□□□ -0.72
PHGDH-212ENST00000641247 CCDC43Q96MW1 224 aaKnown RBP10.57□□□□□ -0.72
PHGDH-212ENST00000641247 TMEM60Q9H2L4 133 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 SLC38A7Q9NVC3 462 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 THG1LQ9NWX6 298 aaKnown RBP10.57□□□□□ -0.72
PHGDH-212ENST00000641247 RAXQ9Y2V3 346 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 LAMA1P25391 3075 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 CELSR3Q9NYQ7 3312 aa10.57□□□□□ -0.72
PHGDH-212ENST00000641247 UPK3BL1B0FP48 263 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 UPK3BL2E5RIL1 263 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 K7EQS6 105 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 C1QL1O75973 258 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 CHRM1P11229 460 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-212ENST00000641247 CD59P13987 128 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 PROZP22891 400 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 AARSP49588 968 aaKnown RBP eCLIP10.56□□□□□ -0.72
PHGDH-212ENST00000641247 YARSP54577 528 aaKnown RBP10.56□□□□□ -0.72
PHGDH-212ENST00000641247 PSMD2Q13200 908 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 PLD1Q13393 1074 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 PTPAQ15257 358 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 TXNDC8Q6A555 127 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 SLC23A3Q6PIS1 610 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 MARCH9Q86YJ5 346 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 SFTPA1Q8IWL2 248 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 ABCA7Q8IZY2 2146 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 STKLD1Q8NE28 680 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 TSTD1Q8NFU3 115 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 OR10T2Q8NGX3 314 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 OLIG1Q8TAK6 271 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 USP33Q8TEY7 942 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 ACAP3Q96P50 834 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 CCDC94Q9BW85 323 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-212ENST00000641247 ECT2Q9H8V3 914 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 ASB3Q9Y575 518 aa10.56□□□□□ -0.72
PHGDH-212ENST00000641247 CACNA1EQ15878 2313 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 K7ERI5 159 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 F11P03951 625 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 HMGA1P17096 107 aaKnown RBP10.55□□□□□ -0.72
PHGDH-212ENST00000641247 DDIT3P35638 169 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 MESP2Q0VG99 397 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 LMAN2Q12907 356 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 ZBTB6Q15916 424 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 CALCRLQ16602 461 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 ME3Q16798 604 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 ZNF568Q3ZCX4 644 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 FBXO43Q4G163 708 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 ARHGAP15Q53QZ3 475 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 C2orf27AQ580R0 203 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 CCNI2Q6ZMN8 369 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-212ENST00000641247 LRRTM3Q86VH5 581 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 CCDC33Q8N5R6 958 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 DEFB119Q8N690 84 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 CD101Q93033 1021 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 CNOT6LQ96LI5 555 aaKnown RBP10.55□□□□□ -0.72
PHGDH-212ENST00000641247 HAPLN2Q9GZV7 340 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 LINC00597Q9H2U6 94 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 TOPORSQ9NS56 1045 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-212ENST00000641247 ANKFY1Q9P2R3 1169 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 IGSF10Q6WRI0 2623 aa10.55□□□□□ -0.72
PHGDH-212ENST00000641247 SPAG17Q6Q759 2223 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 OR6C75A6NL08 312 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 H0Y626 953 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 TNFRSF10BO14763 440 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 TRIM16O95361 564 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 HARSP12081 509 aaKnown RBP10.54□□□□□ -0.72
PHGDH-212ENST00000641247 ITPKAP23677 461 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 LRPAP1P30533 357 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 P2RY2P41231 377 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 GPR15P49685 360 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 SEC13P55735 322 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 SCRN1Q12765 414 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 SKOR2Q2VWA4 1001 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms