RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 SHCBP1LQ9BZQ2 653 aa15.32■□□□□ 0.04
VPS36-207ENST00000611132 A8MUI8 341 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 DGAT1O75907 488 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 PYGBP11216 843 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 FAM47CQ5HY64 1035 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 MROH9Q5TGP6 573 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 RBM46Q8TBY0 533 aaKnown RBP15.31■□□□□ 0.04
VPS36-207ENST00000611132 DHX38Q92620 1227 aaKnown RBP15.31■□□□□ 0.04
VPS36-207ENST00000611132 NMD3Q96D46 503 aaKnown RBP15.31■□□□□ 0.04
VPS36-207ENST00000611132 MXRA8Q9BRK3 442 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 KLHL8Q9P2G9 620 aaPredicted RBP15.31■□□□□ 0.04
VPS36-207ENST00000611132 CHD2O14647 1828 aaKnown RBP15.31■□□□□ 0.04
VPS36-207ENST00000611132 F5H423 210 aaPredicted RBP15.31■□□□□ 0.04
VPS36-207ENST00000611132 PIGWQ7Z7B1 504 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 NOP9Q86U38 636 aaKnown RBP15.31■□□□□ 0.04
VPS36-207ENST00000611132 ZCCHC9Q8N567 271 aaKnown RBP15.31■□□□□ 0.04
VPS36-207ENST00000611132 UNC45AQ9H3U1 944 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 RSAD1Q9HA92 442 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 GTSE1Q9NYZ3 720 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 TRPC5Q9UL62 973 aaPredicted RBP15.31■□□□□ 0.04
VPS36-207ENST00000611132 TBX20Q9UMR3 447 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 BLMHQ13867 455 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 PLA2G4FQ68DD2 849 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 C16orf89Q6UX73 402 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.31■□□□□ 0.04
VPS36-207ENST00000611132 MCOLN2Q8IZK6 566 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 BFARQ9NZS9 450 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 GPC3P51654 580 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 SESN2P58004 480 aaPredicted RBP15.31■□□□□ 0.04
VPS36-207ENST00000611132 EVX2Q03828 476 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 PDK4Q16654 411 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 EFHC1Q5JVL4 640 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.31■□□□□ 0.04
VPS36-207ENST00000611132 PARD3BQ8TEW8 1205 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 TRAPPC9Q96Q05 1148 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 KLHL4Q9C0H6 718 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 PCDH9Q9HC56 1237 aa15.31■□□□□ 0.04
VPS36-207ENST00000611132 ABLIM1O14639 778 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 STIP1P31948 543 aaKnown RBP15.3■□□□□ 0.04
VPS36-207ENST00000611132 RPA3P35244 121 aaPredicted RBP15.3■□□□□ 0.04
VPS36-207ENST00000611132 EXOC8Q8IYI6 725 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 FITM2Q8N6M3 262 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 OXNAD1Q96HP4 312 aaPredicted RBP15.3■□□□□ 0.04
VPS36-207ENST00000611132 CCT7Q99832 543 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 SLCO1B3Q9NPD5 702 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 CHCHD3Q9NX63 227 aaKnown RBP15.3■□□□□ 0.04
VPS36-207ENST00000611132 ARHGAP26Q9UNA1 814 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 IGBP1P78318 339 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 CDK16Q00536 496 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 EFTUD2Q15029 972 aaKnown RBP eCLIP15.3■□□□□ 0.04
VPS36-207ENST00000611132 RAB44Q7Z6P3 723 aaPredicted RBP15.3■□□□□ 0.04
VPS36-207ENST00000611132 NIM1KQ8IY84 436 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 TMEM109Q9BVC6 243 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 ASTN1O14525 1302 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 ZC3H11AO75152 810 aaKnown RBP eCLIP15.3■□□□□ 0.04
VPS36-207ENST00000611132 VCAM1P19320 739 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 GTF2H1P32780 548 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 CHKAP35790 457 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 OTUD4Q01804 1114 aaKnown RBP15.3■□□□□ 0.04
VPS36-207ENST00000611132 R3HDM1Q15032 1099 aaKnown RBP15.3■□□□□ 0.04
VPS36-207ENST00000611132 SLC10A5Q5PT55 438 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 C6orf89Q6UWU4 347 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 ETNPPLQ8TBG4 499 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 AKAP12Q02952 1782 aa15.3■□□□□ 0.04
VPS36-207ENST00000611132 CLPTM1O96005 669 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 NPR1P16066 1061 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 VCPP55072 806 aaKnown RBP15.29■□□□□ 0.04
VPS36-207ENST00000611132 GPAT2Q6NUI2 795 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 SPOCD1Q6ZMY3 1216 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 EPS8L1Q8TE68 723 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 NLRP4Q96MN2 994 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 LRMDAQ9H2I8 198 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 PIK3R2O00459 728 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 NEMP1O14524 444 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 DDX3YO15523 660 aaKnown RBP15.29■□□□□ 0.04
VPS36-207ENST00000611132 SSTR1P30872 391 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 OCA2Q04671 838 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 SLC26A11Q86WA9 606 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 JADE3Q92613 823 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 CNKSR1Q969H4 720 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 FRMD8P1Q9BZ68 369 aaPredicted RBP15.29■□□□□ 0.04
VPS36-207ENST00000611132 DHX35Q9H5Z1 703 aaKnown RBP15.29■□□□□ 0.04
VPS36-207ENST00000611132 ARMCX1Q9P291 453 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 CDY2AQ9Y6F7 541 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 CDY1Q9Y6F8 540 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 MRPS9P82933 396 aaKnown RBP15.29■□□□□ 0.04
VPS36-207ENST00000611132 CUL2Q13617 745 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 FAM182BQ5T319 152 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 FAM13CQ8NE31 585 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 ZNF398Q8TD17 642 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 DDI1Q8WTU0 396 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 SNRNP27Q8WVK2 155 aaKnown RBP15.29■□□□□ 0.04
VPS36-207ENST00000611132 ATXN7L3BQ96GX2 97 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 KIFC3Q9BVG8 833 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 KCNH7Q9NS40 1196 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 WARS2Q9UGM6 360 aaKnown RBP15.29■□□□□ 0.04
VPS36-207ENST00000611132 IPO11Q9UI26 975 aaKnown RBP15.29■□□□□ 0.04
VPS36-207ENST00000611132 PDGFRAP16234 1089 aa15.29■□□□□ 0.04
VPS36-207ENST00000611132 ZFXP17010 805 aaPredicted RBP15.29■□□□□ 0.04
VPS36-207ENST00000611132 ACTR2P61160 394 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms