RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 CRHR2Q13324 411 aa11□□□□□ -0.65
VPS25-203ENST00000589520 ZNF211Q13398 564 aaPredicted RBP11□□□□□ -0.65
VPS25-203ENST00000589520 SNX17Q15036 470 aa11□□□□□ -0.65
VPS25-203ENST00000589520 CCNG2Q16589 344 aa11□□□□□ -0.65
VPS25-203ENST00000589520 PTPROQ16827 1216 aa11□□□□□ -0.65
VPS25-203ENST00000589520 HADHQ16836 314 aaKnown RBP11□□□□□ -0.65
VPS25-203ENST00000589520 XKR4Q5GH76 650 aa11□□□□□ -0.65
VPS25-203ENST00000589520 PPP1R15BQ5SWA1 713 aa11□□□□□ -0.65
VPS25-203ENST00000589520 PRPF38BQ5VTL8 546 aaKnown RBP11□□□□□ -0.65
VPS25-203ENST00000589520 DUPD1Q68J44 220 aa11□□□□□ -0.65
VPS25-203ENST00000589520 CCDC137Q6PK04 289 aaKnown RBP11□□□□□ -0.65
VPS25-203ENST00000589520 LCLAT1Q6UWP7 414 aa11□□□□□ -0.65
VPS25-203ENST00000589520 CEP128Q6ZU80 1094 aa11□□□□□ -0.65
VPS25-203ENST00000589520 DPH6Q7L8W6 267 aa11□□□□□ -0.65
VPS25-203ENST00000589520 POLNQ7Z5Q5 900 aa11□□□□□ -0.65
VPS25-203ENST00000589520 RPAINQ86UA6 219 aa11□□□□□ -0.65
VPS25-203ENST00000589520 PASD1Q8IV76 773 aa11□□□□□ -0.65
VPS25-203ENST00000589520 IQCKQ8N0W5 287 aa11□□□□□ -0.65
VPS25-203ENST00000589520 WDTC1Q8N5D0 677 aa11□□□□□ -0.65
VPS25-203ENST00000589520 PRELID2Q8N945 189 aa11□□□□□ -0.65
VPS25-203ENST00000589520 SLC4A11Q8NBS3 891 aa11□□□□□ -0.65
VPS25-203ENST00000589520 BBOF1Q8ND07 529 aa11□□□□□ -0.65
VPS25-203ENST00000589520 ATL2Q8NHH9 583 aa11□□□□□ -0.65
VPS25-203ENST00000589520 CCHCR1Q8TD31 782 aa11□□□□□ -0.65
VPS25-203ENST00000589520 IPO4Q8TEX9 1081 aaKnown RBP11□□□□□ -0.65
VPS25-203ENST00000589520 DNAJB3Q8WWF6 145 aa11□□□□□ -0.65
VPS25-203ENST00000589520 DDX27Q96GQ7 796 aaKnown RBP11□□□□□ -0.65
VPS25-203ENST00000589520 BTBD6Q96KE9 485 aa11□□□□□ -0.65
VPS25-203ENST00000589520 ZNF560Q96MR9 790 aa11□□□□□ -0.65
VPS25-203ENST00000589520 FRMD8P1Q9BZ68 369 aaPredicted RBP11□□□□□ -0.65
VPS25-203ENST00000589520 UPF3AQ9H1J1 476 aaKnown RBP11□□□□□ -0.65
VPS25-203ENST00000589520 CREBZFQ9NS37 354 aa11□□□□□ -0.65
VPS25-203ENST00000589520 WBP1LQ9NX94 342 aa11□□□□□ -0.65
VPS25-203ENST00000589520 SNTG2Q9NY99 539 aa11□□□□□ -0.65
VPS25-203ENST00000589520 MTRF1LQ9UGC7 380 aaKnown RBP11□□□□□ -0.65
VPS25-203ENST00000589520 POLIQ9UNA4 740 aa11□□□□□ -0.65
VPS25-203ENST00000589520 ZSWIM8A7E2V4 1837 aa11□□□□□ -0.65
VPS25-203ENST00000589520 TRPM7Q96QT4 1865 aa11□□□□□ -0.65
VPS25-203ENST00000589520 CASP8AP2Q9UKL3 1982 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 TTI1O43156 1089 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 CSDE1O75534 798 aaKnown RBP10.99□□□□□ -0.65
VPS25-203ENST00000589520 ECEL1O95672 775 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 SYF2O95926 243 aaKnown RBP10.99□□□□□ -0.65
VPS25-203ENST00000589520 KRT7P08729 469 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 RARAP10276 462 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 KRT3P12035 628 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 PAX3P23760 479 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 PTGIRP43119 386 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 VEGFBP49765 207 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 CAV1Q03135 178 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 CCL14Q16627 93 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 ZNF394Q53GI3 561 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 ODF2Q5BJF6 829 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 SESTD1Q86VW0 696 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 JAMLQ86YT9 394 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 ZDHHC17Q8IUH5 632 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 CCDC105Q8IYK2 499 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 STK32AQ8WU08 396 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 TFAP2BQ92481 460 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 HEXIM2Q96MH2 286 aaKnown RBP10.99□□□□□ -0.65
VPS25-203ENST00000589520 PPP1R16BQ96T49 567 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 OSMRQ99650 979 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 SH3GL2Q99962 352 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 CELF4Q9BZC1 486 aaKnown RBP10.99□□□□□ -0.65
VPS25-203ENST00000589520 SYNCQ9H7C4 482 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 CYLDQ9NQC7 956 aa10.99□□□□□ -0.65
VPS25-203ENST00000589520 CHORDC1Q9UHD1 332 aaPredicted RBP10.99□□□□□ -0.65
VPS25-203ENST00000589520 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.99□□□□□ -0.65
VPS25-203ENST00000589520 MEFVO15553 781 aaPredicted RBP10.98□□□□□ -0.65
VPS25-203ENST00000589520 SEPT4O43236 478 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 TREHO43280 583 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 DAPK3O43293 454 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 ECM2O94769 699 aaPredicted RBP10.98□□□□□ -0.65
VPS25-203ENST00000589520 MICAL2O94851 1124 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 TJP3O95049 919 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 GAS8O95995 478 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 CFHP08603 1231 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 RARBP10826 455 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 CYBAP13498 195 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 ITIH2P19823 946 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 HOXD10P28358 340 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 GGCXP38435 758 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 GPD2P43304 727 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 EIF3BP55884 814 aaKnown RBP10.98□□□□□ -0.65
VPS25-203ENST00000589520 SLMAPQ14BN4 828 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 SIX1Q15475 284 aaPredicted RBP10.98□□□□□ -0.65
VPS25-203ENST00000589520 ARHGAP17Q68EM7 881 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 DENND1BQ6P3S1 775 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 DRICH1Q6PGQ1 229 aaPredicted RBP10.98□□□□□ -0.65
VPS25-203ENST00000589520 SCARA5Q6ZMJ2 495 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 RUFY4Q6ZNE9 571 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 FAM43BQ6ZT52 329 aaPredicted RBP10.98□□□□□ -0.65
VPS25-203ENST00000589520 MCRS1Q96EZ8 462 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 ELOVL4Q9GZR5 314 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 SDCBP2Q9H190 292 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 SLC38A7Q9NVC3 462 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 ASNSD1Q9NWL6 643 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 GDAP2Q9NXN4 497 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 WHRNQ9P202 907 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 GINS2Q9Y248 185 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms