RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 WSCD1Q658N2 575 aa14.02□□□□□ -0.17
SF3B3-202ENST00000562722 DYMQ7RTS9 669 aa14.02□□□□□ -0.17
SF3B3-202ENST00000562722 BRAPQ7Z569 592 aa14.02□□□□□ -0.17
SF3B3-202ENST00000562722 LONP2Q86WA8 852 aa14.02□□□□□ -0.17
SF3B3-202ENST00000562722 DCP1BQ8IZD4 617 aaKnown RBP14.02□□□□□ -0.17
SF3B3-202ENST00000562722 SPPL2BQ8TCT7 592 aa14.02□□□□□ -0.17
SF3B3-202ENST00000562722 C2orf15Q8WU43 125 aaKnown RBP14.02□□□□□ -0.17
SF3B3-202ENST00000562722 ZNF560Q96MR9 790 aa14.02□□□□□ -0.17
SF3B3-202ENST00000562722 RTKNQ9BST9 563 aa14.02□□□□□ -0.17
SF3B3-202ENST00000562722 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.02□□□□□ -0.17
SF3B3-202ENST00000562722 CEP250Q9BV73 2442 aa14.02□□□□□ -0.17
SF3B3-202ENST00000562722 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.01□□□□□ -0.17
SF3B3-202ENST00000562722 VPS37CA5D8V6 355 aaPredicted RBP14.01□□□□□ -0.17
SF3B3-202ENST00000562722 HRO43593 1189 aa14.01□□□□□ -0.17
SF3B3-202ENST00000562722 TGM1P22735 817 aa14.01□□□□□ -0.17
SF3B3-202ENST00000562722 CNR2P34972 360 aa14.01□□□□□ -0.17
SF3B3-202ENST00000562722 DDIT3P35638 169 aa14.01□□□□□ -0.17
SF3B3-202ENST00000562722 AVPR1AP37288 418 aa14.01□□□□□ -0.17
SF3B3-202ENST00000562722 TFAMQ00059 246 aaKnown RBP14.01□□□□□ -0.17
SF3B3-202ENST00000562722 TSPY1Q01534 308 aa14.01□□□□□ -0.17
SF3B3-202ENST00000562722 BFSP1Q12934 665 aa14.01□□□□□ -0.17
SF3B3-202ENST00000562722 PTPAQ15257 358 aa14.01□□□□□ -0.17
SF3B3-202ENST00000562722 ITPRIPL2Q3MIP1 535 aa14.01□□□□□ -0.17
SF3B3-202ENST00000562722 SFR1Q86XK3 245 aa14.01□□□□□ -0.17
SF3B3-202ENST00000562722 NOC3LQ8WTT2 800 aaKnown RBP14.01□□□□□ -0.17
SF3B3-202ENST00000562722 FIZ1Q96SL8 496 aa14.01□□□□□ -0.17
SF3B3-202ENST00000562722 MRPL44Q9H9J2 332 aaKnown RBP14.01□□□□□ -0.17
SF3B3-202ENST00000562722 MAGED2Q9UNF1 606 aaPredicted RBP14.01□□□□□ -0.17
SF3B3-202ENST00000562722 EXOC7Q9UPT5 735 aa14.01□□□□□ -0.17
SF3B3-202ENST00000562722 PCDHB5Q9Y5E4 795 aa14.01□□□□□ -0.17
SF3B3-202ENST00000562722 FRYLO94915 3013 aa14.01□□□□□ -0.17
SF3B3-202ENST00000562722 KPNA7A9QM74 516 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 K7ESF4 209 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 PRPF40AO75400 957 aaKnown RBP14□□□□□ -0.17
SF3B3-202ENST00000562722 IL18RAPO95256 599 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 HAPLN1P10915 354 aaPredicted RBP14□□□□□ -0.17
SF3B3-202ENST00000562722 KCNA4P22459 653 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 TXLNAP40222 546 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 POSTNQ15063 836 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 ZNF720Q7Z2F6 126 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 LRRTM3Q86VH5 581 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 EFCAB13Q8IY85 973 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 CMTM8Q8IZV2 173 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 SYNPOQ8N3V7 929 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 MAB21L3Q8N8X9 362 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 TTC16Q8NEE8 873 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 NETO1Q8TDF5 533 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 HVCN1Q96D96 273 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 FAM213AQ9BRX8 229 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 PI4K2AQ9BTU6 479 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 SLC46A2Q9BY10 475 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 IKZF4Q9H2S9 585 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 IL21Q9HBE4 155 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 GKN1Q9NS71 199 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 SEMA4GQ9NTN9 838 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 C2orf42Q9NWW7 574 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 TBC1D7Q9P0N9 293 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 CCDC39Q9UFE4 941 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 STYXL1Q9Y6J8 313 aa14□□□□□ -0.17
SF3B3-202ENST00000562722 TSC2P49815 1807 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 LRP3O75074 770 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 PAPSS2O95340 614 aaPredicted RBP13.99□□□□□ -0.17
SF3B3-202ENST00000562722 WEE1P30291 646 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 POLR2BP30876 1174 aaKnown RBP13.99□□□□□ -0.17
SF3B3-202ENST00000562722 PNPLA4P41247 253 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 GPR15P49685 360 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 GRSF1Q12849 480 aaKnown RBP eCLIP13.99□□□□□ -0.17
SF3B3-202ENST00000562722 CCINQ13939 588 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 WDR44Q5JSH3 913 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 CC2D1AQ6P1N0 951 aaPredicted RBP13.99□□□□□ -0.17
SF3B3-202ENST00000562722 PRR23CQ6ZRP0 262 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 NT5DC4Q86YG4 428 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 SYCP3Q8IZU3 236 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 MRPS31Q92665 395 aaKnown RBP13.99□□□□□ -0.17
SF3B3-202ENST00000562722 SAAL1Q96ER3 474 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 EPSTI1Q96J88 318 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 CNTNAP3BQ96NU0 1288 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 ACCSQ96QU6 501 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 CNTNAP3Q9BZ76 1288 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 CCSER1Q9C0I3 900 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 ST6GALNAC4Q9H4F1 302 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 ZMYM5Q9UJ78 669 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 AGAP1Q9UPQ3 857 aa13.99□□□□□ -0.17
SF3B3-202ENST00000562722 EXTL3O43909 919 aa13.98□□□□□ -0.17
SF3B3-202ENST00000562722 HUS1O60921 280 aa13.98□□□□□ -0.17
SF3B3-202ENST00000562722 GCNT3O95395 438 aa13.98□□□□□ -0.17
SF3B3-202ENST00000562722 ITGB3P05106 788 aa13.98□□□□□ -0.17
SF3B3-202ENST00000562722 KRT19P08727 400 aa13.98□□□□□ -0.17
SF3B3-202ENST00000562722 DDX6P26196 483 aaKnown RBP eCLIP13.98□□□□□ -0.172e-6■□□□□ 10.5
SF3B3-202ENST00000562722 PXNP49023 591 aaPredicted RBP13.98□□□□□ -0.17
SF3B3-202ENST00000562722 NLRP12P59046 1061 aa13.98□□□□□ -0.17
SF3B3-202ENST00000562722 AMPD2Q01433 879 aa13.98□□□□□ -0.17
SF3B3-202ENST00000562722 POU5F1Q01860 360 aaKnown RBP13.98□□□□□ -0.17
SF3B3-202ENST00000562722 RUNX3Q13761 415 aa13.98□□□□□ -0.17
SF3B3-202ENST00000562722 CSRP2Q16527 193 aa13.98□□□□□ -0.17
SF3B3-202ENST00000562722 NFE2Q16621 373 aaPredicted RBP13.98□□□□□ -0.17
SF3B3-202ENST00000562722 SDHAF4Q5VUM1 108 aa13.98□□□□□ -0.17
SF3B3-202ENST00000562722 RRAGBQ5VZM2 374 aa13.98□□□□□ -0.17
SF3B3-202ENST00000562722 TXNDC8Q6A555 127 aa13.98□□□□□ -0.17
SF3B3-202ENST00000562722 TRIM68Q6AZZ1 485 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms