RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 COG8Q96MW5 612 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 CD244Q9BZW8 370 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 PRDM13Q9H4Q3 707 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 CTNNA3Q9UI47 895 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 TMEFF2Q9UIK5 374 aaPredicted RBP6.88□□□□□ -1.31
VPS29-210ENST00000552130 MOSPD1Q9UJG1 213 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 FAM47E-STBD1D6RA91 191 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 PODXLO00592 558 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 SPTLC2O15270 562 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 KIF5CO60282 957 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 SLC22A3O75751 556 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 BEST1O76090 585 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 TPPPO94811 219 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 ENDOD1O94919 500 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 SLU7O95391 586 aaKnown RBP6.87□□□□□ -1.31
VPS29-210ENST00000552130 ATP5BP06576 529 aaKnown RBP6.87□□□□□ -1.31
VPS29-210ENST00000552130 QDPRP09417 244 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 CSH1P0DML2 217 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 CSH2P0DML3 217 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 PTX3P26022 381 aaPredicted RBP6.87□□□□□ -1.31
VPS29-210ENST00000552130 SEC24CP53992 1094 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 RNF4P78317 190 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 MC1RQ01726 317 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 NMIQ13287 307 aaPredicted RBP6.87□□□□□ -1.31
VPS29-210ENST00000552130 ZKSCAN8Q15776 578 aaPredicted RBP6.87□□□□□ -1.31
VPS29-210ENST00000552130 ZNF674Q2M3X9 581 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 MUM1Q2TAK8 710 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 ANKDD1AQ495B1 522 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 MCTP2Q6DN12 878 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 FBXO38Q6PIJ6 1188 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 SLC22A25Q6T423 547 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 BEND5Q7L4P6 421 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 R3HCC1LQ7Z5L2 792 aaKnown RBP6.87□□□□□ -1.31
VPS29-210ENST00000552130 IGDCC3Q8IVU1 814 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 TBC1D21Q8IYX1 336 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 TMCO5AQ8N6Q1 288 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 TP53I13Q8NBR0 393 aaPredicted RBP6.87□□□□□ -1.31
VPS29-210ENST00000552130 ZNF540Q8NDQ6 660 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 BICD2Q8TD16 824 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 MZB1Q8WU39 189 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 AUTS2Q8WXX7 1259 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 COPS5Q92905 334 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 MTFMTQ96DP5 389 aaKnown RBP6.87□□□□□ -1.31
VPS29-210ENST00000552130 RAX2Q96IS3 184 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 NOX5Q96PH1 765 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 ANO3Q9BYT9 981 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 ASCC2Q9H1I8 757 aaPredicted RBP6.87□□□□□ -1.31
VPS29-210ENST00000552130 EPS8L2Q9H6S3 715 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 FANCFQ9NPI8 374 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 MAN2B2Q9Y2E5 1009 aa6.87□□□□□ -1.31
VPS29-210ENST00000552130 SF3B6Q9Y3B4 125 aaKnown RBP6.87□□□□□ -1.31
VPS29-210ENST00000552130 ATAD2BQ9ULI0 1458 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 FAM234BA2RU67 622 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 HMX3A6NHT5 357 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 FAM25EA8MYX2 175 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 ARNTLO00327 626 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 APBB3O95704 486 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 CHGBP05060 677 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 ITGA5P08648 1049 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 KITP10721 976 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 LCP1P13796 627 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 IL4RP24394 825 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 RPL10P27635 214 aaKnown RBP6.86□□□□□ -1.31
VPS29-210ENST00000552130 AOAHP28039 575 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 CST5P28325 142 aaPredicted RBP6.86□□□□□ -1.31
VPS29-210ENST00000552130 ACSL1P33121 698 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 MANFP55145 182 aaKnown RBP6.86□□□□□ -1.31
VPS29-210ENST00000552130 HTRA4P83105 476 aaPredicted RBP6.86□□□□□ -1.31
VPS29-210ENST00000552130 ADCY2Q08462 1091 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 COG2Q14746 738 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 TARBP2Q15633 366 aaKnown RBP6.86□□□□□ -1.31
VPS29-210ENST00000552130 VMACQ2NL98 169 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 FLYWCH1Q4VC44 716 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 HSP90B2PQ58FF3 399 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 THEMIS2Q5TEJ8 643 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 CCDC62Q6P9F0 684 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 SHQ1Q6PI26 577 aaKnown RBP6.86□□□□□ -1.31
VPS29-210ENST00000552130 KDELC1Q6UW63 502 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 RAB11FIP4Q86YS3 637 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 ADGRG2Q8IZP9 1017 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 SYT8Q8NBV8 401 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 CYP2W1Q8TAV3 490 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 THAP4Q8WY91 577 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 IQCDQ96DY2 449 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 ACAT2Q9BWD1 397 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 TRIM5Q9C035 493 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 RABEP2Q9H5N1 569 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 MLXIPQ9HAP2 919 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 SEPSECSQ9HD40 501 aaKnown RBP6.86□□□□□ -1.31
VPS29-210ENST00000552130 GPRC5CQ9NQ84 441 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 INTS10Q9NVR2 710 aaKnown RBP6.86□□□□□ -1.31
VPS29-210ENST00000552130 KLHL14Q9P2G3 628 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 IGSF9Q9P2J2 1179 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 CPNE7Q9UBL6 633 aa6.86□□□□□ -1.31
VPS29-210ENST00000552130 ZC3H12DA2A288 527 aaKnown RBP6.85□□□□□ -1.31
VPS29-210ENST00000552130 ZNF561-AS1K7EIQ3 104 aa6.85□□□□□ -1.31
VPS29-210ENST00000552130 DDX39AO00148 427 aaKnown RBP6.85□□□□□ -1.31
VPS29-210ENST00000552130 ABLIM1O14639 778 aa6.85□□□□□ -1.31
VPS29-210ENST00000552130 CAPN9O14815 690 aa6.85□□□□□ -1.31
VPS29-210ENST00000552130 MUSKO15146 869 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms