RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 KCNJ12Q14500 433 aa20.79■□□□□ 0.92
DDX55-207ENST00000540763 PUS10Q3MIT2 529 aaKnown RBP20.79■□□□□ 0.92
DDX55-207ENST00000540763 LEXMQ3ZCV2 418 aa20.79■□□□□ 0.92
DDX55-207ENST00000540763 TCP11X2Q5H9J9 407 aa20.79■□□□□ 0.92
DDX55-207ENST00000540763 LIN9Q5TKA1 542 aa20.79■□□□□ 0.92
DDX55-207ENST00000540763 CYP26C1Q6V0L0 522 aa20.79■□□□□ 0.92
DDX55-207ENST00000540763 CCDC149Q6ZUS6 474 aa20.79■□□□□ 0.92
DDX55-207ENST00000540763 DCP1BQ8IZD4 617 aaKnown RBP20.79■□□□□ 0.92
DDX55-207ENST00000540763 SMRP1Q8NCR6 262 aa20.79■□□□□ 0.92
DDX55-207ENST00000540763 C2orf15Q8WU43 125 aaKnown RBP20.79■□□□□ 0.92
DDX55-207ENST00000540763 CYP3A43Q9HB55 503 aa20.79■□□□□ 0.92
DDX55-207ENST00000540763 POLIQ9UNA4 740 aa20.79■□□□□ 0.92
DDX55-207ENST00000540763 SMTNL1A8MU46 457 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 CLSTN1O94985 981 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 POU2F2P09086 479 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 BMP1P13497 986 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 KCNA5P22460 613 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 ZNF165P49910 485 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 ITIH3Q06033 890 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 NCAPHQ15003 741 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 INTS6LQ5JSJ4 861 aaKnown RBP20.78■□□□□ 0.92
DDX55-207ENST00000540763 EP400NLQ6ZTU2 488 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 OSTM1Q86WC4 334 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 TCEAL8Q8IYN2 117 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 TTC39CQ8N584 583 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 TUBGCP2Q9BSJ2 902 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 PI4K2AQ9BTU6 479 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 SNX25Q9H3E2 840 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 SMYD3Q9H7B4 428 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 APOBEC3GQ9HC16 384 aaKnown RBP20.78■□□□□ 0.92
DDX55-207ENST00000540763 CD207Q9UJ71 328 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 CDH9Q9ULB4 789 aa20.78■□□□□ 0.92
DDX55-207ENST00000540763 ZMYND10O75800 440 aa20.77■□□□□ 0.92
DDX55-207ENST00000540763 HNRNPA1P09651 372 aaKnown RBP eCLIP20.77■□□□□ 0.92
DDX55-207ENST00000540763 INCA1Q0VD86 236 aa20.77■□□□□ 0.92
DDX55-207ENST00000540763 MAPRE1Q15691 268 aaKnown RBP20.77■□□□□ 0.92
DDX55-207ENST00000540763 NFE2Q16621 373 aaPredicted RBP20.77■□□□□ 0.92
DDX55-207ENST00000540763 SPOPLQ6IQ16 392 aa20.77■□□□□ 0.92
DDX55-207ENST00000540763 SYCE2Q6PIF2 218 aa20.77■□□□□ 0.92
DDX55-207ENST00000540763 AOPEPQ8N6M6 819 aa20.77■□□□□ 0.92
DDX55-207ENST00000540763 LMO3Q8TAP4 145 aa20.77■□□□□ 0.92
DDX55-207ENST00000540763 PKMYT1Q99640 499 aa20.77■□□□□ 0.92
DDX55-207ENST00000540763 MRPL45Q9BRJ2 306 aaKnown RBP20.77■□□□□ 0.92
DDX55-207ENST00000540763 FANCLQ9NW38 375 aa20.77■□□□□ 0.92
DDX55-207ENST00000540763 MTMR11A4FU01 709 aa20.76■□□□□ 0.91
DDX55-207ENST00000540763 ZNF18P17022 549 aa20.76■□□□□ 0.91
DDX55-207ENST00000540763 TBXAS1P24557 533 aaPredicted RBP20.76■□□□□ 0.91
DDX55-207ENST00000540763 ELF1P32519 619 aa20.76■□□□□ 0.91
DDX55-207ENST00000540763 GNL1P36915 607 aaPredicted RBP20.76■□□□□ 0.91
DDX55-207ENST00000540763 KCNQ1P51787 676 aa20.76■□□□□ 0.91
DDX55-207ENST00000540763 ARPP19P56211 112 aa20.76■□□□□ 0.91
DDX55-207ENST00000540763 SMAD4Q13485 552 aaKnown RBP20.76■□□□□ 0.91
DDX55-207ENST00000540763 MIIPQ5JXC2 388 aa20.76■□□□□ 0.91
DDX55-207ENST00000540763 RNF19BQ6ZMZ0 732 aa20.76■□□□□ 0.91
DDX55-207ENST00000540763 UNC93AQ86WB7 457 aa20.76■□□□□ 0.91
DDX55-207ENST00000540763 CREBRFQ8IUR6 639 aa20.76■□□□□ 0.91
DDX55-207ENST00000540763 ANKRD20A12PQ8NF67 263 aa20.76■□□□□ 0.91
DDX55-207ENST00000540763 OR6B3Q8NGW1 331 aa20.76■□□□□ 0.91
DDX55-207ENST00000540763 SPPL2BQ8TCT7 592 aa20.76■□□□□ 0.91
DDX55-207ENST00000540763 NECAB3Q96P71 396 aaPredicted RBP20.76■□□□□ 0.91
DDX55-207ENST00000540763 TMEM209Q96SK2 561 aa20.76■□□□□ 0.91
DDX55-207ENST00000540763 SYT15Q9BQS2 421 aa20.76■□□□□ 0.91
DDX55-207ENST00000540763 S1PR5Q9H228 398 aa20.76■□□□□ 0.91
DDX55-207ENST00000540763 FAM50BQ9Y247 325 aa20.76■□□□□ 0.91
DDX55-207ENST00000540763 SPDYE4A6NLX3 237 aa20.75■□□□□ 0.91
DDX55-207ENST00000540763 H3BQ06 376 aaPredicted RBP20.75■□□□□ 0.91
DDX55-207ENST00000540763 C8AP07357 584 aa20.75■□□□□ 0.91
DDX55-207ENST00000540763 OR4Q2P0C623 313 aa20.75■□□□□ 0.91
DDX55-207ENST00000540763 ADCY1Q08828 1119 aa20.75■□□□□ 0.91
DDX55-207ENST00000540763 VWA3BQ502W6 1294 aa20.75■□□□□ 0.91
DDX55-207ENST00000540763 SLC39A12Q504Y0 691 aa20.75■□□□□ 0.91
DDX55-207ENST00000540763 SMYD5Q6GMV2 418 aa20.75■□□□□ 0.91
DDX55-207ENST00000540763 FAM171BQ6P995 826 aa20.75■□□□□ 0.91
DDX55-207ENST00000540763 SCARA5Q6ZMJ2 495 aa20.75■□□□□ 0.91
DDX55-207ENST00000540763 DHX40Q8IX18 779 aaKnown RBP20.75■□□□□ 0.91
DDX55-207ENST00000540763 FUBP3Q96I24 572 aaKnown RBP eCLIP20.75■□□□□ 0.91
DDX55-207ENST00000540763 NT5C1BQ96P26 610 aa20.75■□□□□ 0.91
DDX55-207ENST00000540763 DNAI2Q9GZS0 605 aa20.75■□□□□ 0.91
DDX55-207ENST00000540763 SDCBP2Q9H190 292 aa20.75■□□□□ 0.91
DDX55-207ENST00000540763 ADAM7Q9H2U9 754 aa20.75■□□□□ 0.91
DDX55-207ENST00000540763 NDST4Q9H3R1 872 aa20.75■□□□□ 0.91
DDX55-207ENST00000540763 ABCB6Q9NP58 842 aa20.75■□□□□ 0.91
DDX55-207ENST00000540763 LRRN2O75325 713 aa20.74■□□□□ 0.91
DDX55-207ENST00000540763 VNN2O95498 520 aa20.74■□□□□ 0.91
DDX55-207ENST00000540763 TPM2P07951 284 aa20.74■□□□□ 0.91
DDX55-207ENST00000540763 SPATA31D3P0C874 917 aa20.74■□□□□ 0.91
DDX55-207ENST00000540763 TRIM21P19474 475 aaKnown RBP20.74■□□□□ 0.91
DDX55-207ENST00000540763 YWHAEP62258 255 aaKnown RBP20.74■□□□□ 0.91
DDX55-207ENST00000540763 IQCB1Q15051 598 aa20.74■□□□□ 0.91
DDX55-207ENST00000540763 HSP90AA4PQ58FG1 418 aa20.74■□□□□ 0.91
DDX55-207ENST00000540763 PPM1LQ5SGD2 360 aa20.74■□□□□ 0.91
DDX55-207ENST00000540763 CES5AQ6NT32 575 aa20.74■□□□□ 0.91
DDX55-207ENST00000540763 GBP6Q6ZN66 633 aa20.74■□□□□ 0.91
DDX55-207ENST00000540763 SPATA31D4Q6ZUB0 917 aa20.74■□□□□ 0.91
DDX55-207ENST00000540763 EHBP1Q8NDI1 1231 aa20.74■□□□□ 0.91
DDX55-207ENST00000540763 SLC7A14Q8TBB6 771 aa20.74■□□□□ 0.91
DDX55-207ENST00000540763 TNIP3Q96KP6 325 aa20.74■□□□□ 0.91
DDX55-207ENST00000540763 HSD3B7Q9H2F3 369 aa20.74■□□□□ 0.91
DDX55-207ENST00000540763 GCNT4Q9P109 453 aa20.74■□□□□ 0.91
DDX55-207ENST00000540763 INSL5Q9Y5Q6 135 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms