RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 TTC26A0AVF1 554 aa16.96■□□□□ 0.31
HDAC6-236ENST00000498808 KHNYNO15037 678 aaKnown RBP16.96■□□□□ 0.31
HDAC6-236ENST00000498808 SLC16A4O15374 487 aa16.96■□□□□ 0.31
HDAC6-236ENST00000498808 HYAL3O43820 417 aaPredicted RBP16.96■□□□□ 0.31
HDAC6-236ENST00000498808 TOM1L1O75674 476 aa16.96■□□□□ 0.31
HDAC6-236ENST00000498808 FBXO43Q4G163 708 aa16.96■□□□□ 0.31
HDAC6-236ENST00000498808 TMEM150AQ86TG1 271 aa16.96■□□□□ 0.31
HDAC6-236ENST00000498808 KIF12Q96FN5 646 aa16.96■□□□□ 0.31
HDAC6-236ENST00000498808 GCNAQ96QF7 691 aa16.96■□□□□ 0.31
HDAC6-236ENST00000498808 P2RY13Q9BPV8 354 aa16.96■□□□□ 0.31
HDAC6-236ENST00000498808 RUSC1Q9BVN2 902 aa16.96■□□□□ 0.31
HDAC6-236ENST00000498808 HAPLN2Q9GZV7 340 aa16.96■□□□□ 0.31
HDAC6-236ENST00000498808 DDX19AQ9NUU7 478 aaKnown RBP16.96■□□□□ 0.31
HDAC6-236ENST00000498808 TBX20Q9UMR3 447 aa16.96■□□□□ 0.31
HDAC6-236ENST00000498808 UBQLN1Q9UMX0 589 aaKnown RBP16.96■□□□□ 0.31
HDAC6-236ENST00000498808 OBSL1O75147 1896 aa16.96■□□□□ 0.31
HDAC6-236ENST00000498808 CYP3A5P20815 502 aa16.95■□□□□ 0.3
HDAC6-236ENST00000498808 NMT1P30419 496 aaKnown RBP16.95■□□□□ 0.3
HDAC6-236ENST00000498808 GJA4P35212 333 aa16.95■□□□□ 0.3
HDAC6-236ENST00000498808 DGKEP52429 567 aa16.95■□□□□ 0.3
HDAC6-236ENST00000498808 IRX4P78413 519 aa16.95■□□□□ 0.3
HDAC6-236ENST00000498808 MCL1Q07820 350 aa16.95■□□□□ 0.3
HDAC6-236ENST00000498808 VEPH1Q14D04 833 aa16.95■□□□□ 0.3
HDAC6-236ENST00000498808 ZNF174Q15697 407 aa16.95■□□□□ 0.3
HDAC6-236ENST00000498808 UAP1L1Q3KQV9 507 aa16.95■□□□□ 0.3
HDAC6-236ENST00000498808 MGAT5BQ3V5L5 792 aa16.95■□□□□ 0.3
HDAC6-236ENST00000498808 ARMCX5Q6P1M9 558 aa16.95■□□□□ 0.3
HDAC6-236ENST00000498808 MAB21L3Q8N8X9 362 aa16.95■□□□□ 0.3
HDAC6-236ENST00000498808 NSUN7Q8NE18 718 aaKnown RBP16.95■□□□□ 0.3
HDAC6-236ENST00000498808 GIPC2Q8TF65 315 aa16.95■□□□□ 0.3
HDAC6-236ENST00000498808 PLEKHA5Q9HAU0 1116 aa16.95■□□□□ 0.3
HDAC6-236ENST00000498808 NEUROG3Q9Y4Z2 214 aa16.95■□□□□ 0.3
HDAC6-236ENST00000498808 DSPP15924 2871 aaKnown RBP16.95■□□□□ 0.3
HDAC6-236ENST00000498808 SFI1A8K8P3 1242 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 E9PMD0 336 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 TAF4O00268 1085 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 JAK2O60674 1132 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 BCKDHBP21953 392 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 AVPR1AP37288 418 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 TNFSF9P41273 254 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 TUFMP49411 452 aaKnown RBP16.94■□□□□ 0.3
HDAC6-236ENST00000498808 AMPD2Q01433 879 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 BFSP1Q12934 665 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 SLC39A12Q504Y0 691 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 CYP2U1Q7Z449 544 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 GTF3C6Q969F1 213 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 ACDQ96AP0 544 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 SENP8Q96LD8 212 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 DRC1Q96MC2 740 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 TPSD1Q9BZJ3 242 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 KIF9Q9HAQ2 790 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 TDP1Q9NUW8 608 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 ZMYM5Q9UJ78 669 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 KLK13Q9UKR3 277 aa16.94■□□□□ 0.3
HDAC6-236ENST00000498808 CLDN3O15551 220 aa16.93■□□□□ 0.3
HDAC6-236ENST00000498808 F11P03951 625 aa16.93■□□□□ 0.3
HDAC6-236ENST00000498808 CLTAP09496 248 aa16.93■□□□□ 0.3
HDAC6-236ENST00000498808 ODC1P11926 461 aa16.93■□□□□ 0.3
HDAC6-236ENST00000498808 FXR2P51116 673 aaKnown RBP eCLIP16.93■□□□□ 0.35e-6■■□□□ 12.9
HDAC6-236ENST00000498808 NLRP12P59046 1061 aa16.93■□□□□ 0.3
HDAC6-236ENST00000498808 LILRA4P59901 499 aa16.93■□□□□ 0.3
HDAC6-236ENST00000498808 ORC2Q13416 577 aaPredicted RBP16.93■□□□□ 0.3
HDAC6-236ENST00000498808 TRIM29Q14134 588 aa16.93■□□□□ 0.3
HDAC6-236ENST00000498808 ME3Q16798 604 aa16.93■□□□□ 0.3
HDAC6-236ENST00000498808 RINT1Q6NUQ1 792 aa16.93■□□□□ 0.3
HDAC6-236ENST00000498808 ZPBP2Q6X784 338 aa16.93■□□□□ 0.3
HDAC6-236ENST00000498808 C1orf186Q6ZWK4 172 aa16.93■□□□□ 0.3
HDAC6-236ENST00000498808 TSTD1Q8NFU3 115 aa16.93■□□□□ 0.3
HDAC6-236ENST00000498808 NTPCRQ9BSD7 190 aaKnown RBP16.93■□□□□ 0.3
HDAC6-236ENST00000498808 ZCWPW1Q9H0M4 648 aa16.93■□□□□ 0.3
HDAC6-236ENST00000498808 C17orf75Q9HAS0 396 aa16.93■□□□□ 0.3
HDAC6-236ENST00000498808 MSRB2Q9Y3D2 182 aa16.93■□□□□ 0.3
HDAC6-236ENST00000498808 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.93■□□□□ 0.3
HDAC6-236ENST00000498808 PTPRDP23468 1912 aa16.93■□□□□ 0.3
HDAC6-236ENST00000498808 LACTBL1A8MY62 500 aa16.92■□□□□ 0.3
HDAC6-236ENST00000498808 HMGA1P17096 107 aaKnown RBP16.92■□□□□ 0.3
HDAC6-236ENST00000498808 GUCY1B3Q02153 619 aa16.92■□□□□ 0.3
HDAC6-236ENST00000498808 PPP2R3AQ06190 1150 aa16.92■□□□□ 0.3
HDAC6-236ENST00000498808 STRN3Q13033 797 aa16.92■□□□□ 0.3
HDAC6-236ENST00000498808 PSMD2Q13200 908 aa16.92■□□□□ 0.3
HDAC6-236ENST00000498808 PDGFRLQ15198 375 aa16.92■□□□□ 0.3
HDAC6-236ENST00000498808 TAF12Q16514 161 aa16.92■□□□□ 0.3
HDAC6-236ENST00000498808 USP39Q53GS9 565 aaKnown RBP16.92■□□□□ 0.3
HDAC6-236ENST00000498808 TXNDC8Q6A555 127 aa16.92■□□□□ 0.3
HDAC6-236ENST00000498808 C11orf74Q86VG3 221 aa16.92■□□□□ 0.3
HDAC6-236ENST00000498808 RASSF3Q86WH2 238 aa16.92■□□□□ 0.3
HDAC6-236ENST00000498808 C4orf32Q8N8J7 132 aa16.92■□□□□ 0.3
HDAC6-236ENST00000498808 TMEM161BQ8NDZ6 487 aa16.92■□□□□ 0.3
HDAC6-236ENST00000498808 SNX29Q8TEQ0 813 aa16.92■□□□□ 0.3
HDAC6-236ENST00000498808 CD101Q93033 1021 aa16.92■□□□□ 0.3
HDAC6-236ENST00000498808 ECT2Q9H8V3 914 aa16.92■□□□□ 0.3
HDAC6-236ENST00000498808 LRWD1Q9UFC0 647 aa16.92■□□□□ 0.3
HDAC6-236ENST00000498808 MYH11P35749 1972 aa16.91■□□□□ 0.3
HDAC6-236ENST00000498808 TNRC6BQ9UPQ9 1833 aaKnown RBP16.91■□□□□ 0.3
HDAC6-236ENST00000498808 SCN1AP35498 2009 aa16.91■□□□□ 0.3
HDAC6-236ENST00000498808 GON4LQ3T8J9 2241 aa16.91■□□□□ 0.3
HDAC6-236ENST00000498808 CYP11A1P05108 521 aa16.91■□□□□ 0.3
HDAC6-236ENST00000498808 MAPTP10636 758 aaKnown RBP16.91■□□□□ 0.3
HDAC6-236ENST00000498808 HAPLN1P10915 354 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-236ENST00000498808 DDX6P26196 483 aaKnown RBP eCLIP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms