RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 GTPBP4Q9BZE4 634 aaKnown RBP12.51□□□□□ -0.41
UBA3-211ENST00000493957 ZCWPW1Q9H0M4 648 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 SMYD3Q9H7B4 428 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 CYP4F11Q9HBI6 524 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 HCFC1R1Q9NWW0 138 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 PATJQ8NI35 1801 aa12.51□□□□□ -0.41
UBA3-211ENST00000493957 MTMR11A4FU01 709 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 GOLGA6L22H0YM25 854 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 NRG2O14511 850 aaPredicted RBP12.5□□□□□ -0.41
UBA3-211ENST00000493957 SLC16A3O15427 465 aaKnown RBP12.5□□□□□ -0.41
UBA3-211ENST00000493957 HUS1O60921 280 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 ATP2C2O75185 946 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 PAPLNO95428 1278 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 C1RP00736 705 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 ATF2P15336 505 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 PAX3P23760 479 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 LMO2P25791 158 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 PIK3CAP42336 1068 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 MCCD1P59942 119 aaPredicted RBP12.5□□□□□ -0.41
UBA3-211ENST00000493957 MYO1EQ12965 1108 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 TRPC3Q13507 836 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 SLC39A12Q504Y0 691 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 DCAF17Q5H9S7 520 aaPredicted RBP12.5□□□□□ -0.41
UBA3-211ENST00000493957 PPM1LQ5SGD2 360 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 CES5AQ6NT32 575 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 ADHFE1Q8IWW8 467 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 TOP6BLQ8N6T0 577 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 ATAD1Q8NBU5 361 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 CMASQ8NFW8 434 aaPredicted RBP12.5□□□□□ -0.41
UBA3-211ENST00000493957 HDAC7Q8WUI4 952 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 SEMA4DQ92854 862 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 RNF25Q96BH1 459 aaPredicted RBP12.5□□□□□ -0.41
UBA3-211ENST00000493957 RPGRIP1Q96KN7 1286 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 LPIN3Q9BQK8 851 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 PRKD2Q9BZL6 878 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 SDCBP2Q9H190 292 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 DDX43Q9NXZ2 648 aaKnown RBP12.5□□□□□ -0.41
UBA3-211ENST00000493957 NXF1Q9UBU9 619 aaKnown RBP12.5□□□□□ -0.41
UBA3-211ENST00000493957 AFF4Q9UHB7 1163 aaKnown RBP12.5□□□□□ -0.41
UBA3-211ENST00000493957 DSEQ9UL01 958 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 SLC27A5Q9Y2P5 690 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 INSL5Q9Y5Q6 135 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 MYO16Q9Y6X6 1858 aa12.5□□□□□ -0.41
UBA3-211ENST00000493957 PRRG1O14668 218 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 GABRDO14764 452 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 IKBKBO14920 756 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 HRO43593 1189 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 CLSTN1O94985 981 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 STAU1O95793 577 aaKnown RBP12.49□□□□□ -0.41
UBA3-211ENST00000493957 PPP1R2P41236 205 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 MTHFRP42898 656 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 CDH8P55286 799 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 PSMC1P62191 440 aaKnown RBP12.49□□□□□ -0.41
UBA3-211ENST00000493957 DUSP4Q13115 394 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 GPR17Q13304 367 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 ZNF699Q32M78 642 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 WDR72Q3MJ13 1102 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 CBWD6Q4V339 395 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 CBWD3Q5JTY5 395 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 CBWD5Q5RIA9 395 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 ATAT1Q5SQI0 421 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 TPGS2Q68CL5 300 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 RBM43Q6ZSC3 357 aaKnown RBP12.49□□□□□ -0.41
UBA3-211ENST00000493957 GRASPQ7Z6J2 395 aaPredicted RBP12.49□□□□□ -0.41
UBA3-211ENST00000493957 TCEAL8Q8IYN2 117 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 SYAP1Q96A49 352 aaPredicted RBP12.49□□□□□ -0.41
UBA3-211ENST00000493957 RIPOR3Q96MK2 946 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 CEP63Q96MT8 703 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 MMS19Q96T76 1030 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 PKMYT1Q99640 499 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 PHF7Q9BWX1 381 aaPredicted RBP12.49□□□□□ -0.41
UBA3-211ENST00000493957 RHOBTB2Q9BYZ6 727 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 APOBEC3GQ9HC16 384 aaKnown RBP12.49□□□□□ -0.41
UBA3-211ENST00000493957 ZDHHC7Q9NXF8 308 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 TMEM63CQ9P1W3 806 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 FAM50BQ9Y247 325 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 R3HCC1Q9Y3T6 440 aaKnown RBP12.49□□□□□ -0.41
UBA3-211ENST00000493957 YIPF1Q9Y548 306 aa12.49□□□□□ -0.41
UBA3-211ENST00000493957 NUP210Q8TEM1 1887 aaPredicted RBP12.48□□□□□ -0.41
UBA3-211ENST00000493957 CLUHO75153 1309 aa12.48□□□□□ -0.41
UBA3-211ENST00000493957 TRIOO75962 3097 aa12.48□□□□□ -0.41
UBA3-211ENST00000493957 BICDL2A1A5D9 508 aa12.48□□□□□ -0.41
UBA3-211ENST00000493957 ARHGEF37A1IGU5 675 aa12.48□□□□□ -0.41
UBA3-211ENST00000493957 C2CD4DB7Z1M9 353 aa12.48□□□□□ -0.41
UBA3-211ENST00000493957 LOC730098B7Z3J9 87 aa12.48□□□□□ -0.41
UBA3-211ENST00000493957 N4BP1O75113 896 aaKnown RBP12.48□□□□□ -0.41
UBA3-211ENST00000493957 ASS1P00966 412 aaKnown RBP12.48□□□□□ -0.41
UBA3-211ENST00000493957 PDGFRBP09619 1106 aa12.48□□□□□ -0.41
UBA3-211ENST00000493957 WARSP23381 471 aaKnown RBP12.48□□□□□ -0.41
UBA3-211ENST00000493957 ELF1P32519 619 aa12.48□□□□□ -0.41
UBA3-211ENST00000493957 AP3M2P53677 418 aa12.48□□□□□ -0.41
UBA3-211ENST00000493957 NLRP12P59046 1061 aa12.48□□□□□ -0.41
UBA3-211ENST00000493957 TNNC1P63316 161 aa12.48□□□□□ -0.41
UBA3-211ENST00000493957 TWF1Q12792 350 aa12.48□□□□□ -0.41
UBA3-211ENST00000493957 CCDC40Q4G0X9 1142 aa12.48□□□□□ -0.41
UBA3-211ENST00000493957 INTS6LQ5JSJ4 861 aaKnown RBP12.48□□□□□ -0.41
UBA3-211ENST00000493957 TCERG1LQ5VWI1 586 aa12.48□□□□□ -0.41
UBA3-211ENST00000493957 FILIP1Q7Z7B0 1213 aa12.48□□□□□ -0.41
UBA3-211ENST00000493957 THEM5Q8N1Q8 247 aa12.48□□□□□ -0.41
UBA3-211ENST00000493957 TMEM86AQ8N2M4 240 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms