RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 C18orf25Q96B23 403 aaPredicted RBP8.32□□□□□ -1.08
PDPN-205ENST00000487038 CNOT6LQ96LI5 555 aaKnown RBP8.32□□□□□ -1.08
PDPN-205ENST00000487038 SEPT5Q99719 369 aaPredicted RBP8.32□□□□□ -1.08
PDPN-205ENST00000487038 ACO2Q99798 780 aaKnown RBP8.32□□□□□ -1.08
PDPN-205ENST00000487038 POLR3CQ9BUI4 534 aaPredicted RBP8.32□□□□□ -1.08
PDPN-205ENST00000487038 TPSD1Q9BZJ3 242 aa8.32□□□□□ -1.08
PDPN-205ENST00000487038 CRISPLD1Q9H336 500 aa8.32□□□□□ -1.08
PDPN-205ENST00000487038 TMEM134Q9H6X4 195 aa8.32□□□□□ -1.08
PDPN-205ENST00000487038 TDP1Q9NUW8 608 aa8.32□□□□□ -1.08
PDPN-205ENST00000487038 UBQLN1Q9UMX0 589 aaKnown RBP8.32□□□□□ -1.08
PDPN-205ENST00000487038 SLC27A5Q9Y2P5 690 aa8.32□□□□□ -1.08
PDPN-205ENST00000487038 PCNX2A6NKB5 2137 aa8.32□□□□□ -1.08
PDPN-205ENST00000487038 PI4KAP42356 2102 aa8.32□□□□□ -1.08
PDPN-205ENST00000487038 PTPRBP23467 1997 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 PCDH15Q96QU1 1955 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 FAM221BA6H8Z2 402 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 UPK3BL1B0FP48 263 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 UPK3BL2E5RIL1 263 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 MEFVO15553 781 aaPredicted RBP8.31□□□□□ -1.08
PDPN-205ENST00000487038 MED24O75448 989 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 REC8O95072 547 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 VNN2O95498 520 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 ENGP17813 658 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 TYMPP19971 482 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 PAX3P23760 479 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 RPA1P27694 616 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 GJA4P35212 333 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 HOXD12P35452 270 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 MATR3P43243 847 aaKnown RBP eCLIP8.31□□□□□ -1.08
PDPN-205ENST00000487038 IFNAR2P48551 515 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 GALK1P51570 392 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 PEX3P56589 373 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 IRX4P78413 519 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 PPP2R3AQ06190 1150 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 SMARCB1Q12824 385 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 STRN3Q13033 797 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 NR1H3Q13133 447 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 NR5A1Q13285 461 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 BYSLQ13895 437 aaKnown RBP8.31□□□□□ -1.08
PDPN-205ENST00000487038 ZNF268Q14587 947 aaPredicted RBP8.31□□□□□ -1.08
PDPN-205ENST00000487038 NOLC1Q14978 699 aaKnown RBP eCLIP8.31□□□□□ -1.08
PDPN-205ENST00000487038 COL28A1Q2UY09 1125 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 SOWAHCQ53LP3 525 aaPredicted RBP8.31□□□□□ -1.08
PDPN-205ENST00000487038 EARS2Q5JPH6 523 aaKnown RBP8.31□□□□□ -1.08
PDPN-205ENST00000487038 ANO7Q6IWH7 933 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 SLC23A3Q6PIS1 610 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 LPCAT2Q7L5N7 544 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 RABEPKQ7Z6M1 372 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 RASSF3Q86WH2 238 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 SYT12Q8IV01 421 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 ABCA7Q8IZY2 2146 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 MRPS31Q92665 395 aaKnown RBP8.31□□□□□ -1.08
PDPN-205ENST00000487038 ATP2A3Q93084 1043 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 DRC1Q96MC2 740 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 MTMR9Q96QG7 549 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 LPIN3Q9BQK8 851 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 SMG9Q9H0W8 520 aaKnown RBP8.31□□□□□ -1.08
PDPN-205ENST00000487038 PTPRHQ9HD43 1115 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 KMT5AQ9NQR1 393 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 TUBGCP4Q9UGJ1 667 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 CIZ1Q9ULV3 898 aaPredicted RBP8.31□□□□□ -1.08
PDPN-205ENST00000487038 RBM19Q9Y4C8 960 aaKnown RBP8.31□□□□□ -1.08
PDPN-205ENST00000487038 TIMM13Q9Y5L4 95 aaPredicted RBP8.31□□□□□ -1.08
PDPN-205ENST00000487038 ZNF462Q96JM2 2506 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 HECTD1Q9ULT8 2610 aa8.31□□□□□ -1.08
PDPN-205ENST00000487038 SPAARA0A1B0GVQ0 90 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 FAM205CA6NFA0 338 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 TNFRSF10BO14763 440 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 MAP3K13O43283 966 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 OPHN1O60890 802 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 SOAT2O75908 522 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 LARGE1O95461 756 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 ATF6P18850 670 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 CYP3A5P20815 502 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 PROZP22891 400 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 LRPAP1P30533 357 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 AARSP49588 968 aaKnown RBP eCLIP8.3□□□□□ -1.08
PDPN-205ENST00000487038 SEMA3BQ13214 749 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 TRIM29Q14134 588 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 MTF1Q14872 753 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 SLC39A12Q504Y0 691 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 SPDYCQ5MJ68 293 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 C19orf48Q6RUI8 117 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 MAB21L3Q8N8X9 362 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 ATAD1Q8NBU5 361 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 CEP76Q8TAP6 659 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 SPPL2BQ8TCT7 592 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 WHAMMQ8TF30 809 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 CHFRQ96EP1 664 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 TARS2Q9BW92 718 aaKnown RBP8.3□□□□□ -1.08
PDPN-205ENST00000487038 SLC46A2Q9BY10 475 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 CCDC86Q9H6F5 360 aaKnown RBP8.3□□□□□ -1.08
PDPN-205ENST00000487038 ECT2Q9H8V3 914 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 C17orf75Q9HAS0 396 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 PLEKHA5Q9HAU0 1116 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 IL21Q9HBE4 155 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 ZSWIM6Q9HCJ5 1215 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 POLR3BQ9NW08 1133 aaPredicted RBP8.3□□□□□ -1.08
PDPN-205ENST00000487038 DUS2Q9NX74 493 aaKnown RBP8.3□□□□□ -1.08
PDPN-205ENST00000487038 KCNG1Q9UIX4 513 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms