RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 RESTQ13127 1097 aa22.37■■□□□ 1.17
CPNE1-219ENST00000440240 ALCAMQ13740 583 aa22.37■■□□□ 1.17
CPNE1-219ENST00000440240 LRRC32Q14392 662 aa22.37■■□□□ 1.17
CPNE1-219ENST00000440240 LRRTM3Q86VH5 581 aa22.37■■□□□ 1.17
CPNE1-219ENST00000440240 RALGPS2Q86X27 583 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-219ENST00000440240 GPIHBP1Q8IV16 184 aa22.37■■□□□ 1.17
CPNE1-219ENST00000440240 SYCP3Q8IZU3 236 aa22.37■■□□□ 1.17
CPNE1-219ENST00000440240 LPIN3Q9BQK8 851 aa22.37■■□□□ 1.17
CPNE1-219ENST00000440240 THG1LQ9NWX6 298 aaKnown RBP22.37■■□□□ 1.17
CPNE1-219ENST00000440240 TBC1D7Q9P0N9 293 aa22.37■■□□□ 1.17
CPNE1-219ENST00000440240 SMG5Q9UPR3 1016 aaKnown RBP22.37■■□□□ 1.17
CPNE1-219ENST00000440240 MORC2Q9Y6X9 1032 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-219ENST00000440240 MYBPHLA2RUH7 354 aa22.36■■□□□ 1.17
CPNE1-219ENST00000440240 SLC38A8A6NNN8 435 aa22.36■■□□□ 1.17
CPNE1-219ENST00000440240 HAPLN1P10915 354 aaPredicted RBP22.36■■□□□ 1.17
CPNE1-219ENST00000440240 IDEP14735 1019 aa22.36■■□□□ 1.17
CPNE1-219ENST00000440240 GARTP22102 1010 aa22.36■■□□□ 1.17
CPNE1-219ENST00000440240 TFAMQ00059 246 aaKnown RBP22.36■■□□□ 1.17
CPNE1-219ENST00000440240 TSPY1Q01534 308 aa22.36■■□□□ 1.17
CPNE1-219ENST00000440240 DGLUCYQ7Z3D6 616 aa22.36■■□□□ 1.17
CPNE1-219ENST00000440240 SPEM1Q8N4L4 309 aa22.36■■□□□ 1.17
CPNE1-219ENST00000440240 BPIFB1Q8TDL5 484 aa22.36■■□□□ 1.17
CPNE1-219ENST00000440240 LRRC3BQ96PB8 259 aa22.36■■□□□ 1.17
CPNE1-219ENST00000440240 IL21Q9HBE4 155 aa22.36■■□□□ 1.17
CPNE1-219ENST00000440240 ABI2Q9NYB9 513 aaPredicted RBP22.36■■□□□ 1.17
CPNE1-219ENST00000440240 PCDHB5Q9Y5E4 795 aa22.36■■□□□ 1.17
CPNE1-219ENST00000440240 SCN1AP35498 2009 aa22.36■■□□□ 1.17
CPNE1-219ENST00000440240 SPECC1L-ADORA2AF8WAN1 911 aa22.35■■□□□ 1.17
CPNE1-219ENST00000440240 TULP1O00294 542 aaPredicted RBP22.35■■□□□ 1.17
CPNE1-219ENST00000440240 TDGF1P13385 188 aa22.35■■□□□ 1.17
CPNE1-219ENST00000440240 STAT6P42226 847 aa22.35■■□□□ 1.17
CPNE1-219ENST00000440240 SLC39A14Q15043 492 aa22.35■■□□□ 1.17
CPNE1-219ENST00000440240 NFE2Q16621 373 aaPredicted RBP22.35■■□□□ 1.17
CPNE1-219ENST00000440240 DGKKQ5KSL6 1271 aa22.35■■□□□ 1.17
CPNE1-219ENST00000440240 FAM173BQ6P4H8 233 aa22.35■■□□□ 1.17
CPNE1-219ENST00000440240 BRSK2Q8IWQ3 736 aa22.35■■□□□ 1.17
CPNE1-219ENST00000440240 CELF5Q8N6W0 485 aaKnown RBP22.35■■□□□ 1.17
CPNE1-219ENST00000440240 GIPC2Q8TF65 315 aa22.35■■□□□ 1.17
CPNE1-219ENST00000440240 INTS4Q96HW7 963 aaKnown RBP22.35■■□□□ 1.17
CPNE1-219ENST00000440240 TMEM206Q9H813 350 aa22.35■■□□□ 1.17
CPNE1-219ENST00000440240 TICRRQ7Z2Z1 1910 aa22.35■■□□□ 1.17
CPNE1-219ENST00000440240 HUS1O60921 280 aa22.34■■□□□ 1.17
CPNE1-219ENST00000440240 SDHBP21912 280 aa22.34■■□□□ 1.17
CPNE1-219ENST00000440240 CTHP32929 405 aa22.34■■□□□ 1.17
CPNE1-219ENST00000440240 CDR1P51861 262 aa22.34■■□□□ 1.17
CPNE1-219ENST00000440240 CYP4F8P98187 520 aa22.34■■□□□ 1.17
CPNE1-219ENST00000440240 SAAL1Q96ER3 474 aa22.34■■□□□ 1.17
CPNE1-219ENST00000440240 SLC46A2Q9BY10 475 aa22.34■■□□□ 1.17
CPNE1-219ENST00000440240 PANK2Q9BZ23 570 aa22.34■■□□□ 1.17
CPNE1-219ENST00000440240 ZSCAN16Q9H4T2 348 aaPredicted RBP22.34■■□□□ 1.17
CPNE1-219ENST00000440240 PANK4Q9NVE7 773 aa22.34■■□□□ 1.17
CPNE1-219ENST00000440240 DLL3Q9NYJ7 618 aa22.34■■□□□ 1.17
CPNE1-219ENST00000440240 RBAKQ9NYW8 714 aaPredicted RBP22.34■■□□□ 1.17
CPNE1-219ENST00000440240 GTSE1Q9NYZ3 720 aa22.34■■□□□ 1.17
CPNE1-219ENST00000440240 RAB23Q9ULC3 237 aa22.34■■□□□ 1.17
CPNE1-219ENST00000440240 AGAP1Q9UPQ3 857 aa22.34■■□□□ 1.17
CPNE1-219ENST00000440240 FRMD3A2A2Y4 597 aa22.33■■□□□ 1.17
CPNE1-219ENST00000440240 ITGB3P05106 788 aa22.33■■□□□ 1.17
CPNE1-219ENST00000440240 POLR2BP30876 1174 aaKnown RBP22.33■■□□□ 1.17
CPNE1-219ENST00000440240 SOX9P48436 509 aa22.33■■□□□ 1.17
CPNE1-219ENST00000440240 CMTM8Q8IZV2 173 aa22.33■■□□□ 1.17
CPNE1-219ENST00000440240 TMEM86AQ8N2M4 240 aa22.33■■□□□ 1.17
CPNE1-219ENST00000440240 SYNPOQ8N3V7 929 aa22.33■■□□□ 1.17
CPNE1-219ENST00000440240 CSGALNACT2Q8N6G5 542 aa22.33■■□□□ 1.17
CPNE1-219ENST00000440240 LRRC52Q8N7C0 313 aa22.33■■□□□ 1.17
CPNE1-219ENST00000440240 ZFYVE19Q96K21 471 aa22.33■■□□□ 1.17
CPNE1-219ENST00000440240 ACBD6Q9BR61 282 aa22.33■■□□□ 1.17
CPNE1-219ENST00000440240 GMEB2Q9UKD1 530 aa22.33■■□□□ 1.17
CPNE1-219ENST00000440240 ITGA11Q9UKX5 1188 aa22.33■■□□□ 1.17
CPNE1-219ENST00000440240 COL4A2P08572 1712 aa22.33■■□□□ 1.17
CPNE1-219ENST00000440240 DNAH14Q0VDD8 3507 aa22.32■■□□□ 1.16
CPNE1-219ENST00000440240 SOBPA7XYQ1 873 aa22.32■■□□□ 1.16
CPNE1-219ENST00000440240 EXTL3O43909 919 aa22.32■■□□□ 1.16
CPNE1-219ENST00000440240 PRPF40AO75400 957 aaKnown RBP22.32■■□□□ 1.16
CPNE1-219ENST00000440240 PRAMEF12O95522 483 aa22.32■■□□□ 1.16
CPNE1-219ENST00000440240 DDX6P26196 483 aaKnown RBP eCLIP22.32■■□□□ 1.169e-13■■■■□ 25.3
CPNE1-219ENST00000440240 AVPR1AP37288 418 aa22.32■■□□□ 1.16
CPNE1-219ENST00000440240 CASP5P51878 434 aa22.32■■□□□ 1.16
CPNE1-219ENST00000440240 SATB1Q01826 763 aa22.32■■□□□ 1.16
CPNE1-219ENST00000440240 GAS6Q14393 721 aa22.32■■□□□ 1.16
CPNE1-219ENST00000440240 PDCL2Q8N4E4 241 aa22.32■■□□□ 1.16
CPNE1-219ENST00000440240 C1orf127Q8N9H9 656 aa22.32■■□□□ 1.16
CPNE1-219ENST00000440240 USP28Q96RU2 1077 aa22.32■■□□□ 1.16
CPNE1-219ENST00000440240 LRRC27Q9C0I9 530 aa22.32■■□□□ 1.16
CPNE1-219ENST00000440240 R3HCC1Q9Y3T6 440 aaKnown RBP22.32■■□□□ 1.16
CPNE1-219ENST00000440240 ANK1P16157 1881 aa22.32■■□□□ 1.16
CPNE1-219ENST00000440240 KIAA0391O15091 583 aaKnown RBP22.31■■□□□ 1.16
CPNE1-219ENST00000440240 PAPSS2O95340 614 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-219ENST00000440240 F11P03951 625 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 CSH1P0DML2 217 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 CSH2P0DML3 217 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 HMGA1P17096 107 aaKnown RBP22.31■■□□□ 1.16
CPNE1-219ENST00000440240 CNR2P34972 360 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 NLRP12P59046 1061 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 RBP5P82980 135 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 MYL7Q01449 175 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 RSPO4Q2I0M5 234 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-219ENST00000440240 ITPRIPL2Q3MIP1 535 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 TXNDC11Q6PKC3 985 aa22.31■■□□□ 1.16
CPNE1-219ENST00000440240 STXBP4Q6ZWJ1 553 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms