RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 INPPL1O15357 1258 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 MGEA5O60502 916 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 LRRN2O75325 713 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 GFPT2O94808 682 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 EOMESO95936 686 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 AKAP5P24588 427 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 NUBP1P53384 320 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 RBP5P82980 135 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 ZNF699Q32M78 642 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 HGSNATQ68CP4 663 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 LLGL2Q6P1M3 1020 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 SLC24A5Q71RS6 500 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 IRF2BP2Q7Z5L9 587 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 FAM71AQ8IYT1 594 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 CMTR2Q8IYT2 770 aaKnown RBP12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 LRRC52Q8N7C0 313 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 RSPH1Q8WYR4 309 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 TATDN2Q93075 761 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 FAM84AQ96KN4 292 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 KREMEN1Q96MU8 473 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 PI4K2AQ9BTU6 479 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 APOL6Q9BWW8 343 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 SLC38A7Q9NVC3 462 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 DPP3Q9NY33 737 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 ARHGAP20Q9P2F6 1191 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 R3HCC1Q9Y3T6 440 aaKnown RBP12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 VPS13AQ96RL7 3174 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 C9IYK1 514 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 ZNF500O60304 480 aaPredicted RBP12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 LCA5LO95447 670 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 CST3P01034 146 aaPredicted RBP12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 ITGB3P05106 788 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 P4HA1P13674 534 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 PNPLA4P41247 253 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 MYL6P60660 151 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 YWHAEP62258 255 aaKnown RBP12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 FAM189BP81408 668 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 KLHL30Q0D2K2 578 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 MYO1EQ12965 1108 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 CUL2Q13617 745 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 ARHGAP44Q17R89 818 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 TDRD12Q587J7 1177 aaKnown RBP12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 RAD9BQ6WBX8 426 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 AGMOQ6ZNB7 445 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 ZNF598Q86UK7 904 aaKnown RBP12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 RTN4RL1Q86UN2 441 aaPredicted RBP12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 ECHDC2Q86YB7 292 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 RMDN1Q96DB5 314 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 CCDC42Q96M95 316 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 ZNF560Q96MR9 790 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 ZMAT2Q96NC0 199 aaKnown RBP12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 RPS6KC1Q96S38 1066 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 CHP1Q99653 195 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 S1PR5Q9H228 398 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 ELAC1Q9H777 363 aaKnown RBP12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 NHEJ1Q9H9Q4 299 aaPredicted RBP12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 APOBEC3GQ9HC16 384 aaKnown RBP12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 CNTN6Q9UQ52 1028 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 NUB1Q9Y5A7 615 aa12.54□□□□□ -0.4
AC009404.1-202ENST00000439955 TRIP11Q15643 1979 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 ANO9A1A5B4 782 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 EIF3CLB5ME19 914 aaKnown RBP12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 FOXN3O00409 490 aaPredicted RBP12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 PTGESO14684 152 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 ZSCAN12O43309 604 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 NDUFA10O95299 355 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 IPO7O95373 1038 aaKnown RBP12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 KRT19P08727 400 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 CCDC175P0C221 793 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 LRPAP1P30533 357 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 POLR2BP30876 1174 aaKnown RBP12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 BPIFB4P59827 614 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 ERVFC1P60507 584 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 KRT83P78385 493 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 MTMR3Q13615 1198 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 DUSP6Q16828 381 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 ASTE1Q2TB18 679 aaPredicted RBP12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 ZNF667Q5HYK9 610 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 SPOUT1Q5T280 376 aaKnown RBP12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 ASTLQ6HA08 431 aaPredicted RBP12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 VPS36Q86VN1 386 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 TTC39CQ8N584 583 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 UBR7Q8N806 425 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 PPP1R10Q96QC0 940 aaKnown RBP12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 EIF3CQ99613 913 aaKnown RBP12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 MFSD1Q9H3U5 465 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 DEF6Q9H4E7 631 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 RSAD1Q9HA92 442 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 CYP3A43Q9HB55 503 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 HCSTQ9UBK5 93 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 EPN1Q9Y6I3 576 aaPredicted RBP12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 ATP8B3O60423 1300 aa12.53□□□□□ -0.4
AC009404.1-202ENST00000439955 GOLGA6L9A6NEM1 432 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 ARL5CA6NH57 179 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 PIRO00625 290 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 THP07101 528 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 ASGR2P07307 311 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 PAX3P23760 479 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 EIF4A3P38919 411 aaKnown RBP12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 ASPAP45381 313 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms