RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PHKG2P15735 406 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 ANXA11P50995 505 aaKnown RBP4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 RPS7P62081 194 aaKnown RBP4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 GUCY1B3Q02153 619 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 DPTQ07507 201 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 PTPAQ15257 358 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 SAFBQ15424 915 aaKnown RBP eCLIP4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 AMOTQ4VCS5 1084 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 SLC44A4Q53GD3 710 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 LMBRD2Q68DH5 695 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 GPR149Q86SP6 731 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 COL23A1Q86Y22 540 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 KRT78Q8N1N4 520 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 APIPQ96GX9 242 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 MOGAT1Q96PD6 335 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 BTBD1Q9H0C5 482 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 NUP62CLQ9H1M0 184 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 SYBUQ9NX95 663 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 ETAA1Q9NY74 926 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 CTTNBP2NLQ9P2B4 639 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 TOR1BO14657 336 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 TBX3O15119 743 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 FOXN1O15353 648 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 SUN1O94901 812 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 BRAFP15056 766 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 VAV2P52735 878 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 RAB32Q13637 225 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 MAP9Q49MG5 647 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 PREPLQ4J6C6 727 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 COBLL1Q53SF7 1204 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 SP5Q6BEB4 398 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 LAIR1Q6GTX8 287 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 KSR2Q6VAB6 950 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 C11orf96Q7Z7L8 435 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 PSD4Q8NDX1 1056 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 NSUN7Q8NE18 718 aaKnown RBP4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 FAM46DQ8NEK8 389 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 PJA1Q8NG27 643 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 POC1BQ8TC44 478 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 HEPHQ9BQS7 1158 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 SPATA5L1Q9BVQ7 753 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 IKZF4Q9H2S9 585 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 ZNF287Q9HBT7 754 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 ARNT2Q9HBZ2 717 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 KIAA1586Q9HCI6 787 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 MRPS18AQ9NVS2 196 aaKnown RBP4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 HESX1Q9UBX0 185 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 OGDHLQ9ULD0 1010 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 PCDHGB6Q9Y5F9 930 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 USP19O94966 1318 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 SPATA31A3Q5VYP0 1347 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 TRGV11A0A075B6L2 103 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 ANO9A1A5B4 782 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 MYO1CO00159 1063 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 FOXN3O00409 490 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 BTN3A1O00481 513 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 PLIN1O60240 522 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 TBC1D4O60343 1298 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 FDXRP22570 491 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 PROZP22891 400 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 VIPR2P41587 438 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 BLOC1S1P78537 153 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 SLC13A2Q13183 592 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 DYRK1AQ13627 763 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 HLXQ14774 488 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 CNGA2Q16280 664 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 GEN1Q17RS7 908 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 Q6YL49 198 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 TMPRSS9Q7Z410 1059 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 SNX19Q92543 992 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 TMEM125Q96AQ2 219 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 PRRX2Q99811 253 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 TTPALQ9BTX7 342 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 ZNF518BQ9C0D4 1074 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 UNKLQ9H9P5 680 aaKnown RBP4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 AFF4Q9UHB7 1163 aaKnown RBP4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 FAM50BQ9Y247 325 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 TMX2Q9Y320 296 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 RAD54BQ9Y620 910 aa4.54□□□□□ -1.68
TRAPPC13-204ENST00000438419 A0A087WWL8 130 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 PQBP1O60828 265 aaKnown RBP4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 VPS4BO75351 444 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 PEX14O75381 377 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 NBPF7P0C2Y1 421 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 ATXN1LP0C7T5 689 aaKnown RBP4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 CYP2C9P11712 490 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 XRCC6P12956 609 aaKnown RBP eCLIP4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 ITGALP20701 1170 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 SLC11A2P49281 568 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 SUMO3P55854 103 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 WNT3P56703 355 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 MC2RQ01718 297 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 SATB1Q01826 763 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 FPGSQ05932 587 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 LONRF3Q496Y0 759 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 ABHD17BQ5VST6 288 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 TAF2Q6P1X5 1199 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 SLC30A10Q6XR72 485 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms