RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 TMEM60Q9H2L4 133 aa4.95□□□□□ -1.62
SF3B1-202ENST00000409915 UBN1Q9NPG3 1134 aa4.95□□□□□ -1.62
SF3B1-202ENST00000409915 BRD7Q9NPI1 651 aa4.95□□□□□ -1.62
SF3B1-202ENST00000409915 DMRT3Q9NQL9 472 aa4.95□□□□□ -1.62
SF3B1-202ENST00000409915 PAK6Q9NQU5 681 aaPredicted RBP4.95□□□□□ -1.62
SF3B1-202ENST00000409915 NFKBIL1Q9UBC1 381 aaPredicted RBP4.95□□□□□ -1.62
SF3B1-202ENST00000409915 SEC63Q9UGP8 760 aaKnown RBP4.95□□□□□ -1.62
SF3B1-202ENST00000409915 TMEM98Q9Y2Y6 226 aa4.95□□□□□ -1.62
SF3B1-202ENST00000409915 RPTORQ8N122 1335 aa4.95□□□□□ -1.62
SF3B1-202ENST00000409915 SYNRGQ9UMZ2 1314 aa4.95□□□□□ -1.62
SF3B1-202ENST00000409915 NID2Q14112 1375 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 RBBP6Q7Z6E9 1792 aaKnown RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 MYADML2A6NDP7 307 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 SPATA31C2B4DYI2 1134 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 PDE2AO00408 941 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 GFRA2O00451 464 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 NOP56O00567 594 aaKnown RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 ADAMTS3O15072 1205 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 KPNA5O15131 536 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 CCP110O43303 1012 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 NCK2O43639 380 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 FARP2O94887 1054 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 SLITRK5O94991 958 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 TFRCP02786 760 aaKnown RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 CSTBP04080 98 aaKnown RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 CYP11A1P05108 521 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 GJB1P08034 283 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 TPM1P09493 284 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 DHRS4L1P0CG22 281 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 ZNF865P0CJ78 1059 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 H2AFXP16104 143 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 ATP2A2P16615 1042 aaKnown RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 EIF2AK2P19525 551 aaKnown RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 ABCD1P33897 745 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 PIK3CBP42338 1070 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 GNAQP50148 359 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 MAPK10P53779 464 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 NAPAP54920 295 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 TPM4P67936 248 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 ST3GAL1Q11201 340 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 SCRN1Q12765 414 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 GPS2Q13227 327 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 PSMD6Q15008 389 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 ME3Q16798 604 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 RILPL1Q5EBL4 403 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 RNF220Q5VTB9 566 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 SCARA3Q6AZY7 606 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 ZNF449Q6P9G9 518 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 USP17L6PQ6QN14 398 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 ENOSF1Q7L5Y1 443 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 ADAT2Q7Z6V5 191 aaKnown RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 RBM12BQ8IXT5 1001 aaKnown RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 C10orf67Q8IYJ2 551 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 KRT78Q8N1N4 520 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 ESX1Q8N693 406 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 NECAB1Q8N987 351 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 IGSF22Q8N9C0 903 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 DRAXINQ8NBI3 349 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 PCYOX1LQ8NBM8 494 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 BVESQ8NE79 360 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 APPL2Q8NEU8 664 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 IL31RAQ8NI17 732 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 SYTL5Q8TDW5 730 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 AFAP1L1Q8TED9 768 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 KCTD13Q8WZ19 329 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 CENPIQ92674 756 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 EXOC4Q96A65 974 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 SH3KBP1Q96B97 665 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 VMP1Q96GC9 406 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 TMEM169Q96HH4 297 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 PGBD1Q96JS3 809 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 ZSCAN31Q96LW9 406 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 SLC6A18Q96N87 628 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 TAAR1Q96RJ0 339 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 SH3GL3Q99963 347 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 LZTS2Q9BRK4 669 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 LSM14BQ9BX40 385 aaKnown RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 B3GNT5Q9BYG0 378 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 KATNBL1Q9H079 304 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 KLHL25Q9H0H3 589 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 CLEC4MQ9H2X3 399 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 ZSCAN16Q9H4T2 348 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 RUBCNLQ9H714 662 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 PDGFCQ9NRA1 345 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 GIMAP2Q9UG22 337 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 SUN2Q9UH99 717 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 HCN2Q9UL51 889 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 CNPY2Q9Y2B0 182 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 MRPL11Q9Y3B7 192 aaKnown RBP4.94□□□□□ -1.62
SF3B1-202ENST00000409915 DYRK1BQ9Y463 629 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 MCM3APO60318 1980 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 SYNGAP1Q96PV0 1343 aa4.94□□□□□ -1.62
SF3B1-202ENST00000409915 MYH6P13533 1939 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 ZNFX1Q9P2E3 1918 aaKnown RBP4.93□□□□□ -1.62
SF3B1-202ENST00000409915 FRMPD3Q5JV73 1810 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 TRIM64A6NGJ6 449 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 ERICH4A6NGS2 130 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 TRIM64BA6NI03 449 aa4.93□□□□□ -1.62
SF3B1-202ENST00000409915 GCOM1H8Y6P7 765 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms