RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 THAP12O43422 761 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 CYP11A1P05108 521 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 PAEPP09466 180 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 FAM163BP0C2L3 166 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 BRD2P25440 801 aaKnown RBP11.66□□□□□ -0.54
BRCC3-204ENST00000369462 SSTR3P32745 418 aaPredicted RBP11.66□□□□□ -0.54
BRCC3-204ENST00000369462 LHX1P48742 406 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 OVOS1Q6IE37 1185 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 C12orf29Q8N999 325 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 COLGALT1Q8NBJ5 622 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 ZNF606Q8WXB4 792 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 TFAP2BQ92481 460 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 DDX1Q92499 740 aaKnown RBP11.66□□□□□ -0.54
BRCC3-204ENST00000369462 AGPAT1Q99943 283 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 SPTLC3Q9NUV7 552 aa11.66□□□□□ -0.54
BRCC3-204ENST00000369462 EPN1Q9Y6I3 576 aaPredicted RBP11.66□□□□□ -0.54
BRCC3-204ENST00000369462 FAM170AA1A519 330 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 MMEP08473 750 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 TNFAIP3P21580 790 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 CDR1P51861 262 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 KIF11P52732 1056 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 CDR2Q01850 454 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 YWHAHQ04917 246 aaPredicted RBP11.65□□□□□ -0.54
BRCC3-204ENST00000369462 ASTE1Q2TB18 679 aaPredicted RBP11.65□□□□□ -0.54
BRCC3-204ENST00000369462 VPS36Q86VN1 386 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 CCDC170Q8IYT3 715 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 TMEM169Q96HH4 297 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 LPIN3Q9BQK8 851 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 ZSWIM1Q9BR11 485 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 PYCARDQ9ULZ3 195 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 CHD7Q9P2D1 2997 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 A0A087X0T9 212 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 ATP2C2O75185 946 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 NDUFA10O95299 355 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 FAM228BP0C875 321 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 MYOGP15173 224 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 CHRNB2P17787 502 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 TYMPP19971 482 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 CYLC1P35663 651 aaPredicted RBP11.65□□□□□ -0.54
BRCC3-204ENST00000369462 PSMC1P62191 440 aaKnown RBP11.65□□□□□ -0.54
BRCC3-204ENST00000369462 GFPT1Q06210 699 aaPredicted RBP11.65□□□□□ -0.54
BRCC3-204ENST00000369462 ELAVL2Q12926 359 aaKnown RBP11.65□□□□□ -0.54
BRCC3-204ENST00000369462 TAS1R1Q7RTX1 841 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 SLC39A11Q8N1S5 342 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 TNIP3Q96KP6 325 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 DESI2Q9BSY9 194 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 SYT11Q9BT88 431 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 PDCL3Q9H2J4 239 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 AAASQ9NRG9 546 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 SPG21Q9NZD8 308 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 PCDHB12Q9Y5F1 795 aa11.65□□□□□ -0.54
BRCC3-204ENST00000369462 DDX3XO00571 662 aaKnown RBP eCLIP11.64□□□□□ -0.553e-7■■■■□ 19.9
BRCC3-204ENST00000369462 SYN3O14994 580 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 CAPN15O75808 1086 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 CFHP08603 1231 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 FMO1Q01740 532 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 CYP27A1Q02318 531 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 BMS1Q14692 1282 aaKnown RBP11.64□□□□□ -0.55
BRCC3-204ENST00000369462 SMYD5Q6GMV2 418 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 TOGARAM2Q6ZUX3 1019 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 PALB2Q86YC2 1186 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 CRYBG2Q8N1P7 616 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 B3GALNT2Q8NCR0 500 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 SP7Q8TDD2 431 aaPredicted RBP11.64□□□□□ -0.55
BRCC3-204ENST00000369462 CLP1Q92989 425 aaKnown RBP11.64□□□□□ -0.55
BRCC3-204ENST00000369462 FAM49BQ9NUQ9 324 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 CHD9Q3L8U1 2897 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 LINC00271P0C7V0 271 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 VDRP11473 427 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 PCSK1P29120 753 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 SLC18A3Q16572 532 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 CCDC142Q17RM4 750 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 SGO2Q562F6 1265 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 VARS2Q5ST30 1063 aaKnown RBP11.64□□□□□ -0.55
BRCC3-204ENST00000369462 KIAA0319Q5VV43 1072 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 ZNF677Q86XU0 584 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 THEM5Q8N1Q8 247 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 OLIG1Q8TAK6 271 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 LNX1Q8TBB1 728 aaPredicted RBP11.64□□□□□ -0.55
BRCC3-204ENST00000369462 RTP3Q9BQQ7 232 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 KIAA1257Q9ULG3 409 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 ZNF263O14978 683 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 OAZ2O95190 189 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 PTPN1P18031 435 aaKnown RBP11.64□□□□□ -0.55
BRCC3-204ENST00000369462 FGFR3P22607 806 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 PPM1AP35813 382 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 RTP2Q5QGT7 225 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 PASD1Q8IV76 773 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 ACRBPQ8NEB7 543 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 SPATA18Q8TC71 538 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 PCDHB18PQ96TA0 734 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 SYT15Q9BQS2 421 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 ACBD6Q9BR61 282 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 TTPALQ9BTX7 342 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 VN1R3Q9BXE9 311 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 DNAI2Q9GZS0 605 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 GTF3C4Q9UKN8 822 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 CDH23Q9H251 3354 aa11.64□□□□□ -0.55
BRCC3-204ENST00000369462 CARNS1A5YM72 827 aa11.63□□□□□ -0.55
BRCC3-204ENST00000369462 TMCO5BA8MYB1 307 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms