RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 MYO1AQ9UBC5 1043 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 SALL4Q9UJQ4 1053 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 BARX2Q9UMQ3 279 aaPredicted RBP15.65■□□□□ 0.1
CXCL12-201ENST00000343575 PJA2O43164 708 aa15.64■□□□□ 0.09
CXCL12-201ENST00000343575 HCRTO43612 131 aa15.64■□□□□ 0.09
CXCL12-201ENST00000343575 ITGB1P05556 798 aa15.64■□□□□ 0.09
CXCL12-201ENST00000343575 P4HA1P13674 534 aa15.64■□□□□ 0.09
CXCL12-201ENST00000343575 GNA15P30679 374 aa15.64■□□□□ 0.09
CXCL12-201ENST00000343575 RPL9P32969 192 aaKnown RBP15.64■□□□□ 0.09
CXCL12-201ENST00000343575 AARSP49588 968 aaKnown RBP eCLIP15.64■□□□□ 0.09
CXCL12-201ENST00000343575 NDST1P52848 882 aa15.64■□□□□ 0.09
CXCL12-201ENST00000343575 CCDC122Q5T0U0 273 aa15.64■□□□□ 0.09
CXCL12-201ENST00000343575 MFSD5Q6N075 450 aa15.64■□□□□ 0.09
CXCL12-201ENST00000343575 CNKSR3Q6P9H4 555 aa15.64■□□□□ 0.09
CXCL12-201ENST00000343575 ZNF560Q96MR9 790 aa15.64■□□□□ 0.09
CXCL12-201ENST00000343575 L1RE1Q9UN81 338 aa15.64■□□□□ 0.09
CXCL12-201ENST00000343575 PCDHB7Q9Y5E2 793 aa15.64■□□□□ 0.09
CXCL12-201ENST00000343575 LTBP2Q14767 1821 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 MYO1CO00159 1063 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 BRD2P25440 801 aaKnown RBP15.63■□□□□ 0.09
CXCL12-201ENST00000343575 SSTR3P32745 418 aaPredicted RBP15.63■□□□□ 0.09
CXCL12-201ENST00000343575 RFC2P35250 354 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 BPIFB4P59827 614 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 COLGALT2Q8IYK4 626 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 ISCUQ9H1K1 167 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 FAM124BQ9H5Z6 455 aaPredicted RBP15.63■□□□□ 0.09
CXCL12-201ENST00000343575 HCSTQ9UBK5 93 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 COL4A6Q14031 1691 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 TACC1O75410 805 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 CYP1A1P04798 512 aaPredicted RBP15.63■□□□□ 0.09
CXCL12-201ENST00000343575 UNGP13051 313 aaPredicted RBP15.63■□□□□ 0.09
CXCL12-201ENST00000343575 RAG1P15918 1043 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 LMAN1P49257 510 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 YWHAEP62258 255 aaKnown RBP15.63■□□□□ 0.09
CXCL12-201ENST00000343575 WHAMMP3Q1A5X7 153 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 SV2CQ496J9 727 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 TIGD5Q53EQ6 642 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 BEND6Q5SZJ8 279 aaPredicted RBP15.63■□□□□ 0.09
CXCL12-201ENST00000343575 C16orf59Q7L2K0 433 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 SRLQ86TD4 932 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 VPS36Q86VN1 386 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 ZNF677Q86XU0 584 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 MED4Q9NPJ6 270 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 DNAJB4Q9UDY4 337 aa15.63■□□□□ 0.09
CXCL12-201ENST00000343575 FNDC1Q4ZHG4 1894 aaPredicted RBP15.62■□□□□ 0.09
CXCL12-201ENST00000343575 TMCO5BA8MYB1 307 aa15.62■□□□□ 0.09
CXCL12-201ENST00000343575 IPO7O95373 1038 aaKnown RBP15.62■□□□□ 0.09
CXCL12-201ENST00000343575 PAEPP09466 180 aa15.62■□□□□ 0.09
CXCL12-201ENST00000343575 GZMAP12544 262 aa15.62■□□□□ 0.09
CXCL12-201ENST00000343575 MCM3P25205 808 aa15.62■□□□□ 0.09
CXCL12-201ENST00000343575 LMO2P25791 158 aa15.62■□□□□ 0.09
CXCL12-201ENST00000343575 IKBKEQ14164 716 aa15.62■□□□□ 0.09
CXCL12-201ENST00000343575 PAN2Q504Q3 1202 aaKnown RBP15.62■□□□□ 0.09
CXCL12-201ENST00000343575 HSP90B2PQ58FF3 399 aa15.62■□□□□ 0.09
CXCL12-201ENST00000343575 KIAA1328Q86T90 577 aa15.62■□□□□ 0.09
CXCL12-201ENST00000343575 OSTM1Q86WC4 334 aa15.62■□□□□ 0.09
CXCL12-201ENST00000343575 FAM71BQ8TC56 605 aa15.62■□□□□ 0.09
CXCL12-201ENST00000343575 CYFIP2Q96F07 1278 aa15.62■□□□□ 0.09
CXCL12-201ENST00000343575 TMEM176AQ96HP8 235 aa15.62■□□□□ 0.09
CXCL12-201ENST00000343575 SENP8Q96LD8 212 aa15.62■□□□□ 0.09
CXCL12-201ENST00000343575 THAP12O43422 761 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 B3GAT3O94766 335 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 ACRP10323 421 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 GALCP54803 685 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 C10orf76Q5T2E6 689 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 WSCD1Q658N2 575 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 NPAS4Q8IUM7 802 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 WDTC1Q8N5D0 677 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 TOP6BLQ8N6T0 577 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 DDX27Q96GQ7 796 aaKnown RBP15.61■□□□□ 0.09
CXCL12-201ENST00000343575 LPIN3Q9BQK8 851 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 SEPT11Q9NVA2 429 aaKnown RBP15.61■□□□□ 0.09
CXCL12-201ENST00000343575 KANSL3Q9P2N6 904 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 GUCA1BQ9UMX6 200 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.61■□□□□ 0.09
CXCL12-201ENST00000343575 CTAGE9A4FU28 777 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 I3L4J1 428 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 CYB561D2O14569 222 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 GABRDO14764 452 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 KIF4AO95239 1232 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 BRCC3P46736 316 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 PDE4CQ08493 712 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 CLEC16AQ2KHT3 1053 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 DPH6Q7L8W6 267 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 C12orf29Q8N999 325 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 APPL2Q8NEU8 664 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 HASPINQ8TF76 798 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 NT5C1AQ9BXI3 368 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 DPEP3Q9H4B8 488 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 NRDE2Q9H7Z3 1164 aa15.61■□□□□ 0.09
CXCL12-201ENST00000343575 PUF60Q9UHX1 559 aaKnown RBP15.61■□□□□ 0.09
CXCL12-201ENST00000343575 RRP15Q9Y3B9 282 aaKnown RBP15.61■□□□□ 0.09
CXCL12-201ENST00000343575 ATP8B3O60423 1300 aa15.6■□□□□ 0.09
CXCL12-201ENST00000343575 ABHD14A-ACY1A0A1B0GW23 586 aa15.6■□□□□ 0.09
CXCL12-201ENST00000343575 FTLP02792 175 aaPredicted RBP15.6■□□□□ 0.09
CXCL12-201ENST00000343575 WARSP23381 471 aaKnown RBP15.6■□□□□ 0.09
CXCL12-201ENST00000343575 NOMO3P69849 1222 aa15.6■□□□□ 0.09
CXCL12-201ENST00000343575 DEFB103AP81534 67 aa15.6■□□□□ 0.09
CXCL12-201ENST00000343575 KIF5AQ12840 1032 aa15.6■□□□□ 0.09
CXCL12-201ENST00000343575 KIAA0319Q5VV43 1072 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms