RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W YOR352WQ08816 343 aa5.18□□□□□ -1.58
LSC1YOR142W PAA1Q12447 191 aaKnown RBP5.18□□□□□ -1.58
LSC1YOR142W RPL13AQ12690 199 aaPredicted RBP5.18□□□□□ -1.58
LSC1YOR142W YBR144CP34215 104 aa5.17□□□□□ -1.58
LSC1YOR142W YBL071CP38185 102 aa5.17□□□□□ -1.58
LSC1YOR142W MIC12P38341 106 aa5.17□□□□□ -1.58
LSC1YOR142W SLM6P38343 150 aa5.17□□□□□ -1.58
LSC1YOR142W YER137CP40083 148 aaKnown RBP5.17□□□□□ -1.58
LSC1YOR142W HXT14P42833 540 aa5.17□□□□□ -1.58
LSC1YOR142W PNC1P53184 216 aaKnown RBP5.17□□□□□ -1.58
LSC1YOR142W YGR018CP53211 109 aa5.17□□□□□ -1.58
LSC1YOR142W PDR17P53844 350 aa5.17□□□□□ -1.58
LSC1YOR142W YMR082CQ04276 118 aa5.17□□□□□ -1.58
LSC1YOR142W YPR013CQ12145 317 aa5.17□□□□□ -1.58
LSC1YOR142W TDH1P00360 332 aaKnown RBP5.16□□□□□ -1.58
LSC1YOR142W YCR022CP25620 114 aa5.16□□□□□ -1.58
LSC1YOR142W CDS1P38221 457 aa5.16□□□□□ -1.58
LSC1YOR142W QDR3P38227 689 aa5.16□□□□□ -1.58
LSC1YOR142W DOG2P38773 246 aa5.16□□□□□ -1.58
LSC1YOR142W DOG1P38774 246 aa5.16□□□□□ -1.58
LSC1YOR142W SNU13P39990 126 aaKnown RBP5.16□□□□□ -1.58
LSC1YOR142W YNL194CP40169 301 aa5.16□□□□□ -1.58
LSC1YOR142W AGX1P43567 385 aa5.16□□□□□ -1.58
LSC1YOR142W CAX4P53223 239 aa5.16□□□□□ -1.58
LSC1YOR142W YGL194C-AQ2V2P6 80 aa5.16□□□□□ -1.58
LSC1YOR142W ISN1Q99312 450 aa5.16□□□□□ -1.58
LSC1YOR142W RPS25BP0C0T4 108 aaKnown RBP5.15□□□□□ -1.59
LSC1YOR142W UTR5P32630 166 aa5.15□□□□□ -1.59
LSC1YOR142W RTC3P38804 111 aaPredicted RBP5.15□□□□□ -1.59
LSC1YOR142W BDH1P39714 382 aa5.15□□□□□ -1.59
LSC1YOR142W YGR269WP40326 108 aa5.15□□□□□ -1.59
LSC1YOR142W YJR015WP47090 510 aa5.15□□□□□ -1.59
LSC1YOR142W BUL1P48524 976 aa5.15□□□□□ -1.59
LSC1YOR142W DID2P69771 204 aa5.15□□□□□ -1.59
LSC1YOR142W TIM44Q01852 431 aa5.15□□□□□ -1.59
LSC1YOR142W POS5Q06892 414 aa5.15□□□□□ -1.59
LSC1YOR142W PRR2Q12310 699 aa5.15□□□□□ -1.59
LSC1YOR142W POM34Q12445 299 aa5.15□□□□□ -1.59
LSC1YOR142W RPS25AQ3E792 108 aaPredicted RBP5.15□□□□□ -1.59
LSC1YOR142W TAR1Q8TGM6 124 aa5.15□□□□□ -1.59
LSC1YOR142W YHR213W-AQ8TGT4 77 aa5.15□□□□□ -1.59
LSC1YOR142W CYC3P06182 269 aa5.14□□□□□ -1.59
LSC1YOR142W MDM10P18409 493 aa5.14□□□□□ -1.59
LSC1YOR142W RRT1P38192 103 aa5.14□□□□□ -1.59
LSC1YOR142W CSH1P38287 376 aa5.14□□□□□ -1.59
LSC1YOR142W MRPL49P40858 161 aaPredicted RBP5.14□□□□□ -1.59
LSC1YOR142W YJL027CP47063 138 aaPredicted RBP5.14□□□□□ -1.59
LSC1YOR142W YGL117WP53133 265 aa5.14□□□□□ -1.59
LSC1YOR142W YLR122CQ12312 125 aa5.14□□□□□ -1.59
LSC1YOR142W YMR316C-AI2HB70 103 aa5.13□□□□□ -1.59
LSC1YOR142W PIS1P06197 220 aaKnown RBP5.13□□□□□ -1.59
LSC1YOR142W POP5P28005 173 aa5.13□□□□□ -1.59
LSC1YOR142W UPS2P35200 230 aa5.13□□□□□ -1.59
LSC1YOR142W TAD2P47058 250 aa5.13□□□□□ -1.59
LSC1YOR142W LST7P53237 242 aa5.13□□□□□ -1.59
LSC1YOR142W COX18P53239 316 aa5.13□□□□□ -1.59
LSC1YOR142W YAP1802P53309 568 aa5.13□□□□□ -1.59
LSC1YOR142W NCE103P53615 221 aa5.13□□□□□ -1.59
LSC1YOR142W ARR3Q06598 404 aa5.13□□□□□ -1.59
LSC1YOR142W TIM18Q08749 192 aa5.13□□□□□ -1.59
LSC1YOR142W AGC1Q12482 902 aa5.13□□□□□ -1.59
LSC1YOR142W ELO2P25358 347 aa5.12□□□□□ -1.59
LSC1YOR142W AVT5P38176 459 aa5.12□□□□□ -1.59
LSC1YOR142W GLE2P40066 365 aa5.12□□□□□ -1.59
LSC1YOR142W GRH1Q04410 372 aaKnown RBP5.12□□□□□ -1.59
LSC1YOR142W ANT1Q06497 328 aa5.12□□□□□ -1.59
LSC1YOR142W CDC7P06243 507 aa5.11□□□□□ -1.59
LSC1YOR142W GCN3P14741 305 aa5.11□□□□□ -1.59
LSC1YOR142W FPR2P32472 135 aa5.11□□□□□ -1.59
LSC1YOR142W ALK2P32789 676 aaPredicted RBP5.11□□□□□ -1.59
LSC1YOR142W MST28P39552 234 aa5.11□□□□□ -1.59
LSC1YOR142W YEA4P40004 342 aa5.11□□□□□ -1.59
LSC1YOR142W SWM2P40342 146 aa5.11□□□□□ -1.59
LSC1YOR142W YPI1P43587 155 aa5.11□□□□□ -1.59
LSC1YOR142W MST27P53176 234 aa5.11□□□□□ -1.59
LSC1YOR142W ATG39Q06159 398 aa5.11□□□□□ -1.59
LSC1YOR142W TDA6Q06466 467 aa5.11□□□□□ -1.59
LSC1YOR142W BER1Q06688 274 aaKnown RBP5.11□□□□□ -1.59
LSC1YOR142W YDL242WQ07746 117 aa5.11□□□□□ -1.59
LSC1YOR142W MRP10O75012 95 aa5.1□□□□□ -1.59
LSC1YOR142W YHR213WP0CI67 198 aa5.1□□□□□ -1.59
LSC1YOR142W MRPL33P20084 86 aa5.1□□□□□ -1.59
LSC1YOR142W SIP1P32578 815 aa5.1□□□□□ -1.59
LSC1YOR142W ECM33P38248 429 aaKnown RBP5.1□□□□□ -1.59
LSC1YOR142W POR2P40478 281 aa5.1□□□□□ -1.59
LSC1YOR142W RTS2P40962 232 aa5.1□□□□□ -1.59
LSC1YOR142W CAF16P43569 289 aa5.1□□□□□ -1.59
LSC1YOR142W HST4P53688 370 aa5.1□□□□□ -1.59
LSC1YOR142W BOR1P53838 576 aa5.1□□□□□ -1.59
LSC1YOR142W SHH3Q04487 196 aa5.1□□□□□ -1.59
LSC1YOR142W CTR3Q06686 241 aa5.1□□□□□ -1.59
LSC1YOR142W YDR157WA0A023PZE8 133 aa5.09□□□□□ -1.59
LSC1YOR142W MAG1P22134 296 aaKnown RBP5.09□□□□□ -1.59
LSC1YOR142W SHB17P36136 271 aaKnown RBP5.09□□□□□ -1.59
LSC1YOR142W MPC2P38857 129 aa5.09□□□□□ -1.59
LSC1YOR142W IMP2P46972 177 aa5.09□□□□□ -1.59
LSC1YOR142W ATG27P46989 271 aa5.09□□□□□ -1.59
LSC1YOR142W MIC27P50945 234 aa5.09□□□□□ -1.59
LSC1YOR142W YGR025WP53216 100 aa5.09□□□□□ -1.59
LSC1YOR142W ERV25P54837 211 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms