RNA–Protein interactions for RNA: YNL161W

CBK1, Transcript of Serine/threonine protein kinase of the the RAM signaling network, yeast

Gene CBK1, Length 2,271 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBK1	YNL161W	RPE1	P46969	238 aa		5.74	□□□□□ -1.49
CBK1	YNL161W	TDA4	P47153	279 aa		5.74	□□□□□ -1.49
CBK1	YNL161W	PBA1	Q05778	276 aa		5.74	□□□□□ -1.49
CBK1	YNL161W	DGK1	Q12382	290 aa		5.74	□□□□□ -1.49
CBK1	YNL161W	YOR020W-A	Q3E824	90 aa		5.74	□□□□□ -1.49
CBK1	YNL161W	ROM2	P51862	1356 aa	Known RBP	5.74	□□□□□ -1.49
CBK1	YNL161W	PTH1	P38876	190 aa	Known RBP	5.74	□□□□□ -1.49
CBK1	YNL161W	REE1	P40893	198 aa		5.74	□□□□□ -1.49
CBK1	YNL161W	FIP1	P45976	327 aa		5.74	□□□□□ -1.49
CBK1	YNL161W	DFM1	Q12743	341 aa	Known RBP	5.74	□□□□□ -1.49
CBK1	YNL161W	YPR170W-B	P0C5R9	85 aa		5.73	□□□□□ -1.49
CBK1	YNL161W	GSP1	P32835	219 aa	Known RBP	5.73	□□□□□ -1.49
CBK1	YNL161W	GSP2	P32836	220 aa	Known RBP	5.73	□□□□□ -1.49
CBK1	YNL161W	TEM1	P38987	245 aa		5.73	□□□□□ -1.49
CBK1	YNL161W	UFD1	P53044	361 aa		5.73	□□□□□ -1.49
CBK1	YNL161W	YGR219W	P53307	113 aa		5.73	□□□□□ -1.49
CBK1	YNL161W	DIG2	Q03373	323 aa	Known RBP	5.73	□□□□□ -1.49
CBK1	YNL161W	PRP11	Q07350	266 aa	Predicted RBP	5.73	□□□□□ -1.49
CBK1	YNL161W	MCP1	Q12106	302 aa		5.73	□□□□□ -1.49
CBK1	YNL161W	RFS1	P38234	210 aa	Known RBP	5.73	□□□□□ -1.49
CBK1	YNL161W	MIG3	P39943	394 aa		5.73	□□□□□ -1.49
CBK1	YNL161W	SLM2	P53955	656 aa		5.73	□□□□□ -1.49
CBK1	YNL161W	OSH6	Q02201	448 aa		5.73	□□□□□ -1.49
CBK1	YNL161W	YPL225W	Q08971	146 aa	Known RBP	5.73	□□□□□ -1.49
CBK1	YNL161W	VMA7	P39111	118 aa		5.72	□□□□□ -1.49
CBK1	YNL161W	BOR1	P53838	576 aa		5.72	□□□□□ -1.49
CBK1	YNL161W	IRC25	Q07951	179 aa		5.72	□□□□□ -1.49
CBK1	YNL161W	TFC1	P32367	649 aa		5.72	□□□□□ -1.49
CBK1	YNL161W	ASK1	P35734	292 aa		5.72	□□□□□ -1.49
CBK1	YNL161W	MRPL24	P36525	258 aa	Predicted RBP	5.72	□□□□□ -1.49
CBK1	YNL161W	YOL029C	Q08187	201 aa		5.72	□□□□□ -1.49
CBK1	YNL161W	OM14	P38325	134 aa		5.71	□□□□□ -1.5
CBK1	YNL161W	YGL118C	P53132	145 aa		5.71	□□□□□ -1.5
CBK1	YNL161W	CNL1	Q06333	122 aa		5.71	□□□□□ -1.5
CBK1	YNL161W	YPL264C	Q08980	353 aa		5.71	□□□□□ -1.5
CBK1	YNL161W	YLR099W-A	Q3E798	87 aa		5.71	□□□□□ -1.5
CBK1	YNL161W	POP4	P38336	279 aa		5.71	□□□□□ -1.5
CBK1	YNL161W	YNL200C	P40165	246 aa	Known RBP	5.71	□□□□□ -1.5
CBK1	YNL161W	YDR366C	P87287	132 aa		5.71	□□□□□ -1.5
CBK1	YNL161W	RPC19	P28000	142 aa	Known RBP	5.7	□□□□□ -1.5
CBK1	YNL161W	YPT53	P36019	220 aa		5.7	□□□□□ -1.5
CBK1	YNL161W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
CBK1	YNL161W	PAN3	P36102	679 aa	Predicted RBP	5.7	□□□□□ -1.5
CBK1	YNL161W	RIM15	P43565	1770 aa		5.7	□□□□□ -1.5
CBK1	YNL161W	YLR156W	P0CE96	114 aa		5.69	□□□□□ -1.5
CBK1	YNL161W	YLR159W	P0CE97	114 aa		5.69	□□□□□ -1.5
CBK1	YNL161W	YLR161W	P0CE98	114 aa		5.69	□□□□□ -1.5
CBK1	YNL161W	TOM40	P23644	387 aa	Known RBP	5.69	□□□□□ -1.5
CBK1	YNL161W	SFC1	P33303	322 aa		5.69	□□□□□ -1.5
CBK1	YNL161W	ASP1	P38986	381 aa	Predicted RBP	5.69	□□□□□ -1.5
CBK1	YNL161W	XPT1	P47165	209 aa		5.69	□□□□□ -1.5
CBK1	YNL161W	SLD7	Q08457	257 aa		5.69	□□□□□ -1.5
CBK1	YNL161W	SRL1	Q08673	210 aa		5.69	□□□□□ -1.5
CBK1	YNL161W	YIR021W-A	Q3E739	70 aa		5.69	□□□□□ -1.5
CBK1	YNL161W	REP2	P03872	296 aa		5.69	□□□□□ -1.5
CBK1	YNL161W	NMT1	P14743	455 aa		5.69	□□□□□ -1.5
CBK1	YNL161W	MIC19	P43594	170 aa		5.69	□□□□□ -1.5
CBK1	YNL161W	VPS71	Q03433	280 aa		5.69	□□□□□ -1.5
CBK1	YNL161W	TVP15	Q03860	143 aa		5.69	□□□□□ -1.5
CBK1	YNL161W	ATP15	P21306	62 aa		5.68	□□□□□ -1.5
CBK1	YNL161W	BET1	P22804	142 aa		5.68	□□□□□ -1.5
CBK1	YNL161W	RGI1	P40043	161 aa	Predicted RBP	5.68	□□□□□ -1.5
CBK1	YNL161W	IGD1	P43598	195 aa		5.68	□□□□□ -1.5
CBK1	YNL161W	ATO3	Q12359	275 aa		5.68	□□□□□ -1.5
CBK1	YNL161W	TAD3	Q9URQ3	322 aa		5.68	□□□□□ -1.5
CBK1	YNL161W	GLR1	P41921	483 aa	Known RBP	5.68	□□□□□ -1.5
CBK1	YNL161W	YFL019C	P43576	117 aa		5.68	□□□□□ -1.5
CBK1	YNL161W	APJ1	P53940	528 aa		5.68	□□□□□ -1.5
CBK1	YNL161W	NAT3	Q06504	195 aa		5.68	□□□□□ -1.5
CBK1	YNL161W	GEP5	Q12393	293 aa		5.68	□□□□□ -1.5
CBK1	YNL161W	HYM1	P32464	399 aa		5.67	□□□□□ -1.5
CBK1	YNL161W	HYR1	P40581	163 aa	Known RBP	5.67	□□□□□ -1.5
CBK1	YNL161W	PFS2	P42841	465 aa	Known RBP	5.67	□□□□□ -1.5
CBK1	YNL161W	SER2	P42941	309 aa		5.67	□□□□□ -1.5
CBK1	YNL161W	YGR039W	P53225	103 aa		5.67	□□□□□ -1.5
CBK1	YNL161W	SCW4	P53334	386 aa	Known RBP	5.67	□□□□□ -1.5
CBK1	YNL161W	YAL067W-A	Q8TGK6	75 aa		5.67	□□□□□ -1.5
CBK1	YNL161W	YML100W-A	Q8TGT0	57 aa		5.67	□□□□□ -1.5
CBK1	YNL161W	ADK1	P07170	222 aa	Known RBP	5.67	□□□□□ -1.5
CBK1	YNL161W	ALG9	P53868	555 aa	Known RBP	5.67	□□□□□ -1.5
CBK1	YNL161W	APS2	Q00381	147 aa		5.67	□□□□□ -1.5
CBK1	YNL161W	YOL014W	Q08110	124 aa		5.67	□□□□□ -1.5
CBK1	YNL161W	YDL211C	Q12121	372 aa		5.67	□□□□□ -1.5
CBK1	YNL161W	FYV7	Q12247	151 aa		5.67	□□□□□ -1.5
CBK1	YNL161W	PSF1	Q12488	208 aa		5.67	□□□□□ -1.5
CBK1	YNL161W	YOL085C	Q99345	113 aa		5.67	□□□□□ -1.5
CBK1	YNL161W	SPT14	P32363	452 aa		5.66	□□□□□ -1.5
CBK1	YNL161W	HHO1	P53551	258 aa		5.66	□□□□□ -1.5
CBK1	YNL161W	RSM10	Q03201	203 aa		5.66	□□□□□ -1.5
CBK1	YNL161W	PRE7	P23724	241 aa	Known RBP	5.65	□□□□□ -1.5
CBK1	YNL161W	NSG1	P38837	291 aa		5.65	□□□□□ -1.5
CBK1	YNL161W	CGI121	Q03705	181 aa	Known RBP	5.65	□□□□□ -1.5
CBK1	YNL161W	PST1	Q12355	444 aa		5.65	□□□□□ -1.5
CBK1	YNL161W	SGA1	P08019	549 aa		5.65	□□□□□ -1.51
CBK1	YNL161W	ATP5	P09457	212 aa		5.65	□□□□□ -1.51
CBK1	YNL161W	PHO85	P17157	305 aa		5.65	□□□□□ -1.51
CBK1	YNL161W	PTC1	P35182	281 aa		5.65	□□□□□ -1.51
CBK1	YNL161W	YER181C	P40097	107 aa		5.65	□□□□□ -1.51
CBK1	YNL161W	AYR1	P40471	297 aa		5.65	□□□□□ -1.51
CBK1	YNL161W	YBL059W	P34224	193 aa		5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms