RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W EOS1P53938 366 aa3.17□□□□□ -1.9
USA1YML029W YDR415CQ04033 374 aaPredicted RBP3.17□□□□□ -1.9
USA1YML029W YLR179CQ06252 201 aaKnown RBP3.17□□□□□ -1.9
USA1YML029W BER1Q06688 274 aaKnown RBP3.17□□□□□ -1.9
USA1YML029W ATG5Q12380 294 aa3.17□□□□□ -1.9
USA1YML029W YBR255C-AQ3E776 120 aa3.17□□□□□ -1.9
USA1YML029W YBR085C-AO43137 85 aa3.16□□□□□ -1.9
USA1YML029W ERV1P27882 189 aa3.16□□□□□ -1.9
USA1YML029W YKL162CP36052 402 aa3.16□□□□□ -1.9
USA1YML029W YPL264CQ08980 353 aa3.16□□□□□ -1.9
USA1YML029W FCF2Q12035 217 aaPredicted RBP3.16□□□□□ -1.9
USA1YML029W LSO2Q3E772 92 aaKnown RBP3.16□□□□□ -1.9
USA1YML029W PRS4P38063 326 aaPredicted RBP3.16□□□□□ -1.9
USA1YML029W UBC12P52491 188 aa3.16□□□□□ -1.9
USA1YML029W TIM44Q01852 431 aa3.16□□□□□ -1.9
USA1YML029W HOF1Q05080 669 aa3.16□□□□□ -1.9
USA1YML029W MSC3Q05812 728 aa3.16□□□□□ -1.9
USA1YML029W SRL1Q08673 210 aa3.16□□□□□ -1.9
USA1YML029W AIM45Q12480 344 aaKnown RBP3.16□□□□□ -1.9
USA1YML029W CMC2Q3E7A4 109 aa3.16□□□□□ -1.9
USA1YML029W COA2Q3E823 68 aa3.16□□□□□ -1.9
USA1YML029W YOS1Q3E834 85 aa3.16□□□□□ -1.9
USA1YML029W UBI4P0CG63 381 aaKnown RBP3.15□□□□□ -1.91
USA1YML029W YKL102CP34249 101 aa3.15□□□□□ -1.91
USA1YML029W YEA4P40004 342 aa3.15□□□□□ -1.91
USA1YML029W ARP3P47117 449 aaKnown RBP3.15□□□□□ -1.91
USA1YML029W BUL1P48524 976 aa3.15□□□□□ -1.91
USA1YML029W GLO1P50107 326 aa3.15□□□□□ -1.91
USA1YML029W YMR090WQ04304 227 aaKnown RBP3.15□□□□□ -1.91
USA1YML029W YHR213W-AQ8TGT4 77 aa3.15□□□□□ -1.91
USA1YML029W INO2P26798 304 aa3.15□□□□□ -1.91
USA1YML029W PEX7P39108 375 aa3.15□□□□□ -1.91
USA1YML029W COX15P40086 486 aa3.15□□□□□ -1.91
USA1YML029W YNL194CP40169 301 aa3.15□□□□□ -1.91
USA1YML029W YMR082CQ04276 118 aa3.15□□□□□ -1.91
USA1YML029W FSH2Q05015 223 aa3.15□□□□□ -1.91
USA1YML029W ATP14Q12349 124 aa3.15□□□□□ -1.91
USA1YML029W SHG1P38337 142 aa3.14□□□□□ -1.91
USA1YML029W GET2P40056 285 aa3.14□□□□□ -1.91
USA1YML029W PHO23P50947 330 aa3.14□□□□□ -1.91
USA1YML029W YGR050CP53231 118 aa3.14□□□□□ -1.91
USA1YML029W SPG4Q04438 115 aa3.14□□□□□ -1.91
USA1YML029W GIM5Q04493 163 aa3.14□□□□□ -1.91
USA1YML029W URA2P07259 2214 aaKnown RBP3.14□□□□□ -1.91
USA1YML029W CGR1P53188 120 aa3.14□□□□□ -1.91
USA1YML029W CAF40P53829 373 aa3.14□□□□□ -1.91
USA1YML029W PDR17P53844 350 aa3.14□□□□□ -1.91
USA1YML029W YCR025CP25352 136 aa3.13□□□□□ -1.91
USA1YML029W SDH8P38345 138 aa3.13□□□□□ -1.91
USA1YML029W EMC5P40540 141 aa3.13□□□□□ -1.91
USA1YML029W YJL213WP40896 331 aa3.13□□□□□ -1.91
USA1YML029W HXT14P42833 540 aa3.13□□□□□ -1.91
USA1YML029W AGC1Q12482 902 aa3.13□□□□□ -1.91
USA1YML029W HTB1P02293 131 aaKnown RBP3.13□□□□□ -1.91
USA1YML029W URA5P13298 226 aaKnown RBP3.13□□□□□ -1.91
USA1YML029W SIP1P32578 815 aa3.13□□□□□ -1.91
USA1YML029W SHB17P36136 271 aaKnown RBP3.13□□□□□ -1.91
USA1YML029W YBR292CP38357 123 aa3.13□□□□□ -1.91
USA1YML029W PET100P38958 111 aa3.13□□□□□ -1.91
USA1YML029W NSA2P40078 261 aaKnown RBP3.13□□□□□ -1.91
USA1YML029W CDC40P40968 455 aaPredicted RBP3.13□□□□□ -1.91
USA1YML029W YGR219WP53307 113 aa3.13□□□□□ -1.91
USA1YML029W HCH1P53834 153 aa3.13□□□□□ -1.91
USA1YML029W APJ1P53940 528 aa3.13□□□□□ -1.91
USA1YML029W YCL001W-AP87012 153 aa3.13□□□□□ -1.91
USA1YML029W YML108WQ03759 105 aa3.13□□□□□ -1.91
USA1YML029W YMR166CQ03829 368 aa3.13□□□□□ -1.91
USA1YML029W TMA10Q06177 86 aa3.13□□□□□ -1.91
USA1YML029W ARR3Q06598 404 aa3.13□□□□□ -1.91
USA1YML029W PRR2Q12310 699 aa3.13□□□□□ -1.91
USA1YML029W YLR415CO13578 112 aa3.12□□□□□ -1.91
USA1YML029W COX2P00410 251 aa3.12□□□□□ -1.91
USA1YML029W ZRC1P20107 442 aa3.12□□□□□ -1.91
USA1YML029W UPS2P35200 230 aa3.12□□□□□ -1.91
USA1YML029W DAD2P36162 133 aa3.12□□□□□ -1.91
USA1YML029W MIC12P38341 106 aa3.12□□□□□ -1.91
USA1YML029W DOG2P38773 246 aa3.12□□□□□ -1.91
USA1YML029W DOG1P38774 246 aa3.12□□□□□ -1.91
USA1YML029W LSM4P40070 187 aaKnown RBP3.12□□□□□ -1.91
USA1YML029W DFG10P40526 253 aa3.12□□□□□ -1.91
USA1YML029W YNR066CP53752 436 aa3.12□□□□□ -1.91
USA1YML029W ODC1Q03028 310 aa3.12□□□□□ -1.91
USA1YML029W YNK1P36010 153 aaKnown RBP3.12□□□□□ -1.91
USA1YML029W YAR068WP39564 161 aa3.12□□□□□ -1.91
USA1YML029W URM1P40554 99 aaPredicted RBP3.12□□□□□ -1.91
USA1YML029W SAS2P40963 338 aa3.12□□□□□ -1.91
USA1YML029W TAX4P47030 604 aa3.12□□□□□ -1.91
USA1YML029W SNN1P48232 102 aa3.12□□□□□ -1.91
USA1YML029W COX18P53239 316 aa3.12□□□□□ -1.91
USA1YML029W CRH1P53301 507 aa3.12□□□□□ -1.91
USA1YML029W FRQ1Q06389 190 aa3.12□□□□□ -1.91
USA1YML029W TDA6Q06466 467 aa3.12□□□□□ -1.91
USA1YML029W YDL242WQ07746 117 aa3.12□□□□□ -1.91
USA1YML029W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
USA1YML029W PRM3Q08931 133 aa3.12□□□□□ -1.91
USA1YML029W ATO3Q12359 275 aa3.12□□□□□ -1.91
USA1YML029W POM34Q12445 299 aa3.12□□□□□ -1.91
USA1YML029W MRPL23Q12487 163 aaPredicted RBP3.12□□□□□ -1.91
USA1YML029W YGR035W-AQ45U48 73 aa3.12□□□□□ -1.91
USA1YML029W NOP1P15646 327 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms