RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C YLL053CP0CD98 152 aa6.34□□□□□ -1.39
AFG2YLR397C PAU1P0CE88 120 aa6.34□□□□□ -1.39
AFG2YLR397C PAU14P0CE89 120 aa6.34□□□□□ -1.39
AFG2YLR397C PAU6P0CE90 120 aa6.34□□□□□ -1.39
AFG2YLR397C PAU18P0CE91 120 aa6.34□□□□□ -1.39
AFG2YLR397C PAU8P0CE92 120 aa6.34□□□□□ -1.39
AFG2YLR397C PAU11P0CE93 120 aa6.34□□□□□ -1.39
AFG2YLR397C RPL12AP0CX53 165 aaKnown RBP6.34□□□□□ -1.39
AFG2YLR397C RPL12BP0CX54 165 aa6.34□□□□□ -1.39
AFG2YLR397C CSE2P33308 149 aa6.34□□□□□ -1.39
AFG2YLR397C SHB17P36136 271 aaKnown RBP6.34□□□□□ -1.39
AFG2YLR397C GEX2P36173 615 aa6.34□□□□□ -1.39
AFG2YLR397C PAU13P38725 120 aa6.34□□□□□ -1.39
AFG2YLR397C PAU4P53427 120 aa6.34□□□□□ -1.39
AFG2YLR397C RHO5P53879 331 aaKnown RBP6.34□□□□□ -1.39
AFG2YLR397C PAU10Q03050 120 aa6.34□□□□□ -1.39
AFG2YLR397C TRI1Q05024 226 aa6.34□□□□□ -1.39
AFG2YLR397C PAU20Q08322 120 aa6.34□□□□□ -1.39
AFG2YLR397C PAU9Q3E770 120 aa6.34□□□□□ -1.39
AFG2YLR397C POX1P13711 748 aa6.34□□□□□ -1.39
AFG2YLR397C ERG8P24521 451 aa6.34□□□□□ -1.39
AFG2YLR397C SRP14P38985 146 aa6.34□□□□□ -1.39
AFG2YLR397C SCD6P45978 349 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
AFG2YLR397C PRY1P47032 299 aa6.34□□□□□ -1.39
AFG2YLR397C SPG3Q04398 127 aaPredicted RBP6.34□□□□□ -1.39
AFG2YLR397C LIP2Q06005 328 aa6.34□□□□□ -1.39
AFG2YLR397C OPI10Q08202 246 aa6.34□□□□□ -1.39
AFG2YLR397C YIL102C-AQ2V2P5 75 aa6.34□□□□□ -1.39
AFG2YLR397C ATG40Q99325 256 aa6.34□□□□□ -1.39
AFG2YLR397C YAR066WP0CX18 203 aa6.33□□□□□ -1.4
AFG2YLR397C YHR214WP0CX19 203 aa6.33□□□□□ -1.4
AFG2YLR397C YHR097CP38809 366 aaKnown RBP6.33□□□□□ -1.4
AFG2YLR397C YDL242WQ07746 117 aa6.33□□□□□ -1.4
AFG2YLR397C YBR121C-AP0C5L4 52 aa6.33□□□□□ -1.4
AFG2YLR397C HXT4P32467 576 aa6.33□□□□□ -1.4
AFG2YLR397C SGE1P33335 543 aa6.33□□□□□ -1.4
AFG2YLR397C GCS1P35197 352 aa6.33□□□□□ -1.4
AFG2YLR397C YIL059CP40520 121 aa6.33□□□□□ -1.4
AFG2YLR397C YIR016WP40572 265 aa6.33□□□□□ -1.4
AFG2YLR397C EGT2P42835 1041 aa6.33□□□□□ -1.4
AFG2YLR397C XYL2Q07993 356 aa6.33□□□□□ -1.4
AFG2YLR397C YOR376WQ08900 122 aa6.33□□□□□ -1.4
AFG2YLR397C YLR149CQ99296 730 aa6.33□□□□□ -1.4
AFG2YLR397C YCR025CP25352 136 aa6.32□□□□□ -1.4
AFG2YLR397C TIM23P32897 222 aa6.32□□□□□ -1.4
AFG2YLR397C AUR1P36107 401 aaPredicted RBP6.32□□□□□ -1.4
AFG2YLR397C ECM14P38836 430 aa6.32□□□□□ -1.4
AFG2YLR397C RPB11P38902 120 aa6.32□□□□□ -1.4
AFG2YLR397C HMF1P40037 129 aaKnown RBP6.32□□□□□ -1.4
AFG2YLR397C SCS3P53012 380 aa6.32□□□□□ -1.4
AFG2YLR397C BET5Q03630 159 aa6.32□□□□□ -1.4
AFG2YLR397C SYM1Q06563 197 aa6.32□□□□□ -1.4
AFG2YLR397C YDL218WQ07629 317 aa6.32□□□□□ -1.4
AFG2YLR397C TAD3Q9URQ3 322 aa6.32□□□□□ -1.4
AFG2YLR397C FMP49A0A023PZB3 126 aa6.32□□□□□ -1.4
AFG2YLR397C CPT1P17898 393 aa6.32□□□□□ -1.4
AFG2YLR397C GPX1P36014 167 aa6.32□□□□□ -1.4
AFG2YLR397C YJL213WP40896 331 aa6.32□□□□□ -1.4
AFG2YLR397C DGA1Q08650 418 aa6.32□□□□□ -1.4
AFG2YLR397C ORT1Q12375 292 aa6.32□□□□□ -1.4
AFG2YLR397C YIL169CP40442 995 aa6.31□□□□□ -1.4
AFG2YLR397C YFR020WP43600 232 aa6.31□□□□□ -1.4
AFG2YLR397C ARP3P47117 449 aaKnown RBP6.31□□□□□ -1.4
AFG2YLR397C YMR320WQ04897 101 aa6.31□□□□□ -1.4
AFG2YLR397C COA2Q3E823 68 aa6.31□□□□□ -1.4
AFG2YLR397C YOR338WQ99326 363 aa6.31□□□□□ -1.4
AFG2YLR397C CMC1P36064 111 aa6.31□□□□□ -1.4
AFG2YLR397C CCS1P40202 249 aaKnown RBP6.31□□□□□ -1.4
AFG2YLR397C MZM1Q03429 123 aaPredicted RBP6.31□□□□□ -1.4
AFG2YLR397C MRPL1Q04599 285 aa6.31□□□□□ -1.4
AFG2YLR397C MRPL51Q06090 140 aaPredicted RBP6.31□□□□□ -1.4
AFG2YLR397C YRA1Q12159 226 aaKnown RBP6.31□□□□□ -1.4
AFG2YLR397C MRS1P07266 363 aa6.3□□□□□ -1.4
AFG2YLR397C XBP1P40489 647 aa6.3□□□□□ -1.4
AFG2YLR397C ALG13P53178 202 aa6.3□□□□□ -1.4
AFG2YLR397C YPR071WQ12346 211 aa6.3□□□□□ -1.4
AFG2YLR397C RPS28BP0C0X0 67 aaKnown RBP6.3□□□□□ -1.4
AFG2YLR397C YOL162WP0CF19 215 aa6.3□□□□□ -1.4
AFG2YLR397C YEL073CP39974 107 aa6.3□□□□□ -1.4
AFG2YLR397C XPT1P47165 209 aa6.3□□□□□ -1.4
AFG2YLR397C BXI1P48558 297 aa6.3□□□□□ -1.4
AFG2YLR397C RPS28AQ3E7X9 67 aaPredicted RBP6.3□□□□□ -1.4
AFG2YLR397C CTA1P15202 515 aa6.29□□□□□ -1.4
AFG2YLR397C YCR007CP25354 239 aa6.29□□□□□ -1.4
AFG2YLR397C SRP21P32342 167 aa6.29□□□□□ -1.4
AFG2YLR397C SPS18P32572 300 aa6.29□□□□□ -1.4
AFG2YLR397C SNF11P38956 169 aa6.29□□□□□ -1.4
AFG2YLR397C CTK2P46962 323 aa6.29□□□□□ -1.4
AFG2YLR397C KNH1P50112 268 aa6.29□□□□□ -1.4
AFG2YLR397C AIM34Q03673 198 aa6.29□□□□□ -1.4
AFG2YLR397C YMR082CQ04276 118 aa6.29□□□□□ -1.4
AFG2YLR397C YBR090CP38253 122 aa6.28□□□□□ -1.4
AFG2YLR397C YBR292CP38357 123 aa6.28□□□□□ -1.4
AFG2YLR397C YNL195CP40168 261 aa6.28□□□□□ -1.4
AFG2YLR397C ERF2Q06551 359 aa6.28□□□□□ -1.4
AFG2YLR397C DAP1Q12091 152 aa6.28□□□□□ -1.4
AFG2YLR397C AIM7Q12156 149 aa6.28□□□□□ -1.4
AFG2YLR397C MRPL49P40858 161 aaPredicted RBP6.28□□□□□ -1.4
AFG2YLR397C SUN4P53616 420 aa6.28□□□□□ -1.4
AFG2YLR397C YMR090WQ04304 227 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 70.7 ms