RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W RPS12P48589 143 aaKnown RBP1.92□□□□□ -2.1
HRD3YLR207W ERV29P53337 310 aa1.92□□□□□ -2.1
HRD3YLR207W MIX14Q04341 121 aa1.92□□□□□ -2.1
HRD3YLR207W API2Q04413 109 aa1.92□□□□□ -2.1
HRD3YLR207W TRM10Q12400 293 aa1.92□□□□□ -2.1
HRD3YLR207W RDI1Q12434 202 aa1.92□□□□□ -2.1
HRD3YLR207W ZRT3P34240 503 aa1.91□□□□□ -2.1
HRD3YLR207W KRE9P39005 276 aa1.91□□□□□ -2.1
HRD3YLR207W AGE2P40529 298 aa1.91□□□□□ -2.1
HRD3YLR207W CUP9P41817 306 aa1.91□□□□□ -2.1
HRD3YLR207W LSM7P53905 115 aaKnown RBP1.91□□□□□ -2.1
HRD3YLR207W AIM34Q03673 198 aa1.91□□□□□ -2.1
HRD3YLR207W RNH202Q05635 350 aa1.91□□□□□ -2.1
HRD3YLR207W YLR179CQ06252 201 aaKnown RBP1.91□□□□□ -2.1
HRD3YLR207W YPR127WQ06494 345 aa1.91□□□□□ -2.1
HRD3YLR207W YOL029CQ08187 201 aa1.91□□□□□ -2.1
HRD3YLR207W SPC3Q12133 184 aa1.91□□□□□ -2.1
HRD3YLR207W BPH1P25356 2167 aa1.91□□□□□ -2.1
HRD3YLR207W CUP1-1P0CX80 61 aa1.91□□□□□ -2.1
HRD3YLR207W CUP1-2P0CX81 61 aa1.91□□□□□ -2.1
HRD3YLR207W PCL1P24867 279 aa1.91□□□□□ -2.1
HRD3YLR207W STP22P25604 385 aa1.91□□□□□ -2.1
HRD3YLR207W SMP1P38128 452 aa1.91□□□□□ -2.1
HRD3YLR207W PAM16P42949 149 aa1.91□□□□□ -2.1
HRD3YLR207W YNR062CP53748 327 aa1.91□□□□□ -2.1
HRD3YLR207W SWP1Q02795 286 aa1.91□□□□□ -2.1
HRD3YLR207W PAL1Q05518 499 aaKnown RBP1.91□□□□□ -2.1
HRD3YLR207W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
HRD3YLR207W HRT1Q08273 121 aa1.91□□□□□ -2.1
HRD3YLR207W YPL264CQ08980 353 aa1.91□□□□□ -2.1
HRD3YLR207W IES3Q12345 250 aa1.91□□□□□ -2.1
HRD3YLR207W YAL063C-AQ3E791 96 aa1.91□□□□□ -2.1
HRD3YLR207W KIN28P06242 306 aa1.9□□□□□ -2.1
HRD3YLR207W MDH3P32419 343 aaKnown RBP RIP-Chip data1.9□□□□□ -2.1not detected
HRD3YLR207W CLG1P35190 452 aa1.9□□□□□ -2.1
HRD3YLR207W YBR285WP38354 144 aa1.9□□□□□ -2.1
HRD3YLR207W VMA22P38784 181 aa1.9□□□□□ -2.1
HRD3YLR207W YHR180WP38868 163 aa1.9□□□□□ -2.1
HRD3YLR207W ALB1P47019 175 aaPredicted RBP1.9□□□□□ -2.1
HRD3YLR207W MPC1P53157 130 aaKnown RBP1.9□□□□□ -2.1
HRD3YLR207W YNL184CP53876 108 aa1.9□□□□□ -2.1
HRD3YLR207W PET191Q02772 108 aa1.9□□□□□ -2.1
HRD3YLR207W NCE101Q02820 53 aa1.9□□□□□ -2.1
HRD3YLR207W HNT1Q04344 158 aaKnown RBP1.9□□□□□ -2.1
HRD3YLR207W HTL1Q9URQ5 78 aa1.9□□□□□ -2.1
HRD3YLR207W YEL009C-AA0A023PZF2 135 aa1.9□□□□□ -2.11
HRD3YLR207W ATG22P25568 528 aa1.9□□□□□ -2.11
HRD3YLR207W UPS2P35200 230 aa1.9□□□□□ -2.11
HRD3YLR207W DOG2P38773 246 aa1.9□□□□□ -2.11
HRD3YLR207W DOG1P38774 246 aa1.9□□□□□ -2.11
HRD3YLR207W NVJ1P38881 321 aa1.9□□□□□ -2.11
HRD3YLR207W APS3P47064 194 aa1.9□□□□□ -2.11
HRD3YLR207W AKR2Q12013 749 aa1.9□□□□□ -2.11
HRD3YLR207W YMR230W-AQ3E7B5 62 aa1.9□□□□□ -2.11
HRD3YLR207W GRX2P17695 143 aaKnown RBP1.89□□□□□ -2.11
HRD3YLR207W IDP1P21954 428 aaKnown RBP1.89□□□□□ -2.11
HRD3YLR207W ARO7P32178 256 aa1.89□□□□□ -2.11
HRD3YLR207W GPI18P38211 433 aa1.89□□□□□ -2.11
HRD3YLR207W NSG1P38837 291 aa1.89□□□□□ -2.11
HRD3YLR207W ASP1P38986 381 aaPredicted RBP1.89□□□□□ -2.11
HRD3YLR207W GVP36P40531 326 aaKnown RBP1.89□□□□□ -2.11
HRD3YLR207W YJL028WP47062 111 aa1.89□□□□□ -2.11
HRD3YLR207W CAX4P53223 239 aa1.89□□□□□ -2.11
HRD3YLR207W BOR1P53838 576 aa1.89□□□□□ -2.11
HRD3YLR207W COG5P53951 403 aa1.89□□□□□ -2.11
HRD3YLR207W YDR102CQ03864 110 aa1.89□□□□□ -2.11
HRD3YLR207W SHH4Q06236 168 aa1.89□□□□□ -2.11
HRD3YLR207W YPL257WQ08974 193 aa1.89□□□□□ -2.11
HRD3YLR207W TDA8Q6B2U8 126 aa1.89□□□□□ -2.11
HRD3YLR207W HSP30P25619 332 aa1.89□□□□□ -2.11
HRD3YLR207W AHC2P25649 128 aa1.89□□□□□ -2.11
HRD3YLR207W ERG24P32462 438 aaKnown RBP1.89□□□□□ -2.11
HRD3YLR207W TIM12P32830 109 aa1.89□□□□□ -2.11
HRD3YLR207W RPS20P38701 121 aaKnown RBP1.89□□□□□ -2.11
HRD3YLR207W SPO73P40031 143 aa1.89□□□□□ -2.11
HRD3YLR207W GLE2P40066 365 aa1.89□□□□□ -2.11
HRD3YLR207W RRG9P40156 214 aa1.89□□□□□ -2.11
HRD3YLR207W MOG1P47123 218 aa1.89□□□□□ -2.11
HRD3YLR207W SAY1P53324 424 aa1.89□□□□□ -2.11
HRD3YLR207W HST4P53688 370 aa1.89□□□□□ -2.11
HRD3YLR207W IGO1P53897 168 aa1.89□□□□□ -2.11
HRD3YLR207W CGI121Q03705 181 aaKnown RBP1.89□□□□□ -2.11
HRD3YLR207W MCH1Q07376 486 aa1.89□□□□□ -2.11
HRD3YLR207W TIR4Q12218 487 aaPredicted RBP1.89□□□□□ -2.11
HRD3YLR207W YPL229WQ99395 206 aa1.89□□□□□ -2.11
HRD3YLR207W SEC4P07560 215 aaKnown RBP1.88□□□□□ -2.11
HRD3YLR207W YFR010W-AP0C5N0 62 aa1.88□□□□□ -2.11
HRD3YLR207W YOL162WP0CF19 215 aa1.88□□□□□ -2.11
HRD3YLR207W FCY2P17064 533 aa1.88□□□□□ -2.11
HRD3YLR207W MDH2P22133 377 aa1.88□□□□□ -2.11
HRD3YLR207W RRT13P40042 185 aa1.88□□□□□ -2.11
HRD3YLR207W TIR3P40552 269 aa1.88□□□□□ -2.11
HRD3YLR207W SYS1P41544 203 aa1.88□□□□□ -2.11
HRD3YLR207W YPI1P43587 155 aa1.88□□□□□ -2.11
HRD3YLR207W ECO1P43605 281 aa1.88□□□□□ -2.11
HRD3YLR207W BAT2P47176 376 aaKnown RBP1.88□□□□□ -2.11
HRD3YLR207W VMA10P48836 114 aaKnown RBP1.88□□□□□ -2.11
HRD3YLR207W PGA1P53896 198 aa1.88□□□□□ -2.11
HRD3YLR207W TMA20P89886 181 aaPredicted RBP1.88□□□□□ -2.11
HRD3YLR207W YPL039WQ03080 316 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms