RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C QDR3P38227 689 aa7.84□□□□□ -1.15
YSR3YKR053C PNC1P53184 216 aaKnown RBP7.84□□□□□ -1.15
YSR3YKR053C YGR018CP53211 109 aa7.84□□□□□ -1.15
YSR3YKR053C TIM44Q01852 431 aa7.84□□□□□ -1.15
YSR3YKR053C YHR213W-AQ8TGT4 77 aa7.84□□□□□ -1.15
YSR3YKR053C RPS8AP0CX39 200 aaKnown RBP7.83□□□□□ -1.16
YSR3YKR053C RPS8BP0CX40 200 aaKnown RBP7.83□□□□□ -1.16
YSR3YKR053C MDM10P18409 493 aa7.83□□□□□ -1.16
YSR3YKR053C IMD2P38697 523 aaKnown RBP7.83□□□□□ -1.16
YSR3YKR053C MPC2P38857 129 aa7.83□□□□□ -1.16
YSR3YKR053C BDH1P39714 382 aa7.83□□□□□ -1.16
YSR3YKR053C POR2P40478 281 aa7.83□□□□□ -1.16
YSR3YKR053C TDA6Q06466 467 aa7.83□□□□□ -1.16
YSR3YKR053C TIM18Q08749 192 aa7.83□□□□□ -1.16
YSR3YKR053C SAR1P20606 190 aaKnown RBP7.82□□□□□ -1.16
YSR3YKR053C YCR022CP25620 114 aa7.82□□□□□ -1.16
YSR3YKR053C AVT5P38176 459 aa7.82□□□□□ -1.16
YSR3YKR053C CAX4P53223 239 aa7.82□□□□□ -1.16
YSR3YKR053C DID2P69771 204 aa7.82□□□□□ -1.16
YSR3YKR053C YMR082CQ04276 118 aa7.82□□□□□ -1.16
YSR3YKR053C GRH1Q04410 372 aaKnown RBP7.82□□□□□ -1.16
YSR3YKR053C YLR281CQ05863 155 aa7.82□□□□□ -1.16
YSR3YKR053C RPS25BP0C0T4 108 aaKnown RBP7.81□□□□□ -1.16
YSR3YKR053C CSH1P38287 376 aa7.81□□□□□ -1.16
YSR3YKR053C ERV25P54837 211 aaKnown RBP7.81□□□□□ -1.16
YSR3YKR053C YDR274CP87283 123 aa7.81□□□□□ -1.16
YSR3YKR053C RPS25AQ3E792 108 aaPredicted RBP7.81□□□□□ -1.16
YSR3YKR053C PIS1P06197 220 aaKnown RBP7.8□□□□□ -1.16
YSR3YKR053C POP5P28005 173 aa7.8□□□□□ -1.16
YSR3YKR053C YJL027CP47063 138 aaPredicted RBP7.8□□□□□ -1.16
YSR3YKR053C ATG39Q06159 398 aa7.8□□□□□ -1.16
YSR3YKR053C POS5Q06892 414 aa7.8□□□□□ -1.16
YSR3YKR053C USV1Q12132 391 aa7.8□□□□□ -1.16
YSR3YKR053C YDR157WA0A023PZE8 133 aa7.79□□□□□ -1.16
YSR3YKR053C ECM33P38248 429 aaKnown RBP7.79□□□□□ -1.16
YSR3YKR053C RTS2P40962 232 aa7.79□□□□□ -1.16
YSR3YKR053C AGX1P43567 385 aa7.79□□□□□ -1.16
YSR3YKR053C YJR015WP47090 510 aa7.79□□□□□ -1.16
YSR3YKR053C LST7P53237 242 aa7.79□□□□□ -1.16
YSR3YKR053C RRG8Q06109 277 aa7.79□□□□□ -1.16
YSR3YKR053C BER1Q06688 274 aaKnown RBP7.79□□□□□ -1.16
YSR3YKR053C PRR2Q12310 699 aa7.79□□□□□ -1.16
YSR3YKR053C AGC1Q12482 902 aa7.79□□□□□ -1.16
YSR3YKR053C SWM2P40342 146 aa7.78□□□□□ -1.16
YSR3YKR053C BUL1P48524 976 aa7.78□□□□□ -1.16
YSR3YKR053C ORM1P53224 222 aa7.78□□□□□ -1.16
YSR3YKR053C SDH7Q04401 133 aa7.78□□□□□ -1.16
YSR3YKR053C YLR179CQ06252 201 aaKnown RBP7.78□□□□□ -1.16
YSR3YKR053C LDS2Q08218 356 aa7.78□□□□□ -1.16
YSR3YKR053C YPR013CQ12145 317 aa7.78□□□□□ -1.16
YSR3YKR053C TAR1Q8TGM6 124 aa7.78□□□□□ -1.16
YSR3YKR053C SNU13P39990 126 aaKnown RBP7.77□□□□□ -1.17
YSR3YKR053C YEA4P40004 342 aa7.77□□□□□ -1.17
YSR3YKR053C GET2P40056 285 aa7.77□□□□□ -1.17
YSR3YKR053C YGR269WP40326 108 aa7.77□□□□□ -1.17
YSR3YKR053C YJR111CP47148 283 aaKnown RBP7.77□□□□□ -1.17
YSR3YKR053C BOR1P53838 576 aa7.77□□□□□ -1.17
YSR3YKR053C TRI1Q05024 226 aa7.77□□□□□ -1.17
YSR3YKR053C POM34Q12445 299 aa7.77□□□□□ -1.17
YSR3YKR053C CDC7P06243 507 aa7.76□□□□□ -1.17
YSR3YKR053C YCR025CP25352 136 aa7.76□□□□□ -1.17
YSR3YKR053C UPS2P35200 230 aa7.76□□□□□ -1.17
YSR3YKR053C BOL3P39724 118 aa7.76□□□□□ -1.17
YSR3YKR053C YER137CP40083 148 aaKnown RBP7.76□□□□□ -1.17
YSR3YKR053C MSC3Q05812 728 aa7.76□□□□□ -1.17
YSR3YKR053C SNF11P38956 169 aa7.75□□□□□ -1.17
YSR3YKR053C CAF16P43569 289 aa7.75□□□□□ -1.17
YSR3YKR053C MIC27P50945 234 aa7.75□□□□□ -1.17
YSR3YKR053C HST4P53688 370 aa7.75□□□□□ -1.17
YSR3YKR053C OCA2P53949 197 aa7.75□□□□□ -1.17
YSR3YKR053C YHR213WP0CI67 198 aa7.74□□□□□ -1.17
YSR3YKR053C AUA1P32450 94 aa7.74□□□□□ -1.17
YSR3YKR053C FLO5P38894 1075 aa7.74□□□□□ -1.17
YSR3YKR053C TDA4P47153 279 aa7.74□□□□□ -1.17
YSR3YKR053C YGL117WP53133 265 aa7.74□□□□□ -1.17
YSR3YKR053C DUO1P53168 247 aaKnown RBP7.74□□□□□ -1.17
YSR3YKR053C FYV6P53913 173 aa7.74□□□□□ -1.17
YSR3YKR053C ODC1Q03028 310 aa7.74□□□□□ -1.17
YSR3YKR053C YMR316C-AI2HB70 103 aa7.73□□□□□ -1.17
YSR3YKR053C ERS1P17261 260 aa7.73□□□□□ -1.17
YSR3YKR053C PEX7P39108 375 aa7.73□□□□□ -1.17
YSR3YKR053C SAS2P40963 338 aa7.73□□□□□ -1.17
YSR3YKR053C IMP2P46972 177 aa7.73□□□□□ -1.17
YSR3YKR053C ALG13P53178 202 aa7.73□□□□□ -1.17
YSR3YKR053C FCF2Q12035 217 aaPredicted RBP7.73□□□□□ -1.17
YSR3YKR053C MAG1P22134 296 aaKnown RBP7.72□□□□□ -1.17
YSR3YKR053C GLE2P40066 365 aa7.72□□□□□ -1.17
YSR3YKR053C SHH3Q04487 196 aa7.72□□□□□ -1.17
YSR3YKR053C ANT1Q06497 328 aa7.72□□□□□ -1.17
YSR3YKR053C DFR1P07807 211 aaKnown RBP RIP-Chip data7.71□□□□□ -1.18not detected
YSR3YKR053C SIP1P32578 815 aa7.71□□□□□ -1.18
YSR3YKR053C MST28P39552 234 aa7.71□□□□□ -1.18
YSR3YKR053C SIM1P40472 476 aa7.71□□□□□ -1.18
YSR3YKR053C TAD2P47058 250 aa7.71□□□□□ -1.18
YSR3YKR053C HAM1P47119 197 aaKnown RBP7.71□□□□□ -1.18
YSR3YKR053C MST27P53176 234 aa7.71□□□□□ -1.18
YSR3YKR053C ARR3Q06598 404 aa7.71□□□□□ -1.18
YSR3YKR053C GCN3P14741 305 aa7.7□□□□□ -1.18
YSR3YKR053C QCR9P22289 66 aa7.7□□□□□ -1.18
YSR3YKR053C YBL059WP34224 193 aa7.7□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms