RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C MAK32P23060 363 aa2.78□□□□□ -1.96
YIR040CYIR040C TOA2P32774 122 aa2.78□□□□□ -1.96
YIR040CYIR040C YKL102CP34249 101 aa2.78□□□□□ -1.96
YIR040CYIR040C ECM15P35195 104 aa2.78□□□□□ -1.96
YIR040CYIR040C MRPL11P36521 249 aaPredicted RBP2.78□□□□□ -1.96
YIR040CYIR040C SDH4P37298 181 aa2.78□□□□□ -1.96
YIR040CYIR040C GEP4P38812 185 aa2.78□□□□□ -1.96
YIR040CYIR040C SAS2P40963 338 aa2.78□□□□□ -1.96
YIR040CYIR040C PFS2P42841 465 aaKnown RBP2.78□□□□□ -1.96
YIR040CYIR040C SMD3P43321 101 aaKnown RBP2.78□□□□□ -1.96
YIR040CYIR040C AIM25P47140 327 aa2.78□□□□□ -1.96
YIR040CYIR040C TDA4P47153 279 aa2.78□□□□□ -1.96
YIR040CYIR040C BAT2P47176 376 aaKnown RBP2.78□□□□□ -1.96
YIR040CYIR040C TIS11P47977 285 aa2.78□□□□□ -1.96
YIR040CYIR040C TAM41P53230 385 aa2.78□□□□□ -1.96
YIR040CYIR040C RPC11Q04307 110 aaPredicted RBP2.78□□□□□ -1.96
YIR040CYIR040C SEN15Q04675 128 aa2.78□□□□□ -1.96
YIR040CYIR040C YML053CQ04978 212 aa2.78□□□□□ -1.96
YIR040CYIR040C DGA1Q08650 418 aa2.78□□□□□ -1.96
YIR040CYIR040C PRM3Q08931 133 aa2.78□□□□□ -1.96
YIR040CYIR040C UTP10P42945 1769 aaKnown RBP2.78□□□□□ -1.96
YIR040CYIR040C GCN2P15442 1659 aa2.78□□□□□ -1.96
YIR040CYIR040C MLP2P40457 1679 aa2.78□□□□□ -1.96
YIR040CYIR040C TY1B-PR2P0C2J0 1756 aa2.77□□□□□ -1.97
YIR040CYIR040C COX1P00401 534 aa2.77□□□□□ -1.97
YIR040CYIR040C HMRA1P0CY11 126 aa2.77□□□□□ -1.97
YIR040CYIR040C RPL30P14120 105 aaKnown RBP2.77□□□□□ -1.97
YIR040CYIR040C TFS1P14306 219 aa2.77□□□□□ -1.97
YIR040CYIR040C RPL16BP26785 198 aaKnown RBP2.77□□□□□ -1.97
YIR040CYIR040C YKR070WP36151 352 aaKnown RBP2.77□□□□□ -1.97
YIR040CYIR040C MRPL39P36533 70 aa2.77□□□□□ -1.97
YIR040CYIR040C RPL32P38061 130 aaKnown RBP2.77□□□□□ -1.97
YIR040CYIR040C GPX2P38143 162 aa2.77□□□□□ -1.97
YIR040CYIR040C SDS24P38314 527 aa2.77□□□□□ -1.97
YIR040CYIR040C MBB1P39534 108 aa2.77□□□□□ -1.97
YIR040CYIR040C FLX1P40464 311 aa2.77□□□□□ -1.97
YIR040CYIR040C PAU15P40585 124 aa2.77□□□□□ -1.97
YIR040CYIR040C CUP9P41817 306 aa2.77□□□□□ -1.97
YIR040CYIR040C YFL065CP43539 102 aa2.77□□□□□ -1.97
YIR040CYIR040C VHT1P53241 593 aa2.77□□□□□ -1.97
YIR040CYIR040C HST4P53688 370 aa2.77□□□□□ -1.97
YIR040CYIR040C ALG9P53868 555 aaKnown RBP2.77□□□□□ -1.97
YIR040CYIR040C RPL22BP56628 122 aaKnown RBP2.77□□□□□ -1.97
YIR040CYIR040C YMR166CQ03829 368 aa2.77□□□□□ -1.97
YIR040CYIR040C YMR082CQ04276 118 aa2.77□□□□□ -1.97
YIR040CYIR040C RAF1Q06891 181 aa2.77□□□□□ -1.97
YIR040CYIR040C YDL218WQ07629 317 aa2.77□□□□□ -1.97
YIR040CYIR040C YDL242WQ07746 117 aa2.77□□□□□ -1.97
YIR040CYIR040C YPR203WQ08994 102 aa2.77□□□□□ -1.97
YIR040CYIR040C YDR029WQ12111 104 aa2.77□□□□□ -1.97
YIR040CYIR040C YPL119C-AQ3E751 87 aa2.77□□□□□ -1.97
YIR040CYIR040C YBR255C-AQ3E776 120 aa2.77□□□□□ -1.97
YIR040CYIR040C KOG1P38873 1557 aa2.77□□□□□ -1.97
YIR040CYIR040C ATG2P53855 1592 aa2.77□□□□□ -1.97
YIR040CYIR040C TRP1P00912 224 aa2.76□□□□□ -1.97
YIR040CYIR040C POR1P04840 283 aaKnown RBP2.76□□□□□ -1.97
YIR040CYIR040C HEM2P05373 342 aa2.76□□□□□ -1.97
YIR040CYIR040C SPO13P23624 291 aa2.76□□□□□ -1.97
YIR040CYIR040C YGL010WP25338 174 aa2.76□□□□□ -1.97
YIR040CYIR040C RFA2P26754 273 aaKnown RBP2.76□□□□□ -1.97
YIR040CYIR040C ALK2P32789 676 aaPredicted RBP2.76□□□□□ -1.97
YIR040CYIR040C SOR1P35497 357 aaKnown RBP2.76□□□□□ -1.97
YIR040CYIR040C PDX3P38075 228 aaKnown RBP2.76□□□□□ -1.97
YIR040CYIR040C SFT2P38166 215 aa2.76□□□□□ -1.97
YIR040CYIR040C YBR032WP38223 100 aa2.76□□□□□ -1.97
YIR040CYIR040C PHO89P38361 574 aa2.76□□□□□ -1.97
YIR040CYIR040C IRC22P40006 225 aa2.76□□□□□ -1.97
YIR040CYIR040C PEX17P40155 199 aa2.76□□□□□ -1.97
YIR040CYIR040C CYB5P40312 120 aa2.76□□□□□ -1.97
YIR040CYIR040C ERG25P53045 309 aa2.76□□□□□ -1.97
YIR040CYIR040C MST27P53176 234 aa2.76□□□□□ -1.97
YIR040CYIR040C YGL034CP53186 121 aa2.76□□□□□ -1.97
YIR040CYIR040C CAX4P53223 239 aa2.76□□□□□ -1.97
YIR040CYIR040C SCW4P53334 386 aaKnown RBP2.76□□□□□ -1.97
YIR040CYIR040C NUP100Q02629 959 aa2.76□□□□□ -1.97
YIR040CYIR040C SOR2Q07786 357 aa2.76□□□□□ -1.97
YIR040CYIR040C NAT5Q08689 176 aa2.76□□□□□ -1.97
YIR040CYIR040C CRC1Q12289 327 aa2.76□□□□□ -1.97
YIR040CYIR040C YPS3Q12303 508 aa2.76□□□□□ -1.97
YIR040CYIR040C RNH203Q12338 110 aa2.76□□□□□ -1.97
YIR040CYIR040C JID1Q12350 301 aa2.76□□□□□ -1.97
YIR040CYIR040C IZH2Q12442 317 aa2.76□□□□□ -1.97
YIR040CYIR040C YPR064WQ12492 139 aa2.76□□□□□ -1.97
YIR040CYIR040C DFM1Q12743 341 aaKnown RBP2.76□□□□□ -1.97
YIR040CYIR040C YPR145C-AQ2V2P0 78 aa2.76□□□□□ -1.97
YIR040CYIR040C YER175W-AQ8TGU4 54 aa2.76□□□□□ -1.97
YIR040CYIR040C HTL1Q9URQ5 78 aa2.76□□□□□ -1.97
YIR040CYIR040C ADH1P00330 348 aaKnown RBP2.75□□□□□ -1.97
YIR040CYIR040C OPI3P05375 206 aa2.75□□□□□ -1.97
YIR040CYIR040C PAU19P0CE85 124 aa2.75□□□□□ -1.97
YIR040CYIR040C PAU21P0CE86 164 aa2.75□□□□□ -1.97
YIR040CYIR040C PAU22P0CE87 164 aa2.75□□□□□ -1.97
YIR040CYIR040C PAU3P25610 124 aa2.75□□□□□ -1.97
YIR040CYIR040C YCR090CP25654 182 aaKnown RBP2.75□□□□□ -1.97
YIR040CYIR040C URA10P30402 227 aa2.75□□□□□ -1.97
YIR040CYIR040C NRG2P38082 220 aa2.75□□□□□ -1.97
YIR040CYIR040C ATX1P38636 73 aa2.75□□□□□ -1.97
YIR040CYIR040C YHR138CP38841 114 aaPredicted RBP2.75□□□□□ -1.97
YIR040CYIR040C YIL029CP40538 142 aa2.75□□□□□ -1.97
YIR040CYIR040C VMA21P41806 77 aa2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms