RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C YMR320WQ04897 101 aa2.56□□□□□ -2
MSM1YGR171C NKP2Q06162 153 aa2.56□□□□□ -2
MSM1YGR171C FSF1Q12029 327 aaKnown RBP2.56□□□□□ -2
MSM1YGR171C YPT31P38555 223 aaKnown RBP2.56□□□□□ -2
MSM1YGR171C ARC15P40518 154 aaRIP-Chip data2.56□□□□□ -2not detected
MSM1YGR171C YIR035CP40579 254 aa2.56□□□□□ -2
MSM1YGR171C OST2P46964 130 aa2.56□□□□□ -2
MSM1YGR171C YDR366CP87287 132 aa2.56□□□□□ -2
MSM1YGR171C GEP5Q12393 293 aa2.56□□□□□ -2
MSM1YGR171C YIL177CP40434 1758 aa2.55□□□□□ -2
MSM1YGR171C YJL225CP40889 1758 aa2.55□□□□□ -2
MSM1YGR171C YLR156WP0CE96 114 aa2.55□□□□□ -2
MSM1YGR171C YLR159WP0CE97 114 aa2.55□□□□□ -2
MSM1YGR171C YLR161WP0CE98 114 aa2.55□□□□□ -2
MSM1YGR171C SEC59P20048 519 aa2.55□□□□□ -2
MSM1YGR171C PAN3P36102 679 aaPredicted RBP2.55□□□□□ -2
MSM1YGR171C UTP30P36144 274 aaKnown RBP2.55□□□□□ -2
MSM1YGR171C YER134CP40081 178 aa2.55□□□□□ -2
MSM1YGR171C YPL073CP40323 161 aa2.55□□□□□ -2
MSM1YGR171C ALG9P53868 555 aaKnown RBP2.55□□□□□ -2
MSM1YGR171C TMA23Q03525 211 aa2.55□□□□□ -2
MSM1YGR171C CNL1Q06333 122 aa2.55□□□□□ -2
MSM1YGR171C IES4Q08561 116 aa2.55□□□□□ -2
MSM1YGR171C YLR412C-AQ3E742 68 aa2.55□□□□□ -2
MSM1YGR171C YLR099W-AQ3E798 87 aa2.55□□□□□ -2
MSM1YGR171C Q0255P03881 472 aa2.54□□□□□ -2
MSM1YGR171C ADK1P07170 222 aaKnown RBP2.54□□□□□ -2
MSM1YGR171C RPL30P14120 105 aaKnown RBP2.54□□□□□ -2
MSM1YGR171C SHE2P36068 246 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
MSM1YGR171C RPS20P38701 121 aaKnown RBP2.54□□□□□ -2
MSM1YGR171C TTI2P47168 421 aa2.54□□□□□ -2
MSM1YGR171C AIF1P52923 378 aa2.54□□□□□ -2
MSM1YGR171C YGR026WP53217 278 aa2.54□□□□□ -2
MSM1YGR171C YKR005CQ02203 525 aa2.54□□□□□ -2
MSM1YGR171C CGI121Q03705 181 aaKnown RBP2.54□□□□□ -2
MSM1YGR171C THI74Q04083 370 aa2.54□□□□□ -2
MSM1YGR171C SPG3Q04398 127 aaPredicted RBP2.54□□□□□ -2
MSM1YGR171C SML1Q04964 104 aa2.54□□□□□ -2
MSM1YGR171C YML100W-AQ8TGT0 57 aa2.54□□□□□ -2
MSM1YGR171C RPL9AP05738 191 aaKnown RBP2.54□□□□□ -2
MSM1YGR171C CPA1P07258 411 aaKnown RBP2.54□□□□□ -2
MSM1YGR171C ECM31P38122 312 aa2.54□□□□□ -2
MSM1YGR171C YER188WP40103 239 aa2.54□□□□□ -2
MSM1YGR171C AYR1P40471 297 aa2.54□□□□□ -2
MSM1YGR171C GLR1P41921 483 aaKnown RBP2.54□□□□□ -2
MSM1YGR171C ECO1P43605 281 aa2.54□□□□□ -2
MSM1YGR171C YFR054CP43622 192 aa2.54□□□□□ -2
MSM1YGR171C RPL9BP51401 191 aaKnown RBP2.54□□□□□ -2
MSM1YGR171C YGR039WP53225 103 aa2.54□□□□□ -2
MSM1YGR171C COF1Q03048 143 aaKnown RBP2.54□□□□□ -2
MSM1YGR171C FCF2Q12035 217 aaPredicted RBP2.54□□□□□ -2
MSM1YGR171C YPR063CQ12160 140 aa2.54□□□□□ -2
MSM1YGR171C TCB3Q03640 1545 aaKnown RBP2.53□□□□□ -2
MSM1YGR171C REP2P03872 296 aa2.53□□□□□ -2
MSM1YGR171C SGA1P08019 549 aa2.53□□□□□ -2
MSM1YGR171C PRE1P22141 198 aaKnown RBP2.53□□□□□ -2
MSM1YGR171C TKL2P33315 681 aa2.53□□□□□ -2
MSM1YGR171C YHR125WP38831 101 aa2.53□□□□□ -2
MSM1YGR171C MOB1P40484 314 aa2.53□□□□□ -2
MSM1YGR171C AIM36Q03798 255 aa2.53□□□□□ -2
MSM1YGR171C MCP1Q12106 302 aa2.53□□□□□ -2
MSM1YGR171C DGK1Q12382 290 aa2.53□□□□□ -2
MSM1YGR171C TOM40P23644 387 aaKnown RBP2.52□□□□□ -2.01
MSM1YGR171C YOL014WQ08110 124 aa2.52□□□□□ -2.01
MSM1YGR171C SCP1Q08873 200 aa2.52□□□□□ -2.01
MSM1YGR171C VAR1P02381 398 aa2.51□□□□□ -2.01
MSM1YGR171C SNC2P33328 115 aa2.51□□□□□ -2.01
MSM1YGR171C YOR062CP36025 268 aa2.51□□□□□ -2.01
MSM1YGR171C SPP41P38904 1435 aa2.51□□□□□ -2.01
MSM1YGR171C YIL059CP40520 121 aa2.51□□□□□ -2.01
MSM1YGR171C SLM2P53955 656 aa2.51□□□□□ -2.01
MSM1YGR171C DAD3P69850 94 aa2.51□□□□□ -2.01
MSM1YGR171C GRX5Q02784 150 aa2.51□□□□□ -2.01
MSM1YGR171C COA4Q05809 96 aa2.51□□□□□ -2.01
MSM1YGR171C FCY1Q12178 158 aa2.51□□□□□ -2.01
MSM1YGR171C YDL012CQ12489 107 aa2.51□□□□□ -2.01
MSM1YGR171C SAS5Q99314 248 aa2.51□□□□□ -2.01
MSM1YGR171C ATP5P09457 212 aa2.51□□□□□ -2.01
MSM1YGR171C PHO85P17157 305 aa2.51□□□□□ -2.01
MSM1YGR171C YHL026CP38740 315 aa2.51□□□□□ -2.01
MSM1YGR171C APJ1P53940 528 aa2.51□□□□□ -2.01
MSM1YGR171C DIG2Q03373 323 aaKnown RBP2.51□□□□□ -2.01
MSM1YGR171C VPS71Q03433 280 aa2.51□□□□□ -2.01
MSM1YGR171C YLR118CQ12354 227 aa2.51□□□□□ -2.01
MSM1YGR171C ODC2Q99297 307 aa2.51□□□□□ -2.01
MSM1YGR171C TIM9O74700 87 aa2.5□□□□□ -2.01
MSM1YGR171C RAD10P06838 210 aa2.5□□□□□ -2.01
MSM1YGR171C SPS2P08459 502 aa2.5□□□□□ -2.01
MSM1YGR171C YER039C-AP0CD97 72 aa2.5□□□□□ -2.01
MSM1YGR171C TIR1P10863 254 aa2.5□□□□□ -2.01
MSM1YGR171C PEX4P29340 183 aa2.5□□□□□ -2.01
MSM1YGR171C GTT1P40582 234 aa2.5□□□□□ -2.01
MSM1YGR171C YNR062CP53748 327 aa2.5□□□□□ -2.01
MSM1YGR171C AIM11P87275 137 aa2.5□□□□□ -2.01
MSM1YGR171C VPS28Q02767 242 aa2.5□□□□□ -2.01
MSM1YGR171C YMR295CQ03559 197 aa2.5□□□□□ -2.01
MSM1YGR171C MRPS8Q03799 155 aa2.5□□□□□ -2.01
MSM1YGR171C TVP18Q04767 167 aa2.5□□□□□ -2.01
MSM1YGR171C FCF1Q05498 189 aaPredicted RBP2.5□□□□□ -2.01
MSM1YGR171C YPR114WQ06107 315 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms