RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeastyeast

Gene PRP38, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP38YGR075C IRA2P19158 3079 aa1.5□□□□□ -2.17
PRP38YGR075C GEA1P47102 1408 aaPredicted RBP1.49□□□□□ -2.17
PRP38YGR075C ROM2P51862 1356 aaKnown RBP1.49□□□□□ -2.17
PRP38YGR075C KDX1P36005 433 aa1.49□□□□□ -2.17
PRP38YGR075C FMP23P38231 175 aa1.49□□□□□ -2.17
PRP38YGR075C OPY1P38271 328 aa1.49□□□□□ -2.17
PRP38YGR075C GAA1P39012 614 aa1.49□□□□□ -2.17
PRP38YGR075C LSM4P40070 187 aaKnown RBP1.49□□□□□ -2.17
PRP38YGR075C YER135CP40082 130 aa1.49□□□□□ -2.17
PRP38YGR075C ARP3P47117 449 aaKnown RBP1.49□□□□□ -2.17
PRP38YGR075C FUS2Q05670 677 aa1.49□□□□□ -2.17
PRP38YGR075C RIO1Q12196 484 aaKnown RBP1.49□□□□□ -2.17
PRP38YGR075C ODC2Q99297 307 aa1.49□□□□□ -2.17
PRP38YGR075C YCR090CP25654 182 aaKnown RBP1.48□□□□□ -2.17
PRP38YGR075C YBR209WP38311 105 aa1.48□□□□□ -2.17
PRP38YGR075C PDS1P40316 373 aaPredicted RBP1.48□□□□□ -2.17
PRP38YGR075C HOP2P53187 214 aa1.48□□□□□ -2.17
PRP38YGR075C ANT1Q06497 328 aa1.48□□□□□ -2.17
PRP38YGR075C IGO2Q9P305 131 aa1.48□□□□□ -2.17
PRP38YGR075C CPA1P07258 411 aaKnown RBP1.47□□□□□ -2.17
PRP38YGR075C RPL40AP0CH08 128 aaKnown RBP1.47□□□□□ -2.17
PRP38YGR075C RPL40BP0CH09 128 aaKnown RBP1.47□□□□□ -2.17
PRP38YGR075C SNF4P12904 322 aa1.47□□□□□ -2.17
PRP38YGR075C ATP7P30902 174 aa1.47□□□□□ -2.17
PRP38YGR075C TFC1P32367 649 aa1.47□□□□□ -2.17
PRP38YGR075C CAF4P36130 643 aa1.47□□□□□ -2.17
PRP38YGR075C SHG1P38337 142 aa1.47□□□□□ -2.17
PRP38YGR075C SER2P42941 309 aa1.47□□□□□ -2.17
PRP38YGR075C ARO8P53090 500 aaKnown RBP1.47□□□□□ -2.17
PRP38YGR075C POP3P53833 195 aaPredicted RBP1.47□□□□□ -2.17
PRP38YGR075C DYN3Q04949 312 aa1.47□□□□□ -2.17
PRP38YGR075C NOC4Q06512 552 aaPredicted RBP1.47□□□□□ -2.17
PRP38YGR075C YOL024WQ08172 172 aa1.47□□□□□ -2.17
PRP38YGR075C FAS2P19097 1887 aaKnown RBP1.47□□□□□ -2.17
PRP38YGR075C YLR236CA0A023PZG4 107 aa1.46□□□□□ -2.18
PRP38YGR075C TMA19P35691 167 aaKnown RBP1.46□□□□□ -2.18
PRP38YGR075C PAN3P36102 679 aaPredicted RBP1.46□□□□□ -2.18
PRP38YGR075C YBR219CP38317 127 aa1.46□□□□□ -2.18
PRP38YGR075C AIM2P39721 246 aa1.46□□□□□ -2.18
PRP38YGR075C YEA4P40004 342 aa1.46□□□□□ -2.18
PRP38YGR075C MPC3P53311 146 aa1.46□□□□□ -2.18
PRP38YGR075C SAY1P53324 424 aa1.46□□□□□ -2.18
PRP38YGR075C NUP49Q02199 472 aa1.46□□□□□ -2.18
PRP38YGR075C YLR162WQ06235 118 aa1.46□□□□□ -2.18
PRP38YGR075C YET3Q07451 203 aa1.46□□□□□ -2.18
PRP38YGR075C YLR031WQ07978 186 aa1.46□□□□□ -2.18
PRP38YGR075C YDL085C-AQ3E7B7 68 aaKnown RBP1.46□□□□□ -2.18
PRP38YGR075C FKS3Q04952 1785 aa1.46□□□□□ -2.18
PRP38YGR075C TAH1P25638 111 aaPredicted RBP1.45□□□□□ -2.18
PRP38YGR075C YER034WP40022 185 aaKnown RBP1.45□□□□□ -2.18
PRP38YGR075C YER134CP40081 178 aa1.45□□□□□ -2.18
PRP38YGR075C ERJ5P43613 295 aaPredicted RBP1.45□□□□□ -2.18
PRP38YGR075C YJR111CP47148 283 aaKnown RBP1.45□□□□□ -2.18
PRP38YGR075C TDA4P47153 279 aa1.45□□□□□ -2.18
PRP38YGR075C KNH1P50112 268 aa1.45□□□□□ -2.18
PRP38YGR075C NRK1P53915 240 aa1.45□□□□□ -2.18
PRP38YGR075C YMR315WQ04869 349 aaKnown RBP1.45□□□□□ -2.18
PRP38YGR075C YLR036CQ07986 203 aa1.45□□□□□ -2.18
PRP38YGR075C DGA1Q08650 418 aa1.45□□□□□ -2.18
PRP38YGR075C YRF1-3P0CX14 1859 aa1.45□□□□□ -2.18
PRP38YGR075C YRF1-7P0CX15 1859 aa1.45□□□□□ -2.18
PRP38YGR075C YRF1-6P53819 1859 aa1.45□□□□□ -2.18
PRP38YGR075C FLO9P39712 1322 aa1.44□□□□□ -2.18
PRP38YGR075C SAC3P46674 1301 aa1.44□□□□□ -2.18
PRP38YGR075C YAR023CD6VPM8 179 aa1.44□□□□□ -2.18
PRP38YGR075C POR1P04840 283 aaKnown RBP1.44□□□□□ -2.18
PRP38YGR075C SPO13P23624 291 aa1.44□□□□□ -2.18
PRP38YGR075C YGL010WP25338 174 aa1.44□□□□□ -2.18
PRP38YGR075C YKR045CP36138 183 aa1.44□□□□□ -2.18
PRP38YGR075C YBR220CP38318 560 aa1.44□□□□□ -2.18
PRP38YGR075C VMA22P38784 181 aa1.44□□□□□ -2.18
PRP38YGR075C EGD2P38879 174 aaKnown RBP1.44□□□□□ -2.18
PRP38YGR075C SNO1Q03144 224 aa1.44□□□□□ -2.18
PRP38YGR075C CUE4Q04201 117 aaPredicted RBP1.44□□□□□ -2.18
PRP38YGR075C GRX8Q05926 109 aa1.44□□□□□ -2.18
PRP38YGR075C CYR1P08678 2026 aaKnown RBP1.44□□□□□ -2.18
PRP38YGR075C GCY1P14065 312 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
PRP38YGR075C SEC11P15367 167 aa1.43□□□□□ -2.18
PRP38YGR075C SEC72P39742 193 aaKnown RBP1.43□□□□□ -2.18
PRP38YGR075C RPL13BP40212 199 aaKnown RBP1.43□□□□□ -2.18
PRP38YGR075C POG1P40473 351 aa1.43□□□□□ -2.18
PRP38YGR075C NAT3Q06504 195 aa1.43□□□□□ -2.18
PRP38YGR075C CSI2Q08054 341 aa1.43□□□□□ -2.18
PRP38YGR075C YOL014WQ08110 124 aa1.43□□□□□ -2.18
PRP38YGR075C RPL13AQ12690 199 aaPredicted RBP1.43□□□□□ -2.18
PRP38YGR075C KRE5P22023 1365 aa1.43□□□□□ -2.18
PRP38YGR075C YOL162WP0CF19 215 aa1.42□□□□□ -2.18
PRP38YGR075C PHO85P17157 305 aa1.42□□□□□ -2.18
PRP38YGR075C TRX3P25372 127 aa1.42□□□□□ -2.18
PRP38YGR075C UPS2P35200 230 aa1.42□□□□□ -2.18
PRP38YGR075C YKR041WP36134 250 aa1.42□□□□□ -2.18
PRP38YGR075C MTW1P39731 289 aa1.42□□□□□ -2.18
PRP38YGR075C FMP32P43557 207 aa1.42□□□□□ -2.18
PRP38YGR075C TMA22P47089 198 aaPredicted RBP1.42□□□□□ -2.18
PRP38YGR075C JAC1P53193 184 aa1.42□□□□□ -2.18
PRP38YGR075C PGA1P53896 198 aa1.42□□□□□ -2.18
PRP38YGR075C YMR099CQ03161 297 aaKnown RBP1.42□□□□□ -2.18
PRP38YGR075C YML100W-AQ8TGT0 57 aa1.42□□□□□ -2.18
PRP38YGR075C APC1P53886 1748 aa1.42□□□□□ -2.18
PRP38YGR075C GSC2P40989 1895 aa1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms